RNA–Protein interactions for RNA: ENST00000557860.1

ACTC1-202, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 3

Gene ACTC1, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-202ENST00000557860 BRINP3Q76B58 766 aa8.52□□□□□ -1.05
ACTC1-202ENST00000557860 KIF1BO60333 1816 aa8.52□□□□□ -1.05
ACTC1-202ENST00000557860 SPATA31A6Q5VVP1 1343 aa8.52□□□□□ -1.05
ACTC1-202ENST00000557860 CLTCL1P53675 1640 aa8.51□□□□□ -1.05
ACTC1-202ENST00000557860 AHDC1Q5TGY3 1603 aaPredicted RBP8.51□□□□□ -1.05
ACTC1-202ENST00000557860 NUTM2BA6NNL0 878 aaPredicted RBP8.51□□□□□ -1.05
ACTC1-202ENST00000557860 NUTM2EB1AL46 878 aaPredicted RBP8.51□□□□□ -1.05
ACTC1-202ENST00000557860 IRX5P78411 483 aaPredicted RBP8.51□□□□□ -1.05
ACTC1-202ENST00000557860 NUTM2AQ8IVF1 878 aaPredicted RBP8.51□□□□□ -1.05
ACTC1-202ENST00000557860 PDCD7Q8N8D1 485 aaKnown RBP8.51□□□□□ -1.05
ACTC1-202ENST00000557860 WDR70Q9NW82 654 aa8.51□□□□□ -1.05
ACTC1-202ENST00000557860 SETBP1Q9Y6X0 1596 aa8.51□□□□□ -1.05
ACTC1-202ENST00000557860 XRN1Q8IZH2 1706 aaKnown RBP8.51□□□□□ -1.05
ACTC1-202ENST00000557860 SHPRHQ149N8 1683 aa8.5□□□□□ -1.05
ACTC1-202ENST00000557860 TRIM52Q96A61 297 aa8.5□□□□□ -1.05
ACTC1-202ENST00000557860 NEXMIFQ5QGS0 1516 aa8.49□□□□□ -1.05
ACTC1-202ENST00000557860 NAIPQ13075 1403 aa8.49□□□□□ -1.05
ACTC1-202ENST00000557860 ZNF772Q68DY9 489 aaPredicted RBP8.49□□□□□ -1.05
ACTC1-202ENST00000557860 DPY19L2Q6NUT2 758 aa8.49□□□□□ -1.05
ACTC1-202ENST00000557860 DDX17Q92841 729 aaKnown RBP8.49□□□□□ -1.05
ACTC1-202ENST00000557860 DCCP43146 1447 aa8.48□□□□□ -1.05
ACTC1-202ENST00000557860 MST1RQ04912 1400 aa8.48□□□□□ -1.05
ACTC1-202ENST00000557860 RRBP1Q9P2E9 1410 aaKnown RBP8.48□□□□□ -1.05
ACTC1-202ENST00000557860 PELP1Q8IZL8 1130 aaKnown RBP8.48□□□□□ -1.05
ACTC1-202ENST00000557860 OCEL1Q9H607 264 aa8.48□□□□□ -1.05
ACTC1-202ENST00000557860 NALCNQ8IZF0 1738 aa8.48□□□□□ -1.05
ACTC1-202ENST00000557860 ASXL1Q8IXJ9 1541 aa8.48□□□□□ -1.05
ACTC1-202ENST00000557860 NHSL1Q5SYE7 1610 aa8.47□□□□□ -1.05
ACTC1-202ENST00000557860 LRRC59Q96AG4 307 aaKnown RBP8.47□□□□□ -1.05
ACTC1-202ENST00000557860 ADGRL3Q9HAR2 1447 aa8.46□□□□□ -1.05
ACTC1-202ENST00000557860 PDE4AP27815 886 aa8.46□□□□□ -1.06
ACTC1-202ENST00000557860 RXRBP28702 533 aa8.46□□□□□ -1.06
ACTC1-202ENST00000557860 NBR1Q14596 966 aa8.46□□□□□ -1.06
ACTC1-202ENST00000557860 CRISPLD2Q9H0B8 497 aa8.46□□□□□ -1.06
ACTC1-202ENST00000557860 AFF2P51816 1311 aa8.46□□□□□ -1.06
ACTC1-202ENST00000557860 SETD5Q9C0A6 1442 aa8.46□□□□□ -1.06
ACTC1-202ENST00000557860 UPF1Q92900 1129 aaKnown RBP eCLIP8.45□□□□□ -1.06
ACTC1-202ENST00000557860 PPLO60437 1756 aa8.44□□□□□ -1.06
ACTC1-202ENST00000557860 PLCG2P16885 1265 aa8.44□□□□□ -1.06
ACTC1-202ENST00000557860 MFSD10Q14728 455 aa8.44□□□□□ -1.06
ACTC1-202ENST00000557860 MICALL2Q8IY33 904 aa8.44□□□□□ -1.06
ACTC1-202ENST00000557860 KCNV2Q8TDN2 545 aa8.44□□□□□ -1.06
ACTC1-202ENST00000557860 C8orf37Q96NL8 207 aa8.44□□□□□ -1.06
ACTC1-202ENST00000557860 ORAI2Q96SN7 254 aa8.44□□□□□ -1.06
ACTC1-202ENST00000557860 LARP6Q9BRS8 491 aaKnown RBP8.44□□□□□ -1.06
ACTC1-202ENST00000557860 PNPLA6Q8IY17 1366 aa8.44□□□□□ -1.06
ACTC1-202ENST00000557860 ROBO2Q9HCK4 1378 aa8.44□□□□□ -1.06
ACTC1-202ENST00000557860 HFM1A2PYH4 1435 aa8.44□□□□□ -1.06
ACTC1-202ENST00000557860 C1orf167Q5SNV9 1468 aa8.44□□□□□ -1.06
ACTC1-202ENST00000557860 ADAMTS2O95450 1211 aa8.43□□□□□ -1.06
ACTC1-202ENST00000557860 QTRT2Q9H974 415 aaKnown RBP8.43□□□□□ -1.06
ACTC1-202ENST00000557860 RPGRIP1LQ68CZ1 1315 aa8.43□□□□□ -1.06
ACTC1-202ENST00000557860 RGL3Q3MIN7 710 aa8.42□□□□□ -1.06
ACTC1-202ENST00000557860 SLC39A7Q92504 469 aa8.42□□□□□ -1.06
ACTC1-202ENST00000557860 NGLY1Q96IV0 654 aa8.42□□□□□ -1.06
ACTC1-202ENST00000557860 TMEM121BQ9BXQ6 578 aaPredicted RBP8.42□□□□□ -1.06
ACTC1-202ENST00000557860 PTCH1Q13635 1447 aa8.42□□□□□ -1.06
ACTC1-202ENST00000557860 SOS2Q07890 1332 aaPredicted RBP8.41□□□□□ -1.06
ACTC1-202ENST00000557860 C7P10643 843 aa8.41□□□□□ -1.06
ACTC1-202ENST00000557860 E2F4Q16254 413 aa8.41□□□□□ -1.06
ACTC1-202ENST00000557860 COLQQ9Y215 455 aaPredicted RBP8.41□□□□□ -1.06
ACTC1-202ENST00000557860 BOLA1Q9Y3E2 137 aa8.41□□□□□ -1.06
ACTC1-202ENST00000557860 LAMC1P11047 1609 aa8.4□□□□□ -1.06
ACTC1-202ENST00000557860 ADGRF5Q8IZF2 1346 aa8.4□□□□□ -1.06
ACTC1-202ENST00000557860 SEC24BO95487 1268 aa8.4□□□□□ -1.06
ACTC1-202ENST00000557860 RBM6P78332 1123 aaKnown RBP8.4□□□□□ -1.06
ACTC1-202ENST00000557860 ESCO1Q5FWF5 840 aa8.4□□□□□ -1.06
ACTC1-202ENST00000557860 DDX27Q96GQ7 796 aaKnown RBP8.4□□□□□ -1.06
ACTC1-202ENST00000557860 L3MBTL3Q96JM7 780 aaPredicted RBP8.4□□□□□ -1.06
ACTC1-202ENST00000557860 STK26Q9P289 416 aa8.4□□□□□ -1.06
ACTC1-202ENST00000557860 CDK12Q9NYV4 1490 aaPredicted RBP8.39□□□□□ -1.07
ACTC1-202ENST00000557860 NUTM2FA1L443 756 aa8.39□□□□□ -1.07
ACTC1-202ENST00000557860 POTEFA5A3E0 1075 aa8.39□□□□□ -1.07
ACTC1-202ENST00000557860 XPCQ01831 940 aaPredicted RBP8.39□□□□□ -1.07
ACTC1-202ENST00000557860 TMEM132EQ6IEE7 984 aa8.39□□□□□ -1.07
ACTC1-202ENST00000557860 WAPLQ7Z5K2 1190 aa8.39□□□□□ -1.07
ACTC1-202ENST00000557860 MPHOSPH9Q99550 1183 aa8.39□□□□□ -1.07
ACTC1-202ENST00000557860 GPHNQ9NQX3 736 aaPredicted RBP8.39□□□□□ -1.07
ACTC1-202ENST00000557860 CCDC144AA2RUR9 1427 aa8.38□□□□□ -1.07
ACTC1-202ENST00000557860 G3V3G9 751 aa8.38□□□□□ -1.07
ACTC1-202ENST00000557860 FOXO3O43524 673 aa8.38□□□□□ -1.07
ACTC1-202ENST00000557860 ARHGEF1Q92888 912 aaKnown RBP8.38□□□□□ -1.07
ACTC1-202ENST00000557860 USP21Q9UK80 565 aa8.38□□□□□ -1.07
ACTC1-202ENST00000557860 RGS12O14924 1447 aa8.37□□□□□ -1.07
ACTC1-202ENST00000557860 PRAG1Q86YV5 1406 aa8.37□□□□□ -1.07
ACTC1-202ENST00000557860 METRNQ9UJH8 293 aa8.37□□□□□ -1.07
ACTC1-202ENST00000557860 IFT172Q9UG01 1749 aa8.37□□□□□ -1.07
ACTC1-202ENST00000557860 SPATA31E1Q6ZUB1 1445 aa8.37□□□□□ -1.07
ACTC1-202ENST00000557860 NPHP3Q7Z494 1330 aa8.36□□□□□ -1.07
ACTC1-202ENST00000557860 TRPC5Q9UL62 973 aaPredicted RBP8.36□□□□□ -1.07
ACTC1-202ENST00000557860 COL22A1Q8NFW1 1626 aaPredicted RBP8.36□□□□□ -1.07
ACTC1-202ENST00000557860 ANKRD30BQ9BXX2 1392 aa8.35□□□□□ -1.07
ACTC1-202ENST00000557860 PLEKHH1Q9ULM0 1364 aa8.35□□□□□ -1.07
ACTC1-202ENST00000557860 CDC42BPGQ6DT37 1551 aa8.35□□□□□ -1.07
ACTC1-202ENST00000557860 RGPD8O14715 1765 aaPredicted RBP8.35□□□□□ -1.07
ACTC1-202ENST00000557860 MARF1Q9Y4F3 1742 aaKnown RBP8.35□□□□□ -1.07
ACTC1-202ENST00000557860 PXDNQ92626 1479 aa8.35□□□□□ -1.07
ACTC1-202ENST00000557860 CAMK2BQ13554 666 aa8.35□□□□□ -1.07
ACTC1-202ENST00000557860 PPP1R15BQ5SWA1 713 aa8.35□□□□□ -1.07
ACTC1-202ENST00000557860 LHX8Q68G74 356 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms