RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 TIMELESSQ9UNS1 1208 aa7.56□□□□□ -1.2
LRRC28-205ENST00000558248 TTC24A2A3L6 582 aaPredicted RBP7.55□□□□□ -1.2
LRRC28-205ENST00000558248 PER1O15534 1290 aaPredicted RBP7.55□□□□□ -1.2
LRRC28-205ENST00000558248 ARMC2Q8NEN0 867 aa7.55□□□□□ -1.2
LRRC28-205ENST00000558248 MAP10Q9P2G4 905 aa7.55□□□□□ -1.2
LRRC28-205ENST00000558248 FAM187AA6NFU0 413 aa7.54□□□□□ -1.2
LRRC28-205ENST00000558248 AP1G2O75843 785 aa7.54□□□□□ -1.2
LRRC28-205ENST00000558248 F12P00748 615 aaPredicted RBP7.54□□□□□ -1.2
LRRC28-205ENST00000558248 RC3H1Q5TC82 1133 aaKnown RBP7.54□□□□□ -1.2
LRRC28-205ENST00000558248 EHBP1Q8NDI1 1231 aa7.54□□□□□ -1.2
LRRC28-205ENST00000558248 DGAT1O75907 488 aa7.53□□□□□ -1.2
LRRC28-205ENST00000558248 LINC01559Q495D7 138 aa7.53□□□□□ -1.2
LRRC28-205ENST00000558248 NBPF14Q5TI25 921 aa7.53□□□□□ -1.2
LRRC28-205ENST00000558248 ZNF511Q8NB15 262 aa7.53□□□□□ -1.2
LRRC28-205ENST00000558248 PNMA1Q8ND90 353 aa7.53□□□□□ -1.2
LRRC28-205ENST00000558248 MRGPRX2Q96LB1 330 aa7.53□□□□□ -1.2
LRRC28-205ENST00000558248 CCDC180Q9P1Z9 1646 aa7.52□□□□□ -1.2
LRRC28-205ENST00000558248 RFC5P40937 340 aa7.52□□□□□ -1.21
LRRC28-205ENST00000558248 SKOR1P84550 965 aa7.52□□□□□ -1.21
LRRC28-205ENST00000558248 CTDSPL2Q05D32 466 aa7.52□□□□□ -1.21
LRRC28-205ENST00000558248 TMEM259Q4ZIN3 620 aa7.52□□□□□ -1.21
LRRC28-205ENST00000558248 SNIP1Q8TAD8 396 aaKnown RBP7.52□□□□□ -1.21
LRRC28-205ENST00000558248 BAP1Q92560 729 aa7.52□□□□□ -1.21
LRRC28-205ENST00000558248 SH3BP2P78314 561 aa7.51□□□□□ -1.21
LRRC28-205ENST00000558248 AGERQ15109 404 aa7.51□□□□□ -1.21
LRRC28-205ENST00000558248 TOR4AQ9NXH8 423 aa7.5□□□□□ -1.21
LRRC28-205ENST00000558248 USP17L8P0C7I0 530 aa7.49□□□□□ -1.21
LRRC28-205ENST00000558248 VARSP26640 1264 aaKnown RBP7.49□□□□□ -1.21
LRRC28-205ENST00000558248 TRAF7Q6Q0C0 670 aa7.49□□□□□ -1.21
LRRC28-205ENST00000558248 BPHLQ86WA6 291 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-205ENST00000558248 LRRN4Q8WUT4 740 aa7.49□□□□□ -1.21
LRRC28-205ENST00000558248 GPKOWQ92917 476 aaPredicted RBP eCLIP7.49□□□□□ -1.21
LRRC28-205ENST00000558248 FAM174AQ8TBP5 190 aa7.48□□□□□ -1.21
LRRC28-205ENST00000558248 APBB1O00213 710 aa7.47□□□□□ -1.21
LRRC28-205ENST00000558248 ALDH1A1P00352 501 aa7.47□□□□□ -1.21
LRRC28-205ENST00000558248 HOMEZQ8IX15 550 aa7.47□□□□□ -1.21
LRRC28-205ENST00000558248 WASF2Q9Y6W5 498 aa7.47□□□□□ -1.21
LRRC28-205ENST00000558248 ZC3H4Q9UPT8 1303 aaKnown RBP7.47□□□□□ -1.21
LRRC28-205ENST00000558248 FBXO31Q5XUX0 539 aaPredicted RBP7.46□□□□□ -1.22
LRRC28-205ENST00000558248 FKBPLQ9UIM3 349 aa7.46□□□□□ -1.22
LRRC28-205ENST00000558248 NR6A1Q15406 480 aa7.45□□□□□ -1.22
LRRC28-205ENST00000558248 CTC1Q2NKJ3 1217 aa7.45□□□□□ -1.22
LRRC28-205ENST00000558248 MAGEB6P1A0A0J9YX57 407 aa7.44□□□□□ -1.22
LRRC28-205ENST00000558248 SMPD1P17405 629 aa7.44□□□□□ -1.22
LRRC28-205ENST00000558248 BANK1Q8NDB2 785 aa7.44□□□□□ -1.22
LRRC28-205ENST00000558248 FOXJ1Q92949 421 aa7.44□□□□□ -1.22
LRRC28-205ENST00000558248 J3QL48 77 aa7.43□□□□□ -1.22
LRRC28-205ENST00000558248 SIAH2O43255 324 aa7.43□□□□□ -1.22
LRRC28-205ENST00000558248 AVPP01185 164 aa7.43□□□□□ -1.22
LRRC28-205ENST00000558248 MYT1Q01538 1121 aa7.43□□□□□ -1.22
LRRC28-205ENST00000558248 PDXDC2PQ6P474 469 aa7.43□□□□□ -1.22
LRRC28-205ENST00000558248 TLL2Q9Y6L7 1015 aa7.43□□□□□ -1.22
LRRC28-205ENST00000558248 AXIN1O15169 862 aa7.42□□□□□ -1.22
LRRC28-205ENST00000558248 PTK2Q05397 1052 aa7.42□□□□□ -1.22
LRRC28-205ENST00000558248 ARID5BQ14865 1188 aa7.42□□□□□ -1.22
LRRC28-205ENST00000558248 MPNDQ8N594 471 aa7.42□□□□□ -1.22
LRRC28-205ENST00000558248 ARHGAP9Q9BRR9 750 aa7.42□□□□□ -1.22
LRRC28-205ENST00000558248 CARD14Q9BXL6 1004 aa7.42□□□□□ -1.22
LRRC28-205ENST00000558248 HMX1Q9NP08 348 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-205ENST00000558248 SH3BP5LQ7L8J4 393 aa7.41□□□□□ -1.22
LRRC28-205ENST00000558248 ZBTB33Q86T24 672 aa7.41□□□□□ -1.22
LRRC28-205ENST00000558248 CRIPAKQ8N1N5 446 aa7.41□□□□□ -1.22
LRRC28-205ENST00000558248 GPSM3Q9Y4H4 160 aa7.41□□□□□ -1.22
LRRC28-205ENST00000558248 ADH1CP00326 375 aa7.4□□□□□ -1.22
LRRC28-205ENST00000558248 SH3RF1Q7Z6J0 888 aa7.4□□□□□ -1.22
LRRC28-205ENST00000558248 SLC10A4Q96EP9 437 aa7.4□□□□□ -1.22
LRRC28-205ENST00000558248 PRM3Q9NNZ6 103 aa7.4□□□□□ -1.22
LRRC28-205ENST00000558248 RB1CC1Q8TDY2 1594 aa7.4□□□□□ -1.22
LRRC28-205ENST00000558248 SOCS7O14512 581 aa7.39□□□□□ -1.23
LRRC28-205ENST00000558248 SMCPP49901 116 aaPredicted RBP7.39□□□□□ -1.23
LRRC28-205ENST00000558248 C4orf48Q5BLP8 95 aa7.39□□□□□ -1.23
LRRC28-205ENST00000558248 C1QTNF2Q9BXJ5 285 aa7.39□□□□□ -1.23
LRRC28-205ENST00000558248 AAASQ9NRG9 546 aa7.39□□□□□ -1.23
LRRC28-205ENST00000558248 CDV3Q9UKY7 258 aaKnown RBP7.39□□□□□ -1.23
LRRC28-205ENST00000558248 GTF3C3Q9Y5Q9 886 aa7.39□□□□□ -1.23
LRRC28-205ENST00000558248 ST8SIA5O15466 376 aa7.38□□□□□ -1.23
LRRC28-205ENST00000558248 NR5A1Q13285 461 aa7.38□□□□□ -1.23
LRRC28-205ENST00000558248 NNTQ13423 1086 aa7.38□□□□□ -1.23
LRRC28-205ENST00000558248 VASH1Q7L8A9 365 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-205ENST00000558248 TRMT44Q8IYL2 757 aaKnown RBP7.38□□□□□ -1.23
LRRC28-205ENST00000558248 EPS8L1Q8TE68 723 aa7.38□□□□□ -1.23
LRRC28-205ENST00000558248 HPS1Q92902 700 aa7.38□□□□□ -1.23
LRRC28-205ENST00000558248 CDK15Q96Q40 435 aa7.38□□□□□ -1.23
LRRC28-205ENST00000558248 LCE2BO14633 110 aa7.37□□□□□ -1.23
LRRC28-205ENST00000558248 RANGAP1P46060 587 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-205ENST00000558248 ERFEQ4G0M1 354 aa7.37□□□□□ -1.23
LRRC28-205ENST00000558248 TRIM34Q9BYJ4 488 aa7.37□□□□□ -1.23
LRRC28-205ENST00000558248 MAP4K5Q9Y4K4 846 aa7.37□□□□□ -1.23
LRRC28-205ENST00000558248 NDUFB9Q9Y6M9 179 aa7.37□□□□□ -1.23
LRRC28-205ENST00000558248 CAPN5O15484 640 aaPredicted RBP7.35□□□□□ -1.23
LRRC28-205ENST00000558248 FSHRP23945 695 aa7.35□□□□□ -1.23
LRRC28-205ENST00000558248 NBPF20Q3BBV1 942 aa7.35□□□□□ -1.23
LRRC28-205ENST00000558248 MTMR14Q8NCE2 650 aa7.35□□□□□ -1.23
LRRC28-205ENST00000558248 ADAM32Q8TC27 787 aa7.35□□□□□ -1.23
LRRC28-205ENST00000558248 ZNF592Q92610 1267 aa7.35□□□□□ -1.23
LRRC28-205ENST00000558248 GJD4Q96KN9 370 aaPredicted RBP7.35□□□□□ -1.23
LRRC28-205ENST00000558248 ZBBXA8MT70 800 aa7.34□□□□□ -1.23
LRRC28-205ENST00000558248 ZNF787Q6DD87 383 aa7.34□□□□□ -1.23
LRRC28-205ENST00000558248 DZIP3Q86Y13 1208 aaKnown RBP7.34□□□□□ -1.23
LRRC28-205ENST00000558248 ZNF330Q9Y3S2 320 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms