RNA–Protein interactions for RNA: ENST00000558619.5

CRTC3-206, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-206ENST00000558619 SEPT12Q8IYM1 358 aa24.97■■□□□ 1.59
CRTC3-206ENST00000558619 SRCAPQ6ZRS2 3230 aa24.95■■□□□ 1.59
CRTC3-206ENST00000558619 PHRF1Q9P1Y6 1649 aaKnown RBP24.95■■□□□ 1.58
CRTC3-206ENST00000558619 NUDT16Q96DE0 195 aaKnown RBP24.95■■□□□ 1.58
CRTC3-206ENST00000558619 BLMP54132 1417 aaPredicted RBP24.95■■□□□ 1.58
CRTC3-206ENST00000558619 BTG4Q9NY30 223 aa24.94■■□□□ 1.58
CRTC3-206ENST00000558619 A0A0G2JS52 829 aa24.92■■□□□ 1.58
CRTC3-206ENST00000558619 MYT1Q01538 1121 aa24.92■■□□□ 1.58
CRTC3-206ENST00000558619 CDK19Q9BWU1 502 aa24.92■■□□□ 1.58
CRTC3-206ENST00000558619 ZRANB1Q9UGI0 708 aa24.92■■□□□ 1.58
CRTC3-206ENST00000558619 ONECUT3O60422 494 aaPredicted RBP24.9■■□□□ 1.58
CRTC3-206ENST00000558619 QRICH2Q9H0J4 1663 aa24.89■■□□□ 1.58
CRTC3-206ENST00000558619 KRT27Q7Z3Y8 459 aa24.89■■□□□ 1.58
CRTC3-206ENST00000558619 SF3B2Q13435 895 aaKnown RBP24.88■■□□□ 1.57
CRTC3-206ENST00000558619 NBPF1Q3BBV0 1214 aa24.88■■□□□ 1.57
CRTC3-206ENST00000558619 FAM98CQ17RN3 349 aaKnown RBP24.87■■□□□ 1.57
CRTC3-206ENST00000558619 PRDM11Q9NQV5 511 aa24.87■■□□□ 1.57
CRTC3-206ENST00000558619 POLR3AO14802 1390 aaPredicted RBP24.87■■□□□ 1.57
CRTC3-206ENST00000558619 ACEP12821 1306 aa24.86■■□□□ 1.57
CRTC3-206ENST00000558619 CCDC61Q9Y6R9 512 aa24.85■■□□□ 1.57
CRTC3-206ENST00000558619 KIAA0232Q92628 1395 aa24.83■■□□□ 1.57
CRTC3-206ENST00000558619 THSD7AQ9UPZ6 1657 aa24.83■■□□□ 1.57
CRTC3-206ENST00000558619 NRKQ7Z2Y5 1582 aa24.83■■□□□ 1.57
CRTC3-206ENST00000558619 CENPJQ9HC77 1338 aaPredicted RBP24.83■■□□□ 1.56
CRTC3-206ENST00000558619 NUTM2GQ5VZR2 741 aa24.82■■□□□ 1.56
CRTC3-206ENST00000558619 SPATA31A5Q5VU36 1347 aa24.82■■□□□ 1.56
CRTC3-206ENST00000558619 SPATA31A7Q8IWB4 1347 aa24.82■■□□□ 1.56
CRTC3-206ENST00000558619 RGPD1P0DJD0 1748 aa24.81■■□□□ 1.56
CRTC3-206ENST00000558619 PPIP5K1Q6PFW1 1433 aa24.81■■□□□ 1.56
CRTC3-206ENST00000558619 PLEKHG3A1L390 1219 aa24.81■■□□□ 1.56
CRTC3-206ENST00000558619 SRPK2P78362 688 aaKnown RBP24.81■■□□□ 1.56
CRTC3-206ENST00000558619 NBPF8Q3BBV2 869 aa24.81■■□□□ 1.56
CRTC3-206ENST00000558619 DEFB132Q7Z7B7 95 aa24.81■■□□□ 1.56
CRTC3-206ENST00000558619 TRPM1Q7Z4N2 1603 aa24.81■■□□□ 1.56
CRTC3-206ENST00000558619 ZC3H6P61129 1189 aaKnown RBP24.78■■□□□ 1.56
CRTC3-206ENST00000558619 CHRNA2Q15822 529 aa24.78■■□□□ 1.56
CRTC3-206ENST00000558619 ABTB2Q8N961 1025 aa24.76■■□□□ 1.55
CRTC3-206ENST00000558619 CABP2Q9NPB3 220 aa24.76■■□□□ 1.55
CRTC3-206ENST00000558619 STRN4Q9NRL3 753 aa24.76■■□□□ 1.55
CRTC3-206ENST00000558619 L3MBTL2Q969R5 705 aa24.75■■□□□ 1.55
CRTC3-206ENST00000558619 SPATA31A1Q5TZJ5 1347 aa24.74■■□□□ 1.55
CRTC3-206ENST00000558619 LMO7Q8WWI1 1683 aa24.73■■□□□ 1.55
CRTC3-206ENST00000558619 BAG6P46379 1132 aa24.73■■□□□ 1.55
CRTC3-206ENST00000558619 TNS1Q9HBL0 1735 aaKnown RBP24.72■■□□□ 1.55
CRTC3-206ENST00000558619 SSH2Q76I76 1423 aa24.71■■□□□ 1.55
CRTC3-206ENST00000558619 USP19O94966 1318 aa24.71■■□□□ 1.55
CRTC3-206ENST00000558619 FAM182BQ5T319 152 aa24.71■■□□□ 1.55
CRTC3-206ENST00000558619 SIN3AQ96ST3 1273 aa24.71■■□□□ 1.55
CRTC3-206ENST00000558619 BRD4O60885 1362 aaPredicted RBP24.69■■□□□ 1.54
CRTC3-206ENST00000558619 CAMTA1Q9Y6Y1 1673 aa24.69■■□□□ 1.54
CRTC3-206ENST00000558619 EVA1CP58658 441 aa24.69■■□□□ 1.54
CRTC3-206ENST00000558619 NEUROD1Q13562 356 aa24.69■■□□□ 1.54
CRTC3-206ENST00000558619 NLRP13Q86W25 1043 aa24.69■■□□□ 1.54
CRTC3-206ENST00000558619 ROCK2O75116 1388 aaKnown RBP24.68■■□□□ 1.54
CRTC3-206ENST00000558619 CPDO75976 1380 aa24.68■■□□□ 1.54
CRTC3-206ENST00000558619 USP35Q9P2H5 1018 aa24.68■■□□□ 1.54
CRTC3-206ENST00000558619 USP6P35125 1406 aa24.68■■□□□ 1.54
CRTC3-206ENST00000558619 EVC2Q86UK5 1308 aa24.66■■□□□ 1.54
CRTC3-206ENST00000558619 CABP1Q9NZU7 370 aa24.66■■□□□ 1.54
CRTC3-206ENST00000558619 PIK3C2AO00443 1686 aa24.66■■□□□ 1.54
CRTC3-206ENST00000558619 AKAP12Q02952 1782 aa24.65■■□□□ 1.54
CRTC3-206ENST00000558619 GCP02774 474 aa24.64■■□□□ 1.54
CRTC3-206ENST00000558619 SLIT3O75094 1523 aa24.64■■□□□ 1.53
CRTC3-206ENST00000558619 LARP1Q6PKG0 1096 aaKnown RBP24.63■■□□□ 1.53
CRTC3-206ENST00000558619 LRP5O75197 1615 aa24.63■■□□□ 1.53
CRTC3-206ENST00000558619 EN1Q05925 392 aaPredicted RBP24.62■■□□□ 1.53
CRTC3-206ENST00000558619 BARGINQ6ZT62 677 aa24.62■■□□□ 1.53
CRTC3-206ENST00000558619 COL5A2P05997 1499 aaPredicted RBP24.62■■□□□ 1.53
CRTC3-206ENST00000558619 DISP2A7MBM2 1401 aa24.61■■□□□ 1.53
CRTC3-206ENST00000558619 ZBTB7CA1YPR0 619 aa24.61■■□□□ 1.53
CRTC3-206ENST00000558619 PARP4Q9UKK3 1724 aaKnown RBP24.61■■□□□ 1.53
CRTC3-206ENST00000558619 NLRP6P59044 892 aa24.6■■□□□ 1.53
CRTC3-206ENST00000558619 FAM196AQ6ZSG2 479 aa24.6■■□□□ 1.53
CRTC3-206ENST00000558619 TCP11L2Q8N4U5 519 aa24.6■■□□□ 1.53
CRTC3-206ENST00000558619 PSDA5PKW4 1024 aaPredicted RBP24.58■■□□□ 1.53
CRTC3-206ENST00000558619 PDE3BQ13370 1112 aa24.58■■□□□ 1.53
CRTC3-206ENST00000558619 TRIM37O94972 964 aa24.57■■□□□ 1.52
CRTC3-206ENST00000558619 THRAP3Q9Y2W1 955 aaKnown RBP24.57■■□□□ 1.52
CRTC3-206ENST00000558619 CRB1P82279 1406 aa24.56■■□□□ 1.52
CRTC3-206ENST00000558619 WNK3Q9BYP7 1800 aa24.56■■□□□ 1.52
CRTC3-206ENST00000558619 COL18A1P39060 1754 aa24.54■■□□□ 1.52
CRTC3-206ENST00000558619 ZNF692Q9BU19 519 aaPredicted RBP24.54■■□□□ 1.52
CRTC3-206ENST00000558619 MON2Q7Z3U7 1717 aa24.54■■□□□ 1.52
CRTC3-206ENST00000558619 AATKQ6ZMQ8 1374 aa24.54■■□□□ 1.52
CRTC3-206ENST00000558619 RREB1Q92766 1687 aa24.53■■□□□ 1.52
CRTC3-206ENST00000558619 EZH2Q15910 746 aaKnown RBP24.53■■□□□ 1.52
CRTC3-206ENST00000558619 LRRC37A3O60309 1634 aa24.53■■□□□ 1.52
CRTC3-206ENST00000558619 RGPD5Q99666 1765 aa24.52■■□□□ 1.52
CRTC3-206ENST00000558619 TTC21BQ7Z4L5 1316 aa24.52■■□□□ 1.52
CRTC3-206ENST00000558619 APBA3O96018 575 aa24.51■■□□□ 1.51
CRTC3-206ENST00000558619 CPSF1Q10570 1443 aaKnown RBP24.51■■□□□ 1.51
CRTC3-206ENST00000558619 TTC21AQ8NDW8 1320 aa24.5■■□□□ 1.51
CRTC3-206ENST00000558619 PARD3Q8TEW0 1356 aa24.5■■□□□ 1.51
CRTC3-206ENST00000558619 NUP188Q5SRE5 1749 aa24.49■■□□□ 1.51
CRTC3-206ENST00000558619 CAMKK2Q96RR4 588 aa24.49■■□□□ 1.51
CRTC3-206ENST00000558619 KTN1Q86UP2 1357 aaKnown RBP24.49■■□□□ 1.51
CRTC3-206ENST00000558619 R3HDM1Q15032 1099 aaKnown RBP24.48■■□□□ 1.51
CRTC3-206ENST00000558619 TOM1L2Q6ZVM7 507 aa24.48■■□□□ 1.51
CRTC3-206ENST00000558619 KCNH5Q8NCM2 988 aa24.48■■□□□ 1.51
CRTC3-206ENST00000558619 TONSLQ96HA7 1378 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms