RNA–Protein interactions for RNA: ENST00000558217.5

SEC11A-205, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 2

Gene SEC11A, Length 882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-205ENST00000558217 PMFBP1Q8TBY8 1022 aa19.01■□□□□ 0.63
SEC11A-205ENST00000558217 PRR36Q9H6K5 1346 aa19■□□□□ 0.63
SEC11A-205ENST00000558217 UPF1Q92900 1129 aaKnown RBP eCLIP19■□□□□ 0.634e-7■■■■□ 26.3
SEC11A-205ENST00000558217 ATP7BP35670 1465 aa18.99■□□□□ 0.63
SEC11A-205ENST00000558217 GPRASP1Q5JY77 1395 aa18.99■□□□□ 0.63
SEC11A-205ENST00000558217 NWD2Q9ULI1 1742 aa18.99■□□□□ 0.63
SEC11A-205ENST00000558217 SLIT2O94813 1529 aa18.99■□□□□ 0.63
SEC11A-205ENST00000558217 PLCH1Q4KWH8 1693 aa18.98■□□□□ 0.63
SEC11A-205ENST00000558217 TOPAZ1Q8N9V7 1692 aa18.98■□□□□ 0.63
SEC11A-205ENST00000558217 HAP1P54257 671 aaPredicted RBP18.97■□□□□ 0.63
SEC11A-205ENST00000558217 NBPF1Q3BBV0 1214 aa18.96■□□□□ 0.63
SEC11A-205ENST00000558217 LMOD2Q6P5Q4 547 aa18.96■□□□□ 0.63
SEC11A-205ENST00000558217 TRPM1Q7Z4N2 1603 aa18.96■□□□□ 0.63
SEC11A-205ENST00000558217 UNC5CLQ8IV45 518 aa18.95■□□□□ 0.62
SEC11A-205ENST00000558217 NGDNQ8NEJ9 315 aaKnown RBP18.95■□□□□ 0.62
SEC11A-205ENST00000558217 NUDT16Q96DE0 195 aaKnown RBP18.95■□□□□ 0.62
SEC11A-205ENST00000558217 CRYBG1Q9Y4K1 1723 aa18.94■□□□□ 0.62
SEC11A-205ENST00000558217 L3MBTL2Q969R5 705 aa18.94■□□□□ 0.62
SEC11A-205ENST00000558217 QRICH2Q9H0J4 1663 aa18.94■□□□□ 0.62
SEC11A-205ENST00000558217 CABLES1Q8TDN4 633 aa18.93■□□□□ 0.62
SEC11A-205ENST00000558217 GJD4Q96KN9 370 aaPredicted RBP18.93■□□□□ 0.62
SEC11A-205ENST00000558217 CDK19Q9BWU1 502 aa18.93■□□□□ 0.62
SEC11A-205ENST00000558217 SIN3AQ96ST3 1273 aa18.92■□□□□ 0.62
SEC11A-205ENST00000558217 GLI3P10071 1580 aa18.91■□□□□ 0.62
SEC11A-205ENST00000558217 CENPJQ9HC77 1338 aaPredicted RBP18.91■□□□□ 0.62
SEC11A-205ENST00000558217 ATAD2Q6PL18 1390 aa18.91■□□□□ 0.62
SEC11A-205ENST00000558217 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
SEC11A-205ENST00000558217 POLA2Q14181 598 aa18.9■□□□□ 0.62
SEC11A-205ENST00000558217 POLR3AO14802 1390 aaPredicted RBP18.9■□□□□ 0.62
SEC11A-205ENST00000558217 RALGAPBQ86X10 1494 aa18.9■□□□□ 0.62
SEC11A-205ENST00000558217 NRAPQ86VF7 1730 aa18.89■□□□□ 0.61
SEC11A-205ENST00000558217 CCDC61Q9Y6R9 512 aa18.89■□□□□ 0.61
SEC11A-205ENST00000558217 PAK3O75914 559 aaPredicted RBP18.88■□□□□ 0.61
SEC11A-205ENST00000558217 PLEKHG5O94827 1062 aa18.88■□□□□ 0.61
SEC11A-205ENST00000558217 NEUROD1Q13562 356 aa18.88■□□□□ 0.61
SEC11A-205ENST00000558217 PLEKHG3A1L390 1219 aa18.87■□□□□ 0.61
SEC11A-205ENST00000558217 VPS72Q15906 364 aa18.87■□□□□ 0.61
SEC11A-205ENST00000558217 PHRF1Q9P1Y6 1649 aaKnown RBP18.87■□□□□ 0.61
SEC11A-205ENST00000558217 ACEP12821 1306 aa18.86■□□□□ 0.61
SEC11A-205ENST00000558217 FAM83GA6ND36 823 aa18.86■□□□□ 0.61
SEC11A-205ENST00000558217 BRWD3Q6RI45 1802 aa18.86■□□□□ 0.61
SEC11A-205ENST00000558217 SRPK2P78362 688 aaKnown RBP18.84■□□□□ 0.61
SEC11A-205ENST00000558217 NBPF8Q3BBV2 869 aa18.84■□□□□ 0.61
SEC11A-205ENST00000558217 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.61
SEC11A-205ENST00000558217 ROCK2O75116 1388 aaKnown RBP18.83■□□□□ 0.61
SEC11A-205ENST00000558217 EP400Q96L91 3159 aa18.83■□□□□ 0.6
SEC11A-205ENST00000558217 BRD4O60885 1362 aaPredicted RBP18.81■□□□□ 0.6
SEC11A-205ENST00000558217 ONECUT3O60422 494 aaPredicted RBP18.8■□□□□ 0.6
SEC11A-205ENST00000558217 CCDC125Q86Z20 511 aa18.8■□□□□ 0.6
SEC11A-205ENST00000558217 CABP2Q9NPB3 220 aa18.8■□□□□ 0.6
SEC11A-205ENST00000558217 BTG4Q9NY30 223 aa18.8■□□□□ 0.6
SEC11A-205ENST00000558217 CCDC9Q9Y3X0 531 aaKnown RBP18.8■□□□□ 0.6
SEC11A-205ENST00000558217 EVC2Q86UK5 1308 aa18.79■□□□□ 0.6
SEC11A-205ENST00000558217 TRIM26Q12899 539 aaPredicted RBP18.79■□□□□ 0.6
SEC11A-205ENST00000558217 PRDM11Q9NQV5 511 aa18.78■□□□□ 0.6
SEC11A-205ENST00000558217 NRKQ7Z2Y5 1582 aa18.77■□□□□ 0.6
SEC11A-205ENST00000558217 SEPT12Q8IYM1 358 aa18.77■□□□□ 0.6
SEC11A-205ENST00000558217 ABTB2Q8N961 1025 aa18.76■□□□□ 0.59
SEC11A-205ENST00000558217 KIAA0232Q92628 1395 aa18.76■□□□□ 0.59
SEC11A-205ENST00000558217 TONSLQ96HA7 1378 aa18.76■□□□□ 0.59
SEC11A-205ENST00000558217 NUTM2GQ5VZR2 741 aa18.75■□□□□ 0.59
SEC11A-205ENST00000558217 AKAP12Q02952 1782 aa18.75■□□□□ 0.59
SEC11A-205ENST00000558217 USP19O94966 1318 aa18.74■□□□□ 0.59
SEC11A-205ENST00000558217 USP6P35125 1406 aa18.74■□□□□ 0.59
SEC11A-205ENST00000558217 CABP1Q9NZU7 370 aa18.74■□□□□ 0.59
SEC11A-205ENST00000558217 SBNO2Q9Y2G9 1366 aa18.73■□□□□ 0.59
SEC11A-205ENST00000558217 NLRP13Q86W25 1043 aa18.73■□□□□ 0.59
SEC11A-205ENST00000558217 SPATA31A5Q5VU36 1347 aa18.73■□□□□ 0.59
SEC11A-205ENST00000558217 SPATA31A7Q8IWB4 1347 aa18.73■□□□□ 0.59
SEC11A-205ENST00000558217 CPDO75976 1380 aa18.72■□□□□ 0.59
SEC11A-205ENST00000558217 BLMP54132 1417 aaPredicted RBP18.72■□□□□ 0.59
SEC11A-205ENST00000558217 LMO7Q8WWI1 1683 aa18.72■□□□□ 0.59
SEC11A-205ENST00000558217 THSD7AQ9UPZ6 1657 aa18.72■□□□□ 0.59
SEC11A-205ENST00000558217 ZC3H6P61129 1189 aaKnown RBP18.71■□□□□ 0.59
SEC11A-205ENST00000558217 FAM98CQ17RN3 349 aaKnown RBP18.71■□□□□ 0.59
SEC11A-205ENST00000558217 KRT27Q7Z3Y8 459 aa18.71■□□□□ 0.59
SEC11A-205ENST00000558217 PIK3C2AO00443 1686 aa18.7■□□□□ 0.58
SEC11A-205ENST00000558217 CHRNA2Q15822 529 aa18.7■□□□□ 0.58
SEC11A-205ENST00000558217 SSH2Q76I76 1423 aa18.7■□□□□ 0.58
SEC11A-205ENST00000558217 CARD11Q9BXL7 1154 aa18.7■□□□□ 0.58
SEC11A-205ENST00000558217 A0A0G2JS52 829 aa18.69■□□□□ 0.58
SEC11A-205ENST00000558217 MYT1Q01538 1121 aa18.69■□□□□ 0.58
SEC11A-205ENST00000558217 ZNF692Q9BU19 519 aaPredicted RBP18.69■□□□□ 0.58
SEC11A-205ENST00000558217 SLIT3O75094 1523 aa18.69■□□□□ 0.58
SEC11A-205ENST00000558217 GCP02774 474 aa18.68■□□□□ 0.58
SEC11A-205ENST00000558217 SPATA31A1Q5TZJ5 1347 aa18.68■□□□□ 0.58
SEC11A-205ENST00000558217 CAMTA1Q9Y6Y1 1673 aa18.67■□□□□ 0.58
SEC11A-205ENST00000558217 MON2Q7Z3U7 1717 aa18.67■□□□□ 0.58
SEC11A-205ENST00000558217 NLRP6P59044 892 aa18.66■□□□□ 0.58
SEC11A-205ENST00000558217 STRN4Q9NRL3 753 aa18.66■□□□□ 0.58
SEC11A-205ENST00000558217 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
SEC11A-205ENST00000558217 EVA1CP58658 441 aa18.65■□□□□ 0.58
SEC11A-205ENST00000558217 SF3B2Q13435 895 aaKnown RBP18.65■□□□□ 0.58
SEC11A-205ENST00000558217 RGPD1P0DJD0 1748 aa18.65■□□□□ 0.58
SEC11A-205ENST00000558217 TTC21AQ8NDW8 1320 aa18.64■□□□□ 0.57
SEC11A-205ENST00000558217 TTC21BQ7Z4L5 1316 aa18.63■□□□□ 0.57
SEC11A-205ENST00000558217 KTN1Q86UP2 1357 aaKnown RBP18.62■□□□□ 0.57
SEC11A-205ENST00000558217 COL5A2P05997 1499 aaPredicted RBP18.62■□□□□ 0.57
SEC11A-205ENST00000558217 COL18A1P39060 1754 aa18.62■□□□□ 0.57
SEC11A-205ENST00000558217 USP54Q70EL1 1684 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms