RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	SLC34A2	O95436	690 aa		10.65	□□□□□ -0.7
MARK3-215	ENST00000558787	RPRD2	Q5VT52	1461 aa	Known RBP	10.65	□□□□□ -0.7
MARK3-215	ENST00000558787	RIMS2	Q9UQ26	1411 aa		10.65	□□□□□ -0.7
MARK3-215	ENST00000558787	UNC13B	O14795	1591 aa		10.65	□□□□□ -0.71
MARK3-215	ENST00000558787	KDM5A	P29375	1690 aa	Known RBP	10.64	□□□□□ -0.71
MARK3-215	ENST00000558787	XIRP1	Q702N8	1843 aa	Known RBP	10.64	□□□□□ -0.71
MARK3-215	ENST00000558787	MYO5B	Q9ULV0	1848 aa		10.64	□□□□□ -0.71
MARK3-215	ENST00000558787	ZFYVE9	O95405	1425 aa		10.64	□□□□□ -0.71
MARK3-215	ENST00000558787		E9PCH4	1651 aa		10.63	□□□□□ -0.71
MARK3-215	ENST00000558787	TMEM131L	A2VDJ0	1609 aa		10.62	□□□□□ -0.71
MARK3-215	ENST00000558787	MED1	Q15648	1581 aa	Predicted RBP	10.62	□□□□□ -0.71
MARK3-215	ENST00000558787	NKX1-1	Q15270	411 aa	Predicted RBP	10.62	□□□□□ -0.71
MARK3-215	ENST00000558787	PCDHGA4	Q9Y5G9	962 aa		10.62	□□□□□ -0.71
MARK3-215	ENST00000558787	GCC2	Q8IWJ2	1684 aa		10.62	□□□□□ -0.71
MARK3-215	ENST00000558787	NUDT7	P0C024	238 aa		10.61	□□□□□ -0.71
MARK3-215	ENST00000558787	HDGF	P51858	240 aa	Known RBP	10.61	□□□□□ -0.71
MARK3-215	ENST00000558787	RTN4	Q9NQC3	1192 aa	Known RBP	10.61	□□□□□ -0.71
MARK3-215	ENST00000558787	GPHN	Q9NQX3	736 aa	Predicted RBP	10.61	□□□□□ -0.71
MARK3-215	ENST00000558787	IQGAP3	Q86VI3	1631 aa		10.61	□□□□□ -0.71
MARK3-215	ENST00000558787	PLEKHG1	Q9ULL1	1385 aa		10.61	□□□□□ -0.71
MARK3-215	ENST00000558787	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.6	□□□□□ -0.71
MARK3-215	ENST00000558787	TBX22	Q9Y458	520 aa		10.6	□□□□□ -0.71
MARK3-215	ENST00000558787	FOXK1	P85037	733 aa		10.59	□□□□□ -0.71
MARK3-215	ENST00000558787	PLPP6	Q8IY26	295 aa		10.58	□□□□□ -0.72
MARK3-215	ENST00000558787	SLAIN2	Q9P270	581 aa		10.58	□□□□□ -0.72
MARK3-215	ENST00000558787	FAM135B	Q49AJ0	1406 aa		10.58	□□□□□ -0.72
MARK3-215	ENST00000558787	ADAMTS13	Q76LX8	1427 aa		10.58	□□□□□ -0.72
MARK3-215	ENST00000558787	RRBP1	Q9P2E9	1410 aa	Known RBP	10.58	□□□□□ -0.72
MARK3-215	ENST00000558787	ZNF326	Q5BKZ1	582 aa	Known RBP	10.57	□□□□□ -0.72
MARK3-215	ENST00000558787	C14orf37	Q86TY3	774 aa		10.57	□□□□□ -0.72
MARK3-215	ENST00000558787	TRIM52	Q96A61	297 aa		10.57	□□□□□ -0.72
MARK3-215	ENST00000558787	NAIP	Q13075	1403 aa		10.57	□□□□□ -0.72
MARK3-215	ENST00000558787	NWD1	Q149M9	1564 aa		10.56	□□□□□ -0.72
MARK3-215	ENST00000558787	NKTR	P30414	1462 aa	Known RBP	10.56	□□□□□ -0.72
MARK3-215	ENST00000558787	MSH6	P52701	1360 aa		10.56	□□□□□ -0.72
MARK3-215	ENST00000558787	LHX6	Q9UPM6	363 aa		10.56	□□□□□ -0.72
MARK3-215	ENST00000558787	AMOTL2	Q9Y2J4	779 aa		10.56	□□□□□ -0.72
MARK3-215	ENST00000558787	CHD2	O14647	1828 aa	Known RBP	10.56	□□□□□ -0.72
MARK3-215	ENST00000558787	PTCD2	Q8WV60	388 aa	Known RBP	10.55	□□□□□ -0.72
MARK3-215	ENST00000558787	RGS17	Q9UGC6	210 aa	Predicted RBP	10.55	□□□□□ -0.72
MARK3-215	ENST00000558787	ROBO1	Q9Y6N7	1651 aa		10.54	□□□□□ -0.72
MARK3-215	ENST00000558787	TBC1D12	O60347	775 aa		10.54	□□□□□ -0.72
MARK3-215	ENST00000558787	DSG2	Q14126	1118 aa		10.54	□□□□□ -0.72
MARK3-215	ENST00000558787	PTPRU	Q92729	1446 aa		10.54	□□□□□ -0.72
MARK3-215	ENST00000558787	ANKRD13D	Q6ZTN6	518 aa		10.52	□□□□□ -0.73
MARK3-215	ENST00000558787	C19orf44	Q9H6X5	657 aa		10.52	□□□□□ -0.73
MARK3-215	ENST00000558787	SPHKAP	Q2M3C7	1700 aa		10.52	□□□□□ -0.73
MARK3-215	ENST00000558787	MET	P08581	1390 aa		10.52	□□□□□ -0.73
MARK3-215	ENST00000558787	CLTCL1	P53675	1640 aa		10.51	□□□□□ -0.73
MARK3-215	ENST00000558787	PSD	A5PKW4	1024 aa	Predicted RBP	10.51	□□□□□ -0.73
MARK3-215	ENST00000558787	ATF3	P18847	181 aa		10.51	□□□□□ -0.73
MARK3-215	ENST00000558787	PBX2	P40425	430 aa		10.5	□□□□□ -0.73
MARK3-215	ENST00000558787	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.5	□□□□□ -0.73
MARK3-215	ENST00000558787	PIK3R4	Q99570	1358 aa		10.5	□□□□□ -0.73
MARK3-215	ENST00000558787	HFM1	A2PYH4	1435 aa		10.5	□□□□□ -0.73
MARK3-215	ENST00000558787	TRPM2	O94759	1503 aa		10.49	□□□□□ -0.73
MARK3-215	ENST00000558787	DIP2A	Q14689	1571 aa		10.49	□□□□□ -0.73
MARK3-215	ENST00000558787	NRXN3	Q9Y4C0	1643 aa		10.49	□□□□□ -0.73
MARK3-215	ENST00000558787	GTPBP6	O43824	516 aa	Predicted RBP	10.49	□□□□□ -0.73
MARK3-215	ENST00000558787	PDE4A	P27815	886 aa		10.49	□□□□□ -0.73
MARK3-215	ENST00000558787	PTGER2	P43116	358 aa		10.49	□□□□□ -0.73
MARK3-215	ENST00000558787	POTEA	Q6S8J7	498 aa		10.49	□□□□□ -0.73
MARK3-215	ENST00000558787	CADPS2	Q86UW7	1296 aa		10.49	□□□□□ -0.73
MARK3-215	ENST00000558787	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.48	□□□□□ -0.73
MARK3-215	ENST00000558787	LSM11	P83369	360 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
MARK3-215	ENST00000558787	RNF166	Q96A37	237 aa	Predicted RBP	10.48	□□□□□ -0.73
MARK3-215	ENST00000558787	NCOA3	Q9Y6Q9	1424 aa		10.48	□□□□□ -0.73
MARK3-215	ENST00000558787	NEXMIF	Q5QGS0	1516 aa		10.48	□□□□□ -0.73
MARK3-215	ENST00000558787	SETBP1	Q9Y6X0	1596 aa		10.48	□□□□□ -0.73
MARK3-215	ENST00000558787	PHLPP1	O60346	1717 aa		10.47	□□□□□ -0.73
MARK3-215	ENST00000558787	BRINP3	Q76B58	766 aa		10.47	□□□□□ -0.73
MARK3-215	ENST00000558787	CRISPLD2	Q9H0B8	497 aa		10.47	□□□□□ -0.73
MARK3-215	ENST00000558787	DDX17	Q92841	729 aa	Known RBP	10.46	□□□□□ -0.73
MARK3-215	ENST00000558787	JCAD	Q9P266	1359 aa		10.46	□□□□□ -0.74
MARK3-215	ENST00000558787	RGL3	Q3MIN7	710 aa		10.45	□□□□□ -0.74
MARK3-215	ENST00000558787	XRN1	Q8IZH2	1706 aa	Known RBP	10.44	□□□□□ -0.74
MARK3-215	ENST00000558787	PPP1R15B	Q5SWA1	713 aa		10.44	□□□□□ -0.74
MARK3-215	ENST00000558787	MPHOSPH9	Q99550	1183 aa		10.44	□□□□□ -0.74
MARK3-215	ENST00000558787	AXIN2	Q9Y2T1	843 aa		10.44	□□□□□ -0.74
MARK3-215	ENST00000558787	KIF1B	O60333	1816 aa		10.44	□□□□□ -0.74
MARK3-215	ENST00000558787	COL16A1	Q07092	1604 aa	Predicted RBP	10.44	□□□□□ -0.74
MARK3-215	ENST00000558787	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.43	□□□□□ -0.74
MARK3-215	ENST00000558787	NUTM2E	B1AL46	878 aa	Predicted RBP	10.43	□□□□□ -0.74
MARK3-215	ENST00000558787	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.43	□□□□□ -0.74
MARK3-215	ENST00000558787	MST1R	Q04912	1400 aa		10.42	□□□□□ -0.74
MARK3-215	ENST00000558787	ROBO2	Q9HCK4	1378 aa		10.42	□□□□□ -0.74
MARK3-215	ENST00000558787	RPGRIP1L	Q68CZ1	1315 aa		10.42	□□□□□ -0.74
MARK3-215	ENST00000558787	ADGRF5	Q8IZF2	1346 aa		10.42	□□□□□ -0.74
MARK3-215	ENST00000558787	ARHGAP33	O14559	1287 aa		10.42	□□□□□ -0.74
MARK3-215	ENST00000558787	MEX3C	Q5U5Q3	659 aa	Known RBP	10.42	□□□□□ -0.74
MARK3-215	ENST00000558787	LRP6	O75581	1613 aa		10.42	□□□□□ -0.74
MARK3-215	ENST00000558787	PPP4R3B	Q5MIZ7	849 aa		10.41	□□□□□ -0.74
MARK3-215	ENST00000558787	POTEE	Q6S8J3	1075 aa		10.41	□□□□□ -0.74
MARK3-215	ENST00000558787	OXER1	Q8TDS5	423 aa		10.41	□□□□□ -0.74
MARK3-215	ENST00000558787	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
MARK3-215	ENST00000558787	STK26	Q9P289	416 aa		10.41	□□□□□ -0.74
MARK3-215	ENST00000558787	ADGRL3	Q9HAR2	1447 aa		10.41	□□□□□ -0.74
MARK3-215	ENST00000558787	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.4	□□□□□ -0.74
MARK3-215	ENST00000558787	SPATA31A6	Q5VVP1	1343 aa		10.4	□□□□□ -0.74
MARK3-215	ENST00000558787	ASXL1	Q8IXJ9	1541 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms