RNA–Protein interactions for RNA: ENST00000558639.5

PSMA4-208, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3

Gene PSMA4, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-208ENST00000558639 ABCC1P33527 1531 aa11.83□□□□□ -0.52
PSMA4-208ENST00000558639 GPATCH8Q9UKJ3 1502 aaKnown RBP11.83□□□□□ -0.52
PSMA4-208ENST00000558639 SULF1Q8IWU6 871 aa11.83□□□□□ -0.52
PSMA4-208ENST00000558639 SETD1BQ9UPS6 1966 aaKnown RBP11.83□□□□□ -0.52
PSMA4-208ENST00000558639 ZNF644Q9H582 1327 aaPredicted RBP11.83□□□□□ -0.52
PSMA4-208ENST00000558639 CDC42BPAQ5VT25 1732 aa11.83□□□□□ -0.52
PSMA4-208ENST00000558639 ABCA6Q8N139 1617 aa11.82□□□□□ -0.52
PSMA4-208ENST00000558639 PSEN2P49810 448 aa11.82□□□□□ -0.52
PSMA4-208ENST00000558639 DIXDC1Q155Q3 683 aa11.82□□□□□ -0.52
PSMA4-208ENST00000558639 ZBED2Q9BTP6 218 aa11.82□□□□□ -0.52
PSMA4-208ENST00000558639 KIAA1468Q9P260 1216 aa11.82□□□□□ -0.52
PSMA4-208ENST00000558639 PREX1Q8TCU6 1659 aa11.81□□□□□ -0.52
PSMA4-208ENST00000558639 ITSN2Q9NZM3 1697 aa11.81□□□□□ -0.52
PSMA4-208ENST00000558639 ZMYM3Q14202 1370 aa11.81□□□□□ -0.52
PSMA4-208ENST00000558639 SKIV2LQ15477 1246 aaKnown RBP11.81□□□□□ -0.52
PSMA4-208ENST00000558639 KIDINS220Q9ULH0 1771 aa11.8□□□□□ -0.52
PSMA4-208ENST00000558639 LOC105371045A0A1W2PR82 267 aa11.8□□□□□ -0.52
PSMA4-208ENST00000558639 PBX2P40425 430 aa11.8□□□□□ -0.52
PSMA4-208ENST00000558639 SMAPO00193 183 aa11.79□□□□□ -0.52
PSMA4-208ENST00000558639 MARVELD3Q96A59 401 aa11.79□□□□□ -0.52
PSMA4-208ENST00000558639 TMEM134Q9H6X4 195 aa11.79□□□□□ -0.52
PSMA4-208ENST00000558639 AGLP35573 1532 aa11.79□□□□□ -0.52
PSMA4-208ENST00000558639 SYCP2Q9BX26 1530 aa11.79□□□□□ -0.52
PSMA4-208ENST00000558639 SAMD9LQ8IVG5 1584 aa11.79□□□□□ -0.52
PSMA4-208ENST00000558639 CNTLNQ9NXG0 1405 aa11.78□□□□□ -0.52
PSMA4-208ENST00000558639 C3P01024 1663 aa11.78□□□□□ -0.52
PSMA4-208ENST00000558639 SUPT6HQ7KZ85 1726 aaKnown RBP11.78□□□□□ -0.52
PSMA4-208ENST00000558639 DDX11L8A8MPP1 907 aa11.78□□□□□ -0.52
PSMA4-208ENST00000558639 C3orf80F5H4A9 247 aa11.78□□□□□ -0.52
PSMA4-208ENST00000558639 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
PSMA4-208ENST00000558639 REREQ9P2R6 1566 aa11.78□□□□□ -0.52
PSMA4-208ENST00000558639 KIAA1107Q9UPP5 1409 aa11.77□□□□□ -0.52
PSMA4-208ENST00000558639 PLEKHH2Q8IVE3 1493 aa11.77□□□□□ -0.52
PSMA4-208ENST00000558639 FAM205CA6NFA0 338 aa11.77□□□□□ -0.53
PSMA4-208ENST00000558639 HDGFP51858 240 aaKnown RBP11.77□□□□□ -0.53
PSMA4-208ENST00000558639 SLC4A5Q9BY07 1137 aa11.77□□□□□ -0.53
PSMA4-208ENST00000558639 KIF3BO15066 747 aa11.76□□□□□ -0.53
PSMA4-208ENST00000558639 RSPH4AQ5TD94 716 aa11.76□□□□□ -0.53
PSMA4-208ENST00000558639 ZNF687Q8N1G0 1237 aa11.76□□□□□ -0.53
PSMA4-208ENST00000558639 FAM163AQ96GL9 167 aaPredicted RBP11.76□□□□□ -0.53
PSMA4-208ENST00000558639 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
PSMA4-208ENST00000558639 AXIN2Q9Y2T1 843 aa11.76□□□□□ -0.53
PSMA4-208ENST00000558639 A2MP01023 1474 aa11.76□□□□□ -0.53
PSMA4-208ENST00000558639 STRCQ7RTU9 1775 aa11.75□□□□□ -0.53
PSMA4-208ENST00000558639 TSPY4P0CV99 314 aa11.75□□□□□ -0.53
PSMA4-208ENST00000558639 TSPY10P0CW01 314 aa11.75□□□□□ -0.53
PSMA4-208ENST00000558639 CD46P15529 392 aa11.75□□□□□ -0.53
PSMA4-208ENST00000558639 TBC1D2Q9BYX2 928 aa11.75□□□□□ -0.53
PSMA4-208ENST00000558639 SLC4A3P48751 1232 aa11.74□□□□□ -0.53
PSMA4-208ENST00000558639 MYSM1Q5VVJ2 828 aa11.74□□□□□ -0.53
PSMA4-208ENST00000558639 NUTM1Q86Y26 1132 aa11.74□□□□□ -0.53
PSMA4-208ENST00000558639 CEP162Q5TB80 1403 aa11.74□□□□□ -0.53
PSMA4-208ENST00000558639 ATP7AQ04656 1500 aa11.74□□□□□ -0.53
PSMA4-208ENST00000558639 FLIIQ13045 1269 aa11.73□□□□□ -0.53
PSMA4-208ENST00000558639 DMRTA1Q5VZB9 504 aa11.73□□□□□ -0.53
PSMA4-208ENST00000558639 RDH13Q8NBN7 331 aa11.73□□□□□ -0.53
PSMA4-208ENST00000558639 PTPRTO14522 1441 aa11.72□□□□□ -0.53
PSMA4-208ENST00000558639 POTEEQ6S8J3 1075 aa11.72□□□□□ -0.53
PSMA4-208ENST00000558639 WASHC2CQ9Y4E1 1318 aa11.71□□□□□ -0.53
PSMA4-208ENST00000558639 CLK2P49760 499 aaKnown RBP11.71□□□□□ -0.53
PSMA4-208ENST00000558639 FBXO31Q5XUX0 539 aaPredicted RBP11.71□□□□□ -0.53
PSMA4-208ENST00000558639 CLTCQ00610 1675 aaKnown RBP11.71□□□□□ -0.54
PSMA4-208ENST00000558639 NPATQ14207 1427 aa11.7□□□□□ -0.54
PSMA4-208ENST00000558639 DHX29Q7Z478 1369 aaKnown RBP11.7□□□□□ -0.54
PSMA4-208ENST00000558639 SPIRE2Q8WWL2 714 aa11.7□□□□□ -0.54
PSMA4-208ENST00000558639 NBPF3Q9H094 633 aa11.7□□□□□ -0.54
PSMA4-208ENST00000558639 SEPT9Q9UHD8 586 aaPredicted RBP11.7□□□□□ -0.54
PSMA4-208ENST00000558639 VPS9D1Q9Y2B5 631 aa11.7□□□□□ -0.54
PSMA4-208ENST00000558639 CAMSAP1Q5T5Y3 1602 aa11.7□□□□□ -0.54
PSMA4-208ENST00000558639 EHBP1L1Q8N3D4 1523 aa11.7□□□□□ -0.54
PSMA4-208ENST00000558639 FAM98CQ17RN3 349 aaKnown RBP11.69□□□□□ -0.54
PSMA4-208ENST00000558639 PROCA1Q8NCQ7 364 aaPredicted RBP11.69□□□□□ -0.54
PSMA4-208ENST00000558639 MBD5Q9P267 1494 aa11.69□□□□□ -0.54
PSMA4-208ENST00000558639 NCOA1Q15788 1441 aa11.69□□□□□ -0.54
PSMA4-208ENST00000558639 DISP3Q9P2K9 1392 aa11.68□□□□□ -0.54
PSMA4-208ENST00000558639 ZNF335Q9H4Z2 1342 aaPredicted RBP11.68□□□□□ -0.54
PSMA4-208ENST00000558639 TIAM1Q13009 1591 aa11.68□□□□□ -0.54
PSMA4-208ENST00000558639 SWT1Q5T5J6 900 aaKnown RBP11.68□□□□□ -0.54
PSMA4-208ENST00000558639 HS3ST6Q96QI5 342 aa11.68□□□□□ -0.54
PSMA4-208ENST00000558639 NCOA2Q15596 1464 aa11.68□□□□□ -0.54
PSMA4-208ENST00000558639 RTEL1-TNFRSF6BF6WH68 1400 aa11.68□□□□□ -0.54
PSMA4-208ENST00000558639 UBAP1LF5GYI3 381 aa11.67□□□□□ -0.54
PSMA4-208ENST00000558639 KANK4Q5T7N3 995 aaPredicted RBP11.67□□□□□ -0.54
PSMA4-208ENST00000558639 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
PSMA4-208ENST00000558639 PTPRKQ15262 1439 aa11.67□□□□□ -0.54
PSMA4-208ENST00000558639 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
PSMA4-208ENST00000558639 MROH2AA6NES4 1674 aa11.66□□□□□ -0.54
PSMA4-208ENST00000558639 ADGBQ8N7X0 1667 aa11.66□□□□□ -0.54
PSMA4-208ENST00000558639 LAPTM4BQ86VI4 370 aa11.66□□□□□ -0.54
PSMA4-208ENST00000558639 ZMYND15Q9H091 742 aa11.66□□□□□ -0.54
PSMA4-208ENST00000558639 TK2O00142 265 aa11.65□□□□□ -0.54
PSMA4-208ENST00000558639 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.65□□□□□ -0.54
PSMA4-208ENST00000558639 CCDC141Q6ZP82 1450 aa11.64□□□□□ -0.55
PSMA4-208ENST00000558639 KDM4AO75164 1064 aa11.64□□□□□ -0.55
PSMA4-208ENST00000558639 ANKLE2Q86XL3 938 aa11.64□□□□□ -0.55
PSMA4-208ENST00000558639 SLF2Q8IX21 1173 aa11.64□□□□□ -0.55
PSMA4-208ENST00000558639 THEMISQ8N1K5 641 aaPredicted RBP11.64□□□□□ -0.55
PSMA4-208ENST00000558639 CAMSAP2Q08AD1 1489 aa11.63□□□□□ -0.55
PSMA4-208ENST00000558639 PLXNC1O60486 1568 aa11.63□□□□□ -0.55
PSMA4-208ENST00000558639 USP46P62068 366 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms