RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 A2ML1A8K2U0 1454 aa10.69□□□□□ -0.7
TRPM1-206ENST00000558212 EYA1Q99502 592 aa10.69□□□□□ -0.7
TRPM1-206ENST00000558212 PLXNC1O60486 1568 aa10.69□□□□□ -0.7
TRPM1-206ENST00000558212 SHANK2Q9UPX8 1470 aa10.68□□□□□ -0.7
TRPM1-206ENST00000558212 POLR1AO95602 1720 aaPredicted RBP10.68□□□□□ -0.7
TRPM1-206ENST00000558212 SSTR3P32745 418 aaPredicted RBP10.68□□□□□ -0.7
TRPM1-206ENST00000558212 RBM46Q8TBY0 533 aaKnown RBP10.68□□□□□ -0.7
TRPM1-206ENST00000558212 LRRIQ1Q96JM4 1722 aa10.67□□□□□ -0.7
TRPM1-206ENST00000558212 DNMT1P26358 1616 aaKnown RBP10.67□□□□□ -0.7
TRPM1-206ENST00000558212 C14orf37Q86TY3 774 aa10.67□□□□□ -0.7
TRPM1-206ENST00000558212 ARHGAP35Q9NRY4 1499 aa10.67□□□□□ -0.7
TRPM1-206ENST00000558212 CDC42BPAQ5VT25 1732 aa10.67□□□□□ -0.7
TRPM1-206ENST00000558212 SPAG9O60271 1321 aaKnown RBP10.66□□□□□ -0.7
TRPM1-206ENST00000558212 NEURL4Q96JN8 1562 aa10.66□□□□□ -0.7
TRPM1-206ENST00000558212 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.66□□□□□ -0.7
TRPM1-206ENST00000558212 TRIM6-TRIM34B2RNG4 842 aa10.66□□□□□ -0.7
TRPM1-206ENST00000558212 C3orf80F5H4A9 247 aa10.66□□□□□ -0.7
TRPM1-206ENST00000558212 ONECUT3O60422 494 aaPredicted RBP10.66□□□□□ -0.7
TRPM1-206ENST00000558212 SH3D19Q5HYK7 790 aa10.66□□□□□ -0.7
TRPM1-206ENST00000558212 NLRP7Q8WX94 980 aa10.66□□□□□ -0.7
TRPM1-206ENST00000558212 ATP7AQ04656 1500 aa10.66□□□□□ -0.7
TRPM1-206ENST00000558212 ALKQ9UM73 1620 aa10.66□□□□□ -0.7
TRPM1-206ENST00000558212 SYCP2Q9BX26 1530 aa10.65□□□□□ -0.7
TRPM1-206ENST00000558212 LHX8Q68G74 356 aa10.65□□□□□ -0.7
TRPM1-206ENST00000558212 A2MP01023 1474 aa10.65□□□□□ -0.7
TRPM1-206ENST00000558212 CCDC18Q5T9S5 1454 aa10.65□□□□□ -0.7
TRPM1-206ENST00000558212 INO80Q9ULG1 1556 aaPredicted RBP10.65□□□□□ -0.71
TRPM1-206ENST00000558212 VWDEQ8N2E2 1590 aa10.64□□□□□ -0.71
TRPM1-206ENST00000558212 KIAA1107Q9UPP5 1409 aa10.62□□□□□ -0.71
TRPM1-206ENST00000558212 RCCD1A6NED2 376 aa10.62□□□□□ -0.71
TRPM1-206ENST00000558212 GGT6Q6P531 493 aa10.62□□□□□ -0.71
TRPM1-206ENST00000558212 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
TRPM1-206ENST00000558212 PLEKHH2Q8IVE3 1493 aa10.61□□□□□ -0.71
TRPM1-206ENST00000558212 ADGBQ8N7X0 1667 aa10.61□□□□□ -0.71
TRPM1-206ENST00000558212 NBPF26B4DH59 902 aa10.61□□□□□ -0.71
TRPM1-206ENST00000558212 POTEEQ6S8J3 1075 aa10.61□□□□□ -0.71
TRPM1-206ENST00000558212 ZBED2Q9BTP6 218 aa10.61□□□□□ -0.71
TRPM1-206ENST00000558212 MED14O60244 1454 aa10.61□□□□□ -0.71
TRPM1-206ENST00000558212 DEPDC5O75140 1603 aa10.6□□□□□ -0.71
TRPM1-206ENST00000558212 RNF17Q9BXT8 1623 aaKnown RBP10.6□□□□□ -0.71
TRPM1-206ENST00000558212 NUDT18Q6ZVK8 323 aa10.6□□□□□ -0.71
TRPM1-206ENST00000558212 ANKLE2Q86XL3 938 aa10.6□□□□□ -0.71
TRPM1-206ENST00000558212 TATDN2Q93075 761 aa10.6□□□□□ -0.71
TRPM1-206ENST00000558212 KCNK17Q96T54 332 aa10.6□□□□□ -0.71
TRPM1-206ENST00000558212 ZNF777Q9ULD5 760 aaPredicted RBP10.6□□□□□ -0.71
TRPM1-206ENST00000558212 TNRQ92752 1358 aa10.6□□□□□ -0.71
TRPM1-206ENST00000558212 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
TRPM1-206ENST00000558212 FAM135AQ9P2D6 1515 aa10.59□□□□□ -0.71
TRPM1-206ENST00000558212 UBTFP17480 764 aaKnown RBP10.59□□□□□ -0.71
TRPM1-206ENST00000558212 HNRNPMP52272 730 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRPM1-206ENST00000558212 PROX2Q3B8N5 592 aa10.59□□□□□ -0.71
TRPM1-206ENST00000558212 SLC4A5Q9BY07 1137 aa10.59□□□□□ -0.71
TRPM1-206ENST00000558212 TMEM134Q9H6X4 195 aa10.59□□□□□ -0.71
TRPM1-206ENST00000558212 SYNMO15061 1565 aa10.59□□□□□ -0.71
TRPM1-206ENST00000558212 NPHP4O75161 1426 aaPredicted RBP10.58□□□□□ -0.72
TRPM1-206ENST00000558212 GPATCH8Q9UKJ3 1502 aaKnown RBP10.58□□□□□ -0.72
TRPM1-206ENST00000558212 PZPP20742 1482 aa10.58□□□□□ -0.72
TRPM1-206ENST00000558212 DNAJB2P25686 324 aa10.58□□□□□ -0.72
TRPM1-206ENST00000558212 SKIV2LQ15477 1246 aaKnown RBP10.58□□□□□ -0.72
TRPM1-206ENST00000558212 PACS2Q86VP3 889 aa10.58□□□□□ -0.72
TRPM1-206ENST00000558212 RSPH6AQ9H0K4 717 aa10.58□□□□□ -0.72
TRPM1-206ENST00000558212 RGS17Q9UGC6 210 aaPredicted RBP10.58□□□□□ -0.72
TRPM1-206ENST00000558212 NLRP1Q9C000 1473 aa10.57□□□□□ -0.72
TRPM1-206ENST00000558212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.57□□□□□ -0.72
TRPM1-206ENST00000558212 ST18O60284 1047 aa10.57□□□□□ -0.72
TRPM1-206ENST00000558212 CD46P15529 392 aa10.57□□□□□ -0.72
TRPM1-206ENST00000558212 HOMEZQ8IX15 550 aa10.57□□□□□ -0.72
TRPM1-206ENST00000558212 THEMISQ8N1K5 641 aaPredicted RBP10.57□□□□□ -0.72
TRPM1-206ENST00000558212 PNMA3Q9UL41 463 aa10.57□□□□□ -0.72
TRPM1-206ENST00000558212 LRRC7Q96NW7 1537 aa10.57□□□□□ -0.72
TRPM1-206ENST00000558212 IQGAP1P46940 1657 aa10.57□□□□□ -0.72
TRPM1-206ENST00000558212 PCMTD1Q96MG8 357 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-206ENST00000558212 KDM5DQ9BY66 1539 aa10.56□□□□□ -0.72
TRPM1-206ENST00000558212 UGGT1Q9NYU2 1555 aa10.56□□□□□ -0.72
TRPM1-206ENST00000558212 ARHGAP33O14559 1287 aa10.55□□□□□ -0.72
TRPM1-206ENST00000558212 PSEN2P49810 448 aa10.55□□□□□ -0.72
TRPM1-206ENST00000558212 VARS2Q5ST30 1063 aaKnown RBP10.55□□□□□ -0.72
TRPM1-206ENST00000558212 MYSM1Q5VVJ2 828 aa10.55□□□□□ -0.72
TRPM1-206ENST00000558212 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRPM1-206ENST00000558212 FYCO1Q9BQS8 1478 aa10.55□□□□□ -0.72
TRPM1-206ENST00000558212 STRCP1A6NGW2 1772 aa10.54□□□□□ -0.72
TRPM1-206ENST00000558212 RTEL1-TNFRSF6BF6WH68 1400 aa10.54□□□□□ -0.72
TRPM1-206ENST00000558212 FBXO31Q5XUX0 539 aaPredicted RBP10.54□□□□□ -0.72
TRPM1-206ENST00000558212 MIA2Q96PC5 1412 aa10.54□□□□□ -0.72
TRPM1-206ENST00000558212 CFDP1Q9UEE9 299 aaPredicted RBP10.54□□□□□ -0.72
TRPM1-206ENST00000558212 ERBB3P21860 1342 aa10.54□□□□□ -0.72
TRPM1-206ENST00000558212 DHX29Q7Z478 1369 aaKnown RBP10.53□□□□□ -0.72
TRPM1-206ENST00000558212 PBX2P40425 430 aa10.53□□□□□ -0.72
TRPM1-206ENST00000558212 SULF1Q8IWU6 871 aa10.53□□□□□ -0.72
TRPM1-206ENST00000558212 RABGEF1Q9UJ41 708 aa10.53□□□□□ -0.72
TRPM1-206ENST00000558212 CCNB3Q8WWL7 1395 aa10.52□□□□□ -0.72
TRPM1-206ENST00000558212 DIXDC1Q155Q3 683 aa10.52□□□□□ -0.73
TRPM1-206ENST00000558212 TBC1D2Q9BYX2 928 aa10.52□□□□□ -0.73
TRPM1-206ENST00000558212 KIAA1468Q9P260 1216 aa10.52□□□□□ -0.73
TRPM1-206ENST00000558212 SMAPO00193 183 aa10.51□□□□□ -0.73
TRPM1-206ENST00000558212 ZNF687Q8N1G0 1237 aa10.51□□□□□ -0.73
TRPM1-206ENST00000558212 FLIIQ13045 1269 aa10.5□□□□□ -0.73
TRPM1-206ENST00000558212 DMRTA1Q5VZB9 504 aa10.5□□□□□ -0.73
TRPM1-206ENST00000558212 POTEAQ6S8J7 498 aa10.5□□□□□ -0.73
TRPM1-206ENST00000558212 WASHC2CQ9Y4E1 1318 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms