RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 UNC5CLQ8IV45 518 aa14.74□□□□□ -0.05
PRKCH-227ENST00000557599 HSPA5P11021 654 aaKnown RBP14.73□□□□□ -0.05
PRKCH-227ENST00000557599 THSD7AQ9UPZ6 1657 aa14.72□□□□□ -0.05
PRKCH-227ENST00000557599 ONECUT3O60422 494 aaPredicted RBP14.72□□□□□ -0.05
PRKCH-227ENST00000557599 PSME1Q06323 249 aa14.71□□□□□ -0.05
PRKCH-227ENST00000557599 WASLO00401 505 aaPredicted RBP14.7□□□□□ -0.06
PRKCH-227ENST00000557599 SLC24A1O60721 1099 aa14.7□□□□□ -0.06
PRKCH-227ENST00000557599 VPS72Q15906 364 aa14.7□□□□□ -0.06
PRKCH-227ENST00000557599 NBPF1Q3BBV0 1214 aa14.7□□□□□ -0.06
PRKCH-227ENST00000557599 SAFB2Q14151 953 aaKnown RBP eCLIP14.69□□□□□ -0.06
PRKCH-227ENST00000557599 TRAK1Q9UPV9 953 aa14.69□□□□□ -0.06
PRKCH-227ENST00000557599 POLR3AO14802 1390 aaPredicted RBP14.69□□□□□ -0.06
PRKCH-227ENST00000557599 CCDC125Q86Z20 511 aa14.68□□□□□ -0.06
PRKCH-227ENST00000557599 CABLES1Q8TDN4 633 aa14.68□□□□□ -0.06
PRKCH-227ENST00000557599 POGKQ9P215 609 aa14.68□□□□□ -0.06
PRKCH-227ENST00000557599 NRKQ7Z2Y5 1582 aa14.68□□□□□ -0.06
PRKCH-227ENST00000557599 BLMP54132 1417 aaPredicted RBP14.67□□□□□ -0.06
PRKCH-227ENST00000557599 PMFBP1Q8TBY8 1022 aa14.67□□□□□ -0.06
PRKCH-227ENST00000557599 LMO7Q8WWI1 1683 aa14.67□□□□□ -0.06
PRKCH-227ENST00000557599 HIRIP3Q9BW71 556 aaPredicted RBP14.66□□□□□ -0.06
PRKCH-227ENST00000557599 MINK1Q8N4C8 1332 aaPredicted RBP14.66□□□□□ -0.06
PRKCH-227ENST00000557599 FAM83GA6ND36 823 aa14.65□□□□□ -0.06
PRKCH-227ENST00000557599 TNS1Q9HBL0 1735 aaKnown RBP14.65□□□□□ -0.06
PRKCH-227ENST00000557599 QRICH2Q9H0J4 1663 aa14.65□□□□□ -0.06
PRKCH-227ENST00000557599 RGPD1P0DJD0 1748 aa14.63□□□□□ -0.07
PRKCH-227ENST00000557599 ST20-MTHFSA0A0A6YYL1 179 aa14.63□□□□□ -0.07
PRKCH-227ENST00000557599 CDCA8Q53HL2 280 aa14.62□□□□□ -0.07
PRKCH-227ENST00000557599 TMF1P82094 1093 aa14.61□□□□□ -0.07
PRKCH-227ENST00000557599 SEPT12Q8IYM1 358 aa14.61□□□□□ -0.07
PRKCH-227ENST00000557599 NUDT16Q96DE0 195 aaKnown RBP14.61□□□□□ -0.07
PRKCH-227ENST00000557599 LRP5O75197 1615 aa14.61□□□□□ -0.07
PRKCH-227ENST00000557599 CENPJQ9HC77 1338 aaPredicted RBP14.61□□□□□ -0.07
PRKCH-227ENST00000557599 DISP2A7MBM2 1401 aa14.59□□□□□ -0.07
PRKCH-227ENST00000557599 PLEKHG3A1L390 1219 aa14.59□□□□□ -0.07
PRKCH-227ENST00000557599 SPATA31A5Q5VU36 1347 aa14.59□□□□□ -0.07
PRKCH-227ENST00000557599 SPATA31A7Q8IWB4 1347 aa14.59□□□□□ -0.07
PRKCH-227ENST00000557599 DIEXFQ68CQ4 756 aaKnown RBP14.58□□□□□ -0.08
PRKCH-227ENST00000557599 POLR3GLQ9BT43 218 aa14.58□□□□□ -0.08
PRKCH-227ENST00000557599 BTG4Q9NY30 223 aa14.58□□□□□ -0.08
PRKCH-227ENST00000557599 USP19O94966 1318 aa14.58□□□□□ -0.08
PRKCH-227ENST00000557599 SLIT3O75094 1523 aa14.57□□□□□ -0.08
PRKCH-227ENST00000557599 HAP1P54257 671 aaPredicted RBP14.57□□□□□ -0.08
PRKCH-227ENST00000557599 CDK19Q9BWU1 502 aa14.57□□□□□ -0.08
PRKCH-227ENST00000557599 PIK3C2AO00443 1686 aa14.57□□□□□ -0.08
PRKCH-227ENST00000557599 PARP4Q9UKK3 1724 aaKnown RBP14.57□□□□□ -0.08
PRKCH-227ENST00000557599 CPDO75976 1380 aa14.57□□□□□ -0.08
PRKCH-227ENST00000557599 KIAA0232Q92628 1395 aa14.57□□□□□ -0.08
PRKCH-227ENST00000557599 CCDC7Q96M83 1385 aa14.57□□□□□ -0.08
PRKCH-227ENST00000557599 SSH2Q76I76 1423 aa14.57□□□□□ -0.08
PRKCH-227ENST00000557599 CAMTA1Q9Y6Y1 1673 aa14.56□□□□□ -0.08
PRKCH-227ENST00000557599 AKAP12Q02952 1782 aa14.56□□□□□ -0.08
PRKCH-227ENST00000557599 LMOD2Q6P5Q4 547 aa14.56□□□□□ -0.08
PRKCH-227ENST00000557599 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
PRKCH-227ENST00000557599 CCDC61Q9Y6R9 512 aa14.56□□□□□ -0.08
PRKCH-227ENST00000557599 ACEP12821 1306 aa14.56□□□□□ -0.08
PRKCH-227ENST00000557599 BRD4O60885 1362 aaPredicted RBP14.56□□□□□ -0.08
PRKCH-227ENST00000557599 RREB1Q92766 1687 aa14.55□□□□□ -0.08
PRKCH-227ENST00000557599 KRT27Q7Z3Y8 459 aa14.55□□□□□ -0.08
PRKCH-227ENST00000557599 SBNO2Q9Y2G9 1366 aa14.55□□□□□ -0.08
PRKCH-227ENST00000557599 USP54Q70EL1 1684 aa14.55□□□□□ -0.08
PRKCH-227ENST00000557599 COL18A1P39060 1754 aa14.55□□□□□ -0.08
PRKCH-227ENST00000557599 WNK3Q9BYP7 1800 aa14.55□□□□□ -0.08
PRKCH-227ENST00000557599 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
PRKCH-227ENST00000557599 SPATA31A1Q5TZJ5 1347 aa14.54□□□□□ -0.08
PRKCH-227ENST00000557599 PPIP5K1Q6PFW1 1433 aa14.54□□□□□ -0.08
PRKCH-227ENST00000557599 PEAK1Q9H792 1746 aa14.53□□□□□ -0.08
PRKCH-227ENST00000557599 KIF7Q2M1P5 1343 aa14.53□□□□□ -0.08
PRKCH-227ENST00000557599 DDX10Q13206 875 aaKnown RBP14.53□□□□□ -0.08
PRKCH-227ENST00000557599 FAM98CQ17RN3 349 aaKnown RBP14.53□□□□□ -0.08
PRKCH-227ENST00000557599 USP6P35125 1406 aa14.52□□□□□ -0.08
PRKCH-227ENST00000557599 WASHC2AQ641Q2 1341 aa14.52□□□□□ -0.08
PRKCH-227ENST00000557599 EVC2Q86UK5 1308 aa14.52□□□□□ -0.08
PRKCH-227ENST00000557599 DEFB132Q7Z7B7 95 aa14.52□□□□□ -0.09
PRKCH-227ENST00000557599 TESK2Q96S53 571 aa14.52□□□□□ -0.09
PRKCH-227ENST00000557599 COL5A2P05997 1499 aaPredicted RBP14.51□□□□□ -0.09
PRKCH-227ENST00000557599 PRDM11Q9NQV5 511 aa14.51□□□□□ -0.09
PRKCH-227ENST00000557599 MON2Q7Z3U7 1717 aa14.51□□□□□ -0.09
PRKCH-227ENST00000557599 RGPD3A6NKT7 1758 aaPredicted RBP14.5□□□□□ -0.09
PRKCH-227ENST00000557599 RGPD4Q7Z3J3 1758 aa14.5□□□□□ -0.09
PRKCH-227ENST00000557599 LRRC37A3O60309 1634 aa14.49□□□□□ -0.09
PRKCH-227ENST00000557599 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
PRKCH-227ENST00000557599 CCDC9Q9Y3X0 531 aaKnown RBP14.49□□□□□ -0.09
PRKCH-227ENST00000557599 NUP188Q5SRE5 1749 aa14.49□□□□□ -0.09
PRKCH-227ENST00000557599 PLEKHG5O94827 1062 aa14.48□□□□□ -0.09
PRKCH-227ENST00000557599 BARGINQ6ZT62 677 aa14.48□□□□□ -0.09
PRKCH-227ENST00000557599 ABCC6O95255 1503 aa14.47□□□□□ -0.09
PRKCH-227ENST00000557599 PUS7Q96PZ0 661 aaKnown RBP14.47□□□□□ -0.09
PRKCH-227ENST00000557599 CPSF1Q10570 1443 aaKnown RBP14.47□□□□□ -0.09
PRKCH-227ENST00000557599 NFAT5O94916 1531 aa14.46□□□□□ -0.09
PRKCH-227ENST00000557599 SBF2Q86WG5 1849 aa14.46□□□□□ -0.09
PRKCH-227ENST00000557599 C11orf95C9JLR9 678 aaPredicted RBP14.46□□□□□ -0.09
PRKCH-227ENST00000557599 CHRNA2Q15822 529 aa14.46□□□□□ -0.09
PRKCH-227ENST00000557599 SRPK2P78362 688 aaKnown RBP14.45□□□□□ -0.1
PRKCH-227ENST00000557599 CABP2Q9NPB3 220 aa14.45□□□□□ -0.1
PRKCH-227ENST00000557599 AATKQ6ZMQ8 1374 aa14.45□□□□□ -0.1
PRKCH-227ENST00000557599 GCP02774 474 aa14.44□□□□□ -0.1
PRKCH-227ENST00000557599 BAG6P46379 1132 aa14.44□□□□□ -0.1
PRKCH-227ENST00000557599 ZC3H6P61129 1189 aaKnown RBP14.44□□□□□ -0.1
PRKCH-227ENST00000557599 ABTB2Q8N961 1025 aa14.44□□□□□ -0.1
PRKCH-227ENST00000557599 PARD3Q8TEW0 1356 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms