RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 DAXXQ9UER7 740 aaPredicted RBP17.05■□□□□ 0.32
CPNE6-204ENST00000557829 USP32Q8NFA0 1604 aa17.05■□□□□ 0.32
CPNE6-204ENST00000557829 CCDC146Q8IYE0 955 aa17.05■□□□□ 0.32
CPNE6-204ENST00000557829 FAM135BQ49AJ0 1406 aa17.05■□□□□ 0.32
CPNE6-204ENST00000557829 CPS1P31327 1500 aa17.05■□□□□ 0.32
CPNE6-204ENST00000557829 DIP2AQ14689 1571 aa17.04■□□□□ 0.32
CPNE6-204ENST00000557829 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
CPNE6-204ENST00000557829 CARD14Q9BXL6 1004 aa17.04■□□□□ 0.32
CPNE6-204ENST00000557829 AMOTL2Q9Y2J4 779 aa17.04■□□□□ 0.32
CPNE6-204ENST00000557829 SHPRHQ149N8 1683 aa17.04■□□□□ 0.32
CPNE6-204ENST00000557829 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
CPNE6-204ENST00000557829 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.32
CPNE6-204ENST00000557829 SLC12A5Q9H2X9 1139 aa17.02■□□□□ 0.32
CPNE6-204ENST00000557829 NPHP4O75161 1426 aaPredicted RBP17.02■□□□□ 0.32
CPNE6-204ENST00000557829 SRPK2P78362 688 aaKnown RBP17.02■□□□□ 0.31
CPNE6-204ENST00000557829 CDK19Q9BWU1 502 aa17.02■□□□□ 0.31
CPNE6-204ENST00000557829 PUS7Q96PZ0 661 aaKnown RBP17.01■□□□□ 0.31
CPNE6-204ENST00000557829 BCAR3O75815 825 aa17■□□□□ 0.31
CPNE6-204ENST00000557829 MAPK8IP3Q9UPT6 1336 aa17■□□□□ 0.31
CPNE6-204ENST00000557829 NFKBIBQ15653 356 aa16.99■□□□□ 0.31
CPNE6-204ENST00000557829 ZNF335Q9H4Z2 1342 aaPredicted RBP16.99■□□□□ 0.31
CPNE6-204ENST00000557829 NSD3Q9BZ95 1437 aa16.99■□□□□ 0.31
CPNE6-204ENST00000557829 KCNA6P17658 529 aa16.99■□□□□ 0.31
CPNE6-204ENST00000557829 WWC1Q8IX03 1113 aa16.99■□□□□ 0.31
CPNE6-204ENST00000557829 PTCH1Q13635 1447 aa16.98■□□□□ 0.31
CPNE6-204ENST00000557829 PRKCSHP14314 528 aaPredicted RBP16.98■□□□□ 0.31
CPNE6-204ENST00000557829 DMRT2Q9Y5R5 561 aa16.98■□□□□ 0.31
CPNE6-204ENST00000557829 PIK3R4Q99570 1358 aa16.98■□□□□ 0.31
CPNE6-204ENST00000557829 XRN1Q8IZH2 1706 aaKnown RBP16.97■□□□□ 0.31
CPNE6-204ENST00000557829 IQSEC2Q5JU85 1478 aa16.97■□□□□ 0.31
CPNE6-204ENST00000557829 WASLO00401 505 aaPredicted RBP16.96■□□□□ 0.31
CPNE6-204ENST00000557829 GSE1Q14687 1217 aa16.96■□□□□ 0.31
CPNE6-204ENST00000557829 WDR63Q8IWG1 891 aa16.96■□□□□ 0.31
CPNE6-204ENST00000557829 RUNDC1Q96C34 613 aa16.96■□□□□ 0.31
CPNE6-204ENST00000557829 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
CPNE6-204ENST00000557829 RGS3P49796 1198 aa16.96■□□□□ 0.31
CPNE6-204ENST00000557829 CLUAP1Q96AJ1 413 aa16.96■□□□□ 0.31
CPNE6-204ENST00000557829 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.95■□□□□ 0.3
CPNE6-204ENST00000557829 ATAD2Q6PL18 1390 aa16.95■□□□□ 0.3
CPNE6-204ENST00000557829 CCDC27Q2M243 656 aa16.95■□□□□ 0.3
CPNE6-204ENST00000557829 STRCP1A6NGW2 1772 aa16.95■□□□□ 0.3
CPNE6-204ENST00000557829 IGHDP01880 384 aa16.94■□□□□ 0.3
CPNE6-204ENST00000557829 LTBP4Q8N2S1 1624 aa16.94■□□□□ 0.3
CPNE6-204ENST00000557829 MORC1Q86VD1 984 aa16.94■□□□□ 0.3
CPNE6-204ENST00000557829 PMFBP1Q8TBY8 1022 aa16.94■□□□□ 0.3
CPNE6-204ENST00000557829 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
CPNE6-204ENST00000557829 CABP1Q9NZU7 370 aa16.92■□□□□ 0.3
CPNE6-204ENST00000557829 NSD2O96028 1365 aa16.92■□□□□ 0.3
CPNE6-204ENST00000557829 ANKRD26Q9UPS8 1709 aa16.91■□□□□ 0.3
CPNE6-204ENST00000557829 CANXP27824 592 aaKnown RBP16.91■□□□□ 0.3
CPNE6-204ENST00000557829 SLC4A3P48751 1232 aa16.91■□□□□ 0.3
CPNE6-204ENST00000557829 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
CPNE6-204ENST00000557829 CHD2O14647 1828 aaKnown RBP16.91■□□□□ 0.3
CPNE6-204ENST00000557829 KIF20BQ96Q89 1820 aa16.91■□□□□ 0.3
CPNE6-204ENST00000557829 PRR36Q9H6K5 1346 aa16.91■□□□□ 0.3
CPNE6-204ENST00000557829 A0A1W2PP64 1363 aa16.91■□□□□ 0.3
CPNE6-204ENST00000557829 CD163L1Q9NR16 1453 aa16.9■□□□□ 0.3
CPNE6-204ENST00000557829 ADGRB2O60241 1585 aa16.9■□□□□ 0.3
CPNE6-204ENST00000557829 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
CPNE6-204ENST00000557829 NUDT16Q96DE0 195 aaKnown RBP16.9■□□□□ 0.3
CPNE6-204ENST00000557829 USP19O94966 1318 aa16.9■□□□□ 0.3
CPNE6-204ENST00000557829 CFAP53Q96M91 514 aa16.89■□□□□ 0.3
CPNE6-204ENST00000557829 NUTM2FA1L443 756 aa16.88■□□□□ 0.29
CPNE6-204ENST00000557829 TCP11L2Q8N4U5 519 aa16.88■□□□□ 0.29
CPNE6-204ENST00000557829 COG6Q9Y2V7 657 aa16.88■□□□□ 0.29
CPNE6-204ENST00000557829 ATP7BP35670 1465 aa16.88■□□□□ 0.29
CPNE6-204ENST00000557829 PANK1Q8TE04 598 aa16.88■□□□□ 0.29
CPNE6-204ENST00000557829 CT47B1P0C2W7 299 aaPredicted RBP16.87■□□□□ 0.29
CPNE6-204ENST00000557829 BECN1Q14457 450 aa16.87■□□□□ 0.29
CPNE6-204ENST00000557829 PPIP5K1Q6PFW1 1433 aa16.86■□□□□ 0.29
CPNE6-204ENST00000557829 TERF2IPQ9NYB0 399 aa16.86■□□□□ 0.29
CPNE6-204ENST00000557829 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
CPNE6-204ENST00000557829 ITSN1Q15811 1721 aa16.86■□□□□ 0.29
CPNE6-204ENST00000557829 MYH16Q9H6N6 1097 aa16.85■□□□□ 0.29
CPNE6-204ENST00000557829 IL27Q8NEV9 243 aa16.85■□□□□ 0.29
CPNE6-204ENST00000557829 NWD1Q149M9 1564 aa16.84■□□□□ 0.29
CPNE6-204ENST00000557829 MTHFSP49914 203 aa16.84■□□□□ 0.29
CPNE6-204ENST00000557829 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
CPNE6-204ENST00000557829 FRAT1Q92837 279 aaPredicted RBP16.84■□□□□ 0.29
CPNE6-204ENST00000557829 RWDD1Q9H446 243 aaPredicted RBP16.84■□□□□ 0.29
CPNE6-204ENST00000557829 AKAP12Q02952 1782 aa16.83■□□□□ 0.28
CPNE6-204ENST00000557829 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
CPNE6-204ENST00000557829 TOPAZ1Q8N9V7 1692 aa16.82■□□□□ 0.28
CPNE6-204ENST00000557829 TNNT2P45379 298 aaPredicted RBP16.82■□□□□ 0.28
CPNE6-204ENST00000557829 CERKQ8TCT0 537 aa16.82■□□□□ 0.28
CPNE6-204ENST00000557829 CPSF1Q10570 1443 aaKnown RBP16.82■□□□□ 0.28
CPNE6-204ENST00000557829 FRAT2O75474 233 aaPredicted RBP16.81■□□□□ 0.28
CPNE6-204ENST00000557829 XIRP1Q702N8 1843 aaKnown RBP16.81■□□□□ 0.28
CPNE6-204ENST00000557829 CDC42BPGQ6DT37 1551 aa16.8■□□□□ 0.28
CPNE6-204ENST00000557829 NALCNQ8IZF0 1738 aa16.8■□□□□ 0.28
CPNE6-204ENST00000557829 LRRC7Q96NW7 1537 aa16.8■□□□□ 0.28
CPNE6-204ENST00000557829 PROSER2Q86WR7 435 aaPredicted RBP16.8■□□□□ 0.28
CPNE6-204ENST00000557829 UPF2Q9HAU5 1272 aaKnown RBP16.8■□□□□ 0.28
CPNE6-204ENST00000557829 PCDHB15Q9Y5E8 787 aa16.8■□□□□ 0.28
CPNE6-204ENST00000557829 ADGRL3Q9HAR2 1447 aa16.8■□□□□ 0.28
CPNE6-204ENST00000557829 NEUROD2Q15784 382 aa16.79■□□□□ 0.28
CPNE6-204ENST00000557829 RRP7AQ9Y3A4 280 aaKnown RBP16.79■□□□□ 0.28
CPNE6-204ENST00000557829 PLEKHG3A1L390 1219 aa16.78■□□□□ 0.28
CPNE6-204ENST00000557829 FYB1O15117 783 aa16.78■□□□□ 0.28
CPNE6-204ENST00000557829 SEC24BO95487 1268 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms