RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 TULP4Q9NRJ4 1543 aa22.18■■□□□ 1.14
RPL28-206ENST00000558752 PAK3O75914 559 aaPredicted RBP22.17■■□□□ 1.14
RPL28-206ENST00000558752 FAM98CQ17RN3 349 aaKnown RBP22.16■■□□□ 1.14
RPL28-206ENST00000558752 COL14A1Q05707 1796 aaKnown RBP22.16■■□□□ 1.14
RPL28-206ENST00000558752 TRPM3Q9HCF6 1732 aaPredicted RBP22.15■■□□□ 1.14
RPL28-206ENST00000558752 PRDM11Q9NQV5 511 aa22.15■■□□□ 1.14
RPL28-206ENST00000558752 PRR36Q9H6K5 1346 aa22.14■■□□□ 1.14
RPL28-206ENST00000558752 FAM182BQ5T319 152 aa22.13■■□□□ 1.13
RPL28-206ENST00000558752 ALS2Q96Q42 1657 aa22.13■■□□□ 1.13
RPL28-206ENST00000558752 NRAPQ86VF7 1730 aa22.11■■□□□ 1.13
RPL28-206ENST00000558752 SPATA31A5Q5VU36 1347 aa22.11■■□□□ 1.13
RPL28-206ENST00000558752 SPATA31A7Q8IWB4 1347 aa22.11■■□□□ 1.13
RPL28-206ENST00000558752 LRP5O75197 1615 aa22.1■■□□□ 1.13
RPL28-206ENST00000558752 EN1Q05925 392 aaPredicted RBP22.1■■□□□ 1.13
RPL28-206ENST00000558752 NUDT16Q96DE0 195 aaKnown RBP22.1■■□□□ 1.13
RPL28-206ENST00000558752 ITSN1Q15811 1721 aa22.09■■□□□ 1.13
RPL28-206ENST00000558752 ATP7BP35670 1465 aa22.06■■□□□ 1.12
RPL28-206ENST00000558752 TRIM26Q12899 539 aaPredicted RBP22.05■■□□□ 1.12
RPL28-206ENST00000558752 R3HDM1Q15032 1099 aaKnown RBP22.05■■□□□ 1.12
RPL28-206ENST00000558752 CDK19Q9BWU1 502 aa22.05■■□□□ 1.12
RPL28-206ENST00000558752 CCDC61Q9Y6R9 512 aa22.05■■□□□ 1.12
RPL28-206ENST00000558752 RGPD1P0DJD0 1748 aa22.04■■□□□ 1.12
RPL28-206ENST00000558752 KIAA0232Q92628 1395 aa22.03■■□□□ 1.12
RPL28-206ENST00000558752 EVA1CP58658 441 aa22.03■■□□□ 1.12
RPL28-206ENST00000558752 FAM196AQ6ZSG2 479 aa22.03■■□□□ 1.12
RPL28-206ENST00000558752 SPATA31A1Q5TZJ5 1347 aa22.03■■□□□ 1.12
RPL28-206ENST00000558752 ARHGEF28Q8N1W1 1705 aaKnown RBP22.03■■□□□ 1.12
RPL28-206ENST00000558752 STRN4Q9NRL3 753 aa22.02■■□□□ 1.12
RPL28-206ENST00000558752 CRYBG1Q9Y4K1 1723 aa22.01■■□□□ 1.11
RPL28-206ENST00000558752 POLR3AO14802 1390 aaPredicted RBP22■■□□□ 1.11
RPL28-206ENST00000558752 NBPF8Q3BBV2 869 aa22■■□□□ 1.11
RPL28-206ENST00000558752 ACEP12821 1306 aa22■■□□□ 1.11
RPL28-206ENST00000558752 DISP2A7MBM2 1401 aa21.99■■□□□ 1.11
RPL28-206ENST00000558752 THSD7AQ9UPZ6 1657 aa21.99■■□□□ 1.11
RPL28-206ENST00000558752 PLEKHG3A1L390 1219 aa21.99■■□□□ 1.11
RPL28-206ENST00000558752 ZC3H6P61129 1189 aaKnown RBP21.99■■□□□ 1.11
RPL28-206ENST00000558752 CHRNA2Q15822 529 aa21.99■■□□□ 1.11
RPL28-206ENST00000558752 EZH2Q15910 746 aaKnown RBP21.99■■□□□ 1.11
RPL28-206ENST00000558752 ABTB2Q8N961 1025 aa21.99■■□□□ 1.11
RPL28-206ENST00000558752 PDE3BQ13370 1112 aa21.98■■□□□ 1.11
RPL28-206ENST00000558752 NUTM2GQ5VZR2 741 aa21.97■■□□□ 1.11
RPL28-206ENST00000558752 BARGINQ6ZT62 677 aa21.97■■□□□ 1.11
RPL28-206ENST00000558752 NLRP13Q86W25 1043 aa21.96■■□□□ 1.11
RPL28-206ENST00000558752 KIAA1210Q9ULL0 1709 aa21.96■■□□□ 1.11
RPL28-206ENST00000558752 PARD3Q8TEW0 1356 aa21.96■■□□□ 1.11
RPL28-206ENST00000558752 USP35Q9P2H5 1018 aa21.95■■□□□ 1.1
RPL28-206ENST00000558752 PHRF1Q9P1Y6 1649 aaKnown RBP21.95■■□□□ 1.1
RPL28-206ENST00000558752 C11orf95C9JLR9 678 aaPredicted RBP21.94■■□□□ 1.1
RPL28-206ENST00000558752 TRIM37O94972 964 aa21.94■■□□□ 1.1
RPL28-206ENST00000558752 SRPK2P78362 688 aaKnown RBP21.94■■□□□ 1.1
RPL28-206ENST00000558752 BRD4O60885 1362 aaPredicted RBP21.94■■□□□ 1.1
RPL28-206ENST00000558752 THRAP3Q9Y2W1 955 aaKnown RBP21.93■■□□□ 1.1
RPL28-206ENST00000558752 SSH2Q76I76 1423 aa21.92■■□□□ 1.1
RPL28-206ENST00000558752 CPDO75976 1380 aa21.92■■□□□ 1.1
RPL28-206ENST00000558752 APBA3O96018 575 aa21.92■■□□□ 1.1
RPL28-206ENST00000558752 TCP11L2Q8N4U5 519 aa21.92■■□□□ 1.1
RPL28-206ENST00000558752 CAMKK2Q96RR4 588 aa21.92■■□□□ 1.1
RPL28-206ENST00000558752 CENPJQ9HC77 1338 aaPredicted RBP21.91■■□□□ 1.1
RPL28-206ENST00000558752 TOPAZ1Q8N9V7 1692 aa21.91■■□□□ 1.1
RPL28-206ENST00000558752 NBPF14Q5TI25 921 aa21.89■■□□□ 1.09
RPL28-206ENST00000558752 TNS1Q9HBL0 1735 aaKnown RBP21.89■■□□□ 1.09
RPL28-206ENST00000558752 PPIP5K1Q6PFW1 1433 aa21.89■■□□□ 1.09
RPL28-206ENST00000558752 USP19O94966 1318 aa21.88■■□□□ 1.09
RPL28-206ENST00000558752 GCP02774 474 aa21.88■■□□□ 1.09
RPL28-206ENST00000558752 LARP1Q6PKG0 1096 aaKnown RBP21.88■■□□□ 1.09
RPL28-206ENST00000558752 NBPF1Q3BBV0 1214 aa21.87■■□□□ 1.09
RPL28-206ENST00000558752 NRKQ7Z2Y5 1582 aa21.87■■□□□ 1.09
RPL28-206ENST00000558752 L3MBTL2Q969R5 705 aa21.85■■□□□ 1.09
RPL28-206ENST00000558752 CAMTA1Q9Y6Y1 1673 aa21.85■■□□□ 1.09
RPL28-206ENST00000558752 SIN3AQ96ST3 1273 aa21.84■■□□□ 1.09
RPL28-206ENST00000558752 CABP2Q9NPB3 220 aa21.84■■□□□ 1.09
RPL28-206ENST00000558752 NLRP6P59044 892 aa21.83■■□□□ 1.09
RPL28-206ENST00000558752 NEUROD1Q13562 356 aa21.83■■□□□ 1.09
RPL28-206ENST00000558752 YY1P25490 414 aa21.81■■□□□ 1.08
RPL28-206ENST00000558752 CABP1Q9NZU7 370 aa21.81■■□□□ 1.08
RPL28-206ENST00000558752 LMO7Q8WWI1 1683 aa21.81■■□□□ 1.08
RPL28-206ENST00000558752 EVC2Q86UK5 1308 aa21.8■■□□□ 1.08
RPL28-206ENST00000558752 CRB1P82279 1406 aa21.8■■□□□ 1.08
RPL28-206ENST00000558752 ZBTB7CA1YPR0 619 aa21.8■■□□□ 1.08
RPL28-206ENST00000558752 COL5A2P05997 1499 aaPredicted RBP21.79■■□□□ 1.08
RPL28-206ENST00000558752 AATKQ6ZMQ8 1374 aa21.79■■□□□ 1.08
RPL28-206ENST00000558752 ZNF692Q9BU19 519 aaPredicted RBP21.78■■□□□ 1.08
RPL28-206ENST00000558752 USP6P35125 1406 aa21.78■■□□□ 1.08
RPL28-206ENST00000558752 DDB1Q16531 1140 aa21.77■■□□□ 1.08
RPL28-206ENST00000558752 TOM1L2Q6ZVM7 507 aa21.77■■□□□ 1.08
RPL28-206ENST00000558752 CDCA7Q9BWT1 371 aaPredicted RBP21.77■■□□□ 1.08
RPL28-206ENST00000558752 OVOS2A0A0G2JMS6 1433 aa21.76■■□□□ 1.07
RPL28-206ENST00000558752 OVOS2A0A0J9YW53 1432 aa21.76■■□□□ 1.07
RPL28-206ENST00000558752 OVOS2Q6IE36 1432 aa21.76■■□□□ 1.07
RPL28-206ENST00000558752 PARP4Q9UKK3 1724 aaKnown RBP21.76■■□□□ 1.07
RPL28-206ENST00000558752 QRICH2Q9H0J4 1663 aa21.75■■□□□ 1.07
RPL28-206ENST00000558752 DCAF8L1A6NGE4 600 aa21.75■■□□□ 1.07
RPL28-206ENST00000558752 KCNH5Q8NCM2 988 aa21.75■■□□□ 1.07
RPL28-206ENST00000558752 RREB1Q92766 1687 aa21.75■■□□□ 1.07
RPL28-206ENST00000558752 SPON1Q9HCB6 807 aa21.73■■□□□ 1.07
RPL28-206ENST00000558752 PPP1R1BQ9UD71 204 aaPredicted RBP21.73■■□□□ 1.07
RPL28-206ENST00000558752 SLIT3O75094 1523 aa21.72■■□□□ 1.07
RPL28-206ENST00000558752 PLSCR1O15162 318 aa21.72■■□□□ 1.07
RPL28-206ENST00000558752 WDR17Q8IZU2 1322 aa21.71■■□□□ 1.07
RPL28-206ENST00000558752 NUP188Q5SRE5 1749 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms