RNA–Protein interactions for RNA: ENST00000558306.1

NTRK3-210, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 5

Gene NTRK3, Length 629 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-210ENST00000558306 NBPF8Q3BBV2 869 aa14.76□□□□□ -0.05
NTRK3-210ENST00000558306 GJD4Q96KN9 370 aaPredicted RBP14.76□□□□□ -0.05
NTRK3-210ENST00000558306 TOPAZ1Q8N9V7 1692 aa14.76□□□□□ -0.05
NTRK3-210ENST00000558306 UPF1Q92900 1129 aaKnown RBP eCLIP14.75□□□□□ -0.05
NTRK3-210ENST00000558306 CCDC9Q9Y3X0 531 aaKnown RBP14.75□□□□□ -0.05
NTRK3-210ENST00000558306 SLIT2O94813 1529 aa14.75□□□□□ -0.05
NTRK3-210ENST00000558306 NWD2Q9ULI1 1742 aa14.75□□□□□ -0.05
NTRK3-210ENST00000558306 PPIP5K1Q6PFW1 1433 aa14.75□□□□□ -0.05
NTRK3-210ENST00000558306 PLCH1Q4KWH8 1693 aa14.74□□□□□ -0.05
NTRK3-210ENST00000558306 POLR3AO14802 1390 aaPredicted RBP14.74□□□□□ -0.05
NTRK3-210ENST00000558306 FAM83GA6ND36 823 aa14.73□□□□□ -0.05
NTRK3-210ENST00000558306 CARD11Q9BXL7 1154 aa14.73□□□□□ -0.05
NTRK3-210ENST00000558306 NUTM2GQ5VZR2 741 aa14.72□□□□□ -0.05
NTRK3-210ENST00000558306 ABTB2Q8N961 1025 aa14.72□□□□□ -0.05
NTRK3-210ENST00000558306 COL14A1Q05707 1796 aaKnown RBP14.71□□□□□ -0.05
NTRK3-210ENST00000558306 VPS72Q15906 364 aa14.71□□□□□ -0.05
NTRK3-210ENST00000558306 PRDM11Q9NQV5 511 aa14.71□□□□□ -0.05
NTRK3-210ENST00000558306 BTG4Q9NY30 223 aa14.71□□□□□ -0.05
NTRK3-210ENST00000558306 CABP1Q9NZU7 370 aa14.71□□□□□ -0.05
NTRK3-210ENST00000558306 ATAD2Q6PL18 1390 aa14.71□□□□□ -0.06
NTRK3-210ENST00000558306 RALGAPBQ86X10 1494 aa14.7□□□□□ -0.06
NTRK3-210ENST00000558306 CRYBG1Q9Y4K1 1723 aa14.69□□□□□ -0.06
NTRK3-210ENST00000558306 NLRP13Q86W25 1043 aa14.69□□□□□ -0.06
NTRK3-210ENST00000558306 A0A0G2JS52 829 aa14.68□□□□□ -0.06
NTRK3-210ENST00000558306 MYT1Q01538 1121 aa14.68□□□□□ -0.06
NTRK3-210ENST00000558306 BRD4O60885 1362 aaPredicted RBP14.68□□□□□ -0.06
NTRK3-210ENST00000558306 GLI3P10071 1580 aa14.68□□□□□ -0.06
NTRK3-210ENST00000558306 PHRF1Q9P1Y6 1649 aaKnown RBP14.67□□□□□ -0.06
NTRK3-210ENST00000558306 ZC3H6P61129 1189 aaKnown RBP14.67□□□□□ -0.06
NTRK3-210ENST00000558306 PCGF6Q9BYE7 350 aa14.67□□□□□ -0.06
NTRK3-210ENST00000558306 ZNF692Q9BU19 519 aaPredicted RBP14.66□□□□□ -0.06
NTRK3-210ENST00000558306 NRAPQ86VF7 1730 aa14.66□□□□□ -0.06
NTRK3-210ENST00000558306 KIAA0232Q92628 1395 aa14.65□□□□□ -0.06
NTRK3-210ENST00000558306 BRWD3Q6RI45 1802 aa14.65□□□□□ -0.06
NTRK3-210ENST00000558306 EVA1CP58658 441 aa14.65□□□□□ -0.06
NTRK3-210ENST00000558306 CHRNA2Q15822 529 aa14.65□□□□□ -0.06
NTRK3-210ENST00000558306 SEPT12Q8IYM1 358 aa14.65□□□□□ -0.06
NTRK3-210ENST00000558306 USP6P35125 1406 aa14.65□□□□□ -0.06
NTRK3-210ENST00000558306 NLRP6P59044 892 aa14.64□□□□□ -0.07
NTRK3-210ENST00000558306 SBNO2Q9Y2G9 1366 aa14.63□□□□□ -0.07
NTRK3-210ENST00000558306 STRN4Q9NRL3 753 aa14.63□□□□□ -0.07
NTRK3-210ENST00000558306 AKAP12Q02952 1782 aa14.62□□□□□ -0.07
NTRK3-210ENST00000558306 ZBTB7CA1YPR0 619 aa14.62□□□□□ -0.07
NTRK3-210ENST00000558306 ONECUT3O60422 494 aaPredicted RBP14.62□□□□□ -0.07
NTRK3-210ENST00000558306 GCP02774 474 aa14.62□□□□□ -0.07
NTRK3-210ENST00000558306 FAM98CQ17RN3 349 aaKnown RBP14.62□□□□□ -0.07
NTRK3-210ENST00000558306 CCDC125Q86Z20 511 aa14.62□□□□□ -0.07
NTRK3-210ENST00000558306 TMC1Q8TDI8 760 aa14.62□□□□□ -0.07
NTRK3-210ENST00000558306 NRKQ7Z2Y5 1582 aa14.61□□□□□ -0.07
NTRK3-210ENST00000558306 SLC24A1O60721 1099 aa14.61□□□□□ -0.07
NTRK3-210ENST00000558306 KRT27Q7Z3Y8 459 aa14.61□□□□□ -0.07
NTRK3-210ENST00000558306 USP19O94966 1318 aa14.61□□□□□ -0.07
NTRK3-210ENST00000558306 SPATA31A5Q5VU36 1347 aa14.61□□□□□ -0.07
NTRK3-210ENST00000558306 SPATA31A7Q8IWB4 1347 aa14.61□□□□□ -0.07
NTRK3-210ENST00000558306 KTN1Q86UP2 1357 aaKnown RBP14.6□□□□□ -0.07
NTRK3-210ENST00000558306 SF3B2Q13435 895 aaKnown RBP14.59□□□□□ -0.07
NTRK3-210ENST00000558306 HDGFL2Q7Z4V5 671 aaPredicted RBP14.59□□□□□ -0.07
NTRK3-210ENST00000558306 TTC21BQ7Z4L5 1316 aa14.59□□□□□ -0.07
NTRK3-210ENST00000558306 TTC21AQ8NDW8 1320 aa14.59□□□□□ -0.07
NTRK3-210ENST00000558306 CPDO75976 1380 aa14.59□□□□□ -0.07
NTRK3-210ENST00000558306 ST20-MTHFSA0A0A6YYL1 179 aa14.58□□□□□ -0.08
NTRK3-210ENST00000558306 USP35Q9P2H5 1018 aa14.58□□□□□ -0.08
NTRK3-210ENST00000558306 TIMELESSQ9UNS1 1208 aa14.58□□□□□ -0.08
NTRK3-210ENST00000558306 CLSPNQ9HAW4 1339 aa14.58□□□□□ -0.08
NTRK3-210ENST00000558306 PIK3C2AO00443 1686 aa14.58□□□□□ -0.08
NTRK3-210ENST00000558306 SSH2Q76I76 1423 aa14.58□□□□□ -0.08
NTRK3-210ENST00000558306 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
NTRK3-210ENST00000558306 TERF2IPQ9NYB0 399 aa14.57□□□□□ -0.08
NTRK3-210ENST00000558306 SPATA31A1Q5TZJ5 1347 aa14.57□□□□□ -0.08
NTRK3-210ENST00000558306 CPSF1Q10570 1443 aaKnown RBP14.57□□□□□ -0.08
NTRK3-210ENST00000558306 MON2Q7Z3U7 1717 aa14.56□□□□□ -0.08
NTRK3-210ENST00000558306 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.56□□□□□ -0.08
NTRK3-210ENST00000558306 PUS7Q96PZ0 661 aaKnown RBP14.56□□□□□ -0.08
NTRK3-210ENST00000558306 CAMTA1Q9Y6Y1 1673 aa14.55□□□□□ -0.08
NTRK3-210ENST00000558306 SOX12O15370 315 aa14.55□□□□□ -0.08
NTRK3-210ENST00000558306 SLC12A5Q9H2X9 1139 aa14.55□□□□□ -0.08
NTRK3-210ENST00000558306 BLMP54132 1417 aaPredicted RBP14.55□□□□□ -0.08
NTRK3-210ENST00000558306 SLIT3O75094 1523 aa14.55□□□□□ -0.08
NTRK3-210ENST00000558306 LARP1Q6PKG0 1096 aaKnown RBP14.54□□□□□ -0.08
NTRK3-210ENST00000558306 CCER1Q8TC90 406 aaPredicted RBP14.54□□□□□ -0.08
NTRK3-210ENST00000558306 LMO7Q8WWI1 1683 aa14.54□□□□□ -0.08
NTRK3-210ENST00000558306 TMF1P82094 1093 aa14.53□□□□□ -0.08
NTRK3-210ENST00000558306 TCP11L2Q8N4U5 519 aa14.53□□□□□ -0.08
NTRK3-210ENST00000558306 TESK2Q96S53 571 aa14.53□□□□□ -0.08
NTRK3-210ENST00000558306 AATKQ6ZMQ8 1374 aa14.52□□□□□ -0.08
NTRK3-210ENST00000558306 USP47Q96K76 1375 aa14.52□□□□□ -0.08
NTRK3-210ENST00000558306 PDE3BQ13370 1112 aa14.52□□□□□ -0.09
NTRK3-210ENST00000558306 BARGINQ6ZT62 677 aa14.52□□□□□ -0.09
NTRK3-210ENST00000558306 THSD7AQ9UPZ6 1657 aa14.52□□□□□ -0.09
NTRK3-210ENST00000558306 COL5A2P05997 1499 aaPredicted RBP14.51□□□□□ -0.09
NTRK3-210ENST00000558306 NINLQ9Y2I6 1382 aa14.51□□□□□ -0.09
NTRK3-210ENST00000558306 TOM1L2Q6ZVM7 507 aa14.51□□□□□ -0.09
NTRK3-210ENST00000558306 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
NTRK3-210ENST00000558306 THRAP3Q9Y2W1 955 aaKnown RBP14.51□□□□□ -0.09
NTRK3-210ENST00000558306 RGPD5Q99666 1765 aa14.5□□□□□ -0.09
NTRK3-210ENST00000558306 EP400Q96L91 3159 aa14.5□□□□□ -0.09
NTRK3-210ENST00000558306 CDCA8Q53HL2 280 aa14.5□□□□□ -0.09
NTRK3-210ENST00000558306 FAM182BQ5T319 152 aa14.5□□□□□ -0.09
NTRK3-210ENST00000558306 ARHGEF25Q86VW2 580 aa14.5□□□□□ -0.09
NTRK3-210ENST00000558306 NME9Q86XW9 330 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms