RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 SPATA31A5Q5VU36 1347 aa16.74■□□□□ 0.27
CASC4-205ENST00000558735 SPATA31A7Q8IWB4 1347 aa16.74■□□□□ 0.27
CASC4-205ENST00000558735 TRPM3Q9HCF6 1732 aaPredicted RBP16.74■□□□□ 0.27
CASC4-205ENST00000558735 NBPF1Q3BBV0 1214 aa16.74■□□□□ 0.27
CASC4-205ENST00000558735 COL14A1Q05707 1796 aaKnown RBP16.74■□□□□ 0.27
CASC4-205ENST00000558735 EN1Q05925 392 aaPredicted RBP16.73■□□□□ 0.27
CASC4-205ENST00000558735 RGPD1P0DJD0 1748 aa16.73■□□□□ 0.27
CASC4-205ENST00000558735 ALS2Q96Q42 1657 aa16.72■□□□□ 0.27
CASC4-205ENST00000558735 THSD7AQ9UPZ6 1657 aa16.72■□□□□ 0.27
CASC4-205ENST00000558735 NUDT16Q96DE0 195 aaKnown RBP16.72■□□□□ 0.27
CASC4-205ENST00000558735 A0A0G2JS52 829 aa16.71■□□□□ 0.27
CASC4-205ENST00000558735 MYT1Q01538 1121 aa16.71■□□□□ 0.27
CASC4-205ENST00000558735 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.27
CASC4-205ENST00000558735 CDK19Q9BWU1 502 aa16.71■□□□□ 0.27
CASC4-205ENST00000558735 GPRASP1Q5JY77 1395 aa16.71■□□□□ 0.27
CASC4-205ENST00000558735 EIF3AQ14152 1382 aaKnown RBP16.7■□□□□ 0.26
CASC4-205ENST00000558735 R3HDM1Q15032 1099 aaKnown RBP16.69■□□□□ 0.26
CASC4-205ENST00000558735 CAMKK2Q96RR4 588 aa16.69■□□□□ 0.26
CASC4-205ENST00000558735 TNS1Q9HBL0 1735 aaKnown RBP16.68■□□□□ 0.26
CASC4-205ENST00000558735 PARD3Q8TEW0 1356 aa16.68■□□□□ 0.26
CASC4-205ENST00000558735 SIN3AQ96ST3 1273 aa16.68■□□□□ 0.26
CASC4-205ENST00000558735 TULP4Q9NRJ4 1543 aa16.67■□□□□ 0.26
CASC4-205ENST00000558735 L3MBTL2Q969R5 705 aa16.67■□□□□ 0.26
CASC4-205ENST00000558735 CRYBG1Q9Y4K1 1723 aa16.67■□□□□ 0.26
CASC4-205ENST00000558735 SPATA31A1Q5TZJ5 1347 aa16.67■□□□□ 0.26
CASC4-205ENST00000558735 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
CASC4-205ENST00000558735 FAM182BQ5T319 152 aa16.66■□□□□ 0.26
CASC4-205ENST00000558735 FAM196AQ6ZSG2 479 aa16.66■□□□□ 0.26
CASC4-205ENST00000558735 CCDC61Q9Y6R9 512 aa16.66■□□□□ 0.26
CASC4-205ENST00000558735 EZH2Q15910 746 aaKnown RBP16.65■□□□□ 0.26
CASC4-205ENST00000558735 NBPF8Q3BBV2 869 aa16.64■□□□□ 0.25
CASC4-205ENST00000558735 PRDM11Q9NQV5 511 aa16.64■□□□□ 0.25
CASC4-205ENST00000558735 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
CASC4-205ENST00000558735 ACEP12821 1306 aa16.63■□□□□ 0.25
CASC4-205ENST00000558735 ARHGEF28Q8N1W1 1705 aaKnown RBP16.62■□□□□ 0.25
CASC4-205ENST00000558735 ATP7BP35670 1465 aa16.62■□□□□ 0.25
CASC4-205ENST00000558735 TRIM37O94972 964 aa16.61■□□□□ 0.25
CASC4-205ENST00000558735 NEUROD1Q13562 356 aa16.61■□□□□ 0.25
CASC4-205ENST00000558735 BARGINQ6ZT62 677 aa16.61■□□□□ 0.25
CASC4-205ENST00000558735 KIAA0232Q92628 1395 aa16.61■□□□□ 0.25
CASC4-205ENST00000558735 NUTM2GQ5VZR2 741 aa16.6■□□□□ 0.25
CASC4-205ENST00000558735 CENPJQ9HC77 1338 aaPredicted RBP16.6■□□□□ 0.25
CASC4-205ENST00000558735 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
CASC4-205ENST00000558735 KIAA1210Q9ULL0 1709 aa16.59■□□□□ 0.25
CASC4-205ENST00000558735 APBA3O96018 575 aa16.59■□□□□ 0.25
CASC4-205ENST00000558735 CABP2Q9NPB3 220 aa16.59■□□□□ 0.25
CASC4-205ENST00000558735 SRPK2P78362 688 aaKnown RBP16.58■□□□□ 0.24
CASC4-205ENST00000558735 RREB1Q92766 1687 aa16.57■□□□□ 0.24
CASC4-205ENST00000558735 ZC3H6P61129 1189 aaKnown RBP16.56■□□□□ 0.24
CASC4-205ENST00000558735 CHRNA2Q15822 529 aa16.56■□□□□ 0.24
CASC4-205ENST00000558735 ABTB2Q8N961 1025 aa16.56■□□□□ 0.24
CASC4-205ENST00000558735 PHRF1Q9P1Y6 1649 aaKnown RBP16.56■□□□□ 0.24
CASC4-205ENST00000558735 SSH2Q76I76 1423 aa16.55■□□□□ 0.24
CASC4-205ENST00000558735 CPDO75976 1380 aa16.55■□□□□ 0.24
CASC4-205ENST00000558735 CABP1Q9NZU7 370 aa16.55■□□□□ 0.24
CASC4-205ENST00000558735 C11orf95C9JLR9 678 aaPredicted RBP16.54■□□□□ 0.24
CASC4-205ENST00000558735 PDE3BQ13370 1112 aa16.54■□□□□ 0.24
CASC4-205ENST00000558735 NBPF14Q5TI25 921 aa16.54■□□□□ 0.24
CASC4-205ENST00000558735 STRN4Q9NRL3 753 aa16.54■□□□□ 0.24
CASC4-205ENST00000558735 ITSN1Q15811 1721 aa16.53■□□□□ 0.24
CASC4-205ENST00000558735 NUP188Q5SRE5 1749 aa16.53■□□□□ 0.24
CASC4-205ENST00000558735 YY1P25490 414 aa16.53■□□□□ 0.24
CASC4-205ENST00000558735 THRAP3Q9Y2W1 955 aaKnown RBP16.53■□□□□ 0.24
CASC4-205ENST00000558735 CAMTA1Q9Y6Y1 1673 aa16.53■□□□□ 0.24
CASC4-205ENST00000558735 TCP11L2Q8N4U5 519 aa16.52■□□□□ 0.24
CASC4-205ENST00000558735 PPIP5K1Q6PFW1 1433 aa16.52■□□□□ 0.23
CASC4-205ENST00000558735 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
CASC4-205ENST00000558735 USP19O94966 1318 aa16.51■□□□□ 0.23
CASC4-205ENST00000558735 LMO7Q8WWI1 1683 aa16.51■□□□□ 0.23
CASC4-205ENST00000558735 EVA1CP58658 441 aa16.51■□□□□ 0.23
CASC4-205ENST00000558735 NLRP13Q86W25 1043 aa16.51■□□□□ 0.23
CASC4-205ENST00000558735 SPON1Q9HCB6 807 aa16.51■□□□□ 0.23
CASC4-205ENST00000558735 GCP02774 474 aa16.5■□□□□ 0.23
CASC4-205ENST00000558735 LARP1Q6PKG0 1096 aaKnown RBP16.5■□□□□ 0.23
CASC4-205ENST00000558735 KCNQ2O43526 872 aa16.49■□□□□ 0.23
CASC4-205ENST00000558735 NRKQ7Z2Y5 1582 aa16.49■□□□□ 0.23
CASC4-205ENST00000558735 USP35Q9P2H5 1018 aa16.49■□□□□ 0.23
CASC4-205ENST00000558735 EVC2Q86UK5 1308 aa16.48■□□□□ 0.23
CASC4-205ENST00000558735 TOPAZ1Q8N9V7 1692 aa16.48■□□□□ 0.23
CASC4-205ENST00000558735 ROCK2O75116 1388 aaKnown RBP16.48■□□□□ 0.23
CASC4-205ENST00000558735 PLSCR1O15162 318 aa16.47■□□□□ 0.23
CASC4-205ENST00000558735 PARP4Q9UKK3 1724 aaKnown RBP16.47■□□□□ 0.23
CASC4-205ENST00000558735 NLRP6P59044 892 aa16.46■□□□□ 0.23
CASC4-205ENST00000558735 BRD4O60885 1362 aaPredicted RBP16.46■□□□□ 0.23
CASC4-205ENST00000558735 RGPD3A6NKT7 1758 aaPredicted RBP16.46■□□□□ 0.22
CASC4-205ENST00000558735 RGPD4Q7Z3J3 1758 aa16.46■□□□□ 0.22
CASC4-205ENST00000558735 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
CASC4-205ENST00000558735 COL5A2P05997 1499 aaPredicted RBP16.45■□□□□ 0.22
CASC4-205ENST00000558735 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
CASC4-205ENST00000558735 TRPM1Q7Z4N2 1603 aa16.45■□□□□ 0.22
CASC4-205ENST00000558735 PPP1R1BQ9UD71 204 aaPredicted RBP16.44■□□□□ 0.22
CASC4-205ENST00000558735 OVOS2A0A0G2JMS6 1433 aa16.44■□□□□ 0.22
CASC4-205ENST00000558735 OVOS2A0A0J9YW53 1432 aa16.44■□□□□ 0.22
CASC4-205ENST00000558735 USP6P35125 1406 aa16.44■□□□□ 0.22
CASC4-205ENST00000558735 CRB1P82279 1406 aa16.44■□□□□ 0.22
CASC4-205ENST00000558735 OVOS2Q6IE36 1432 aa16.44■□□□□ 0.22
CASC4-205ENST00000558735 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
CASC4-205ENST00000558735 BCL9O00512 1426 aa16.43■□□□□ 0.22
CASC4-205ENST00000558735 QRICH2Q9H0J4 1663 aa16.43■□□□□ 0.22
CASC4-205ENST00000558735 CARD11Q9BXL7 1154 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms