RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 NRXN3Q9Y4C0 1643 aa10.62□□□□□ -0.71
SPTLC2-206ENST00000557566 RALGAPBQ86X10 1494 aa10.62□□□□□ -0.71
SPTLC2-206ENST00000557566 C7P10643 843 aa10.62□□□□□ -0.71
SPTLC2-206ENST00000557566 BAG6P46379 1132 aa10.62□□□□□ -0.71
SPTLC2-206ENST00000557566 ATMINO43313 823 aaPredicted RBP10.61□□□□□ -0.71
SPTLC2-206ENST00000557566 CHRM1P11229 460 aaPredicted RBP10.6□□□□□ -0.71
SPTLC2-206ENST00000557566 IFFO2Q5TF58 517 aa10.6□□□□□ -0.71
SPTLC2-206ENST00000557566 MAMSTRQ6ZN01 415 aa10.6□□□□□ -0.71
SPTLC2-206ENST00000557566 UNC5CLQ8IV45 518 aa10.6□□□□□ -0.71
SPTLC2-206ENST00000557566 PCDHB13Q9Y5F0 798 aa10.6□□□□□ -0.71
SPTLC2-206ENST00000557566 IQGAP3Q86VI3 1631 aa10.59□□□□□ -0.71
SPTLC2-206ENST00000557566 BBXQ8WY36 941 aaPredicted RBP10.59□□□□□ -0.71
SPTLC2-206ENST00000557566 ORAI2Q96SN7 254 aa10.59□□□□□ -0.71
SPTLC2-206ENST00000557566 METP08581 1390 aa10.58□□□□□ -0.72
SPTLC2-206ENST00000557566 MAP3K13O43283 966 aa10.58□□□□□ -0.72
SPTLC2-206ENST00000557566 SEPT12Q8IYM1 358 aa10.58□□□□□ -0.72
SPTLC2-206ENST00000557566 CHIC2Q9UKJ5 165 aa10.58□□□□□ -0.72
SPTLC2-206ENST00000557566 SLIT2O94813 1529 aa10.58□□□□□ -0.72
SPTLC2-206ENST00000557566 E9PCH4 1651 aa10.57□□□□□ -0.72
SPTLC2-206ENST00000557566 R3HDM1Q15032 1099 aaKnown RBP10.57□□□□□ -0.72
SPTLC2-206ENST00000557566 KRT27Q7Z3Y8 459 aa10.57□□□□□ -0.72
SPTLC2-206ENST00000557566 KIF12Q96FN5 646 aa10.57□□□□□ -0.72
SPTLC2-206ENST00000557566 FAM163AQ96GL9 167 aaPredicted RBP10.57□□□□□ -0.72
SPTLC2-206ENST00000557566 RGPD1P0DJD0 1748 aa10.57□□□□□ -0.72
SPTLC2-206ENST00000557566 NPHP3Q7Z494 1330 aa10.57□□□□□ -0.72
SPTLC2-206ENST00000557566 LCE2DQ5TA82 110 aaPredicted RBP10.56□□□□□ -0.72
SPTLC2-206ENST00000557566 PXDNQ92626 1479 aa10.55□□□□□ -0.72
SPTLC2-206ENST00000557566 KANK4Q5T7N3 995 aaPredicted RBP10.55□□□□□ -0.72
SPTLC2-206ENST00000557566 RNF25Q96BH1 459 aaPredicted RBP10.55□□□□□ -0.72
SPTLC2-206ENST00000557566 ANKRD50Q9ULJ7 1429 aa10.55□□□□□ -0.72
SPTLC2-206ENST00000557566 ADGRL2O95490 1459 aa10.55□□□□□ -0.72
SPTLC2-206ENST00000557566 SCUBE2Q9NQ36 999 aa10.54□□□□□ -0.72
SPTLC2-206ENST00000557566 USP32Q8NFA0 1604 aa10.54□□□□□ -0.72
SPTLC2-206ENST00000557566 NWD2Q9ULI1 1742 aa10.53□□□□□ -0.72
SPTLC2-206ENST00000557566 ONECUT3O60422 494 aaPredicted RBP10.53□□□□□ -0.72
SPTLC2-206ENST00000557566 EN1Q05925 392 aaPredicted RBP10.53□□□□□ -0.72
SPTLC2-206ENST00000557566 ZNF467Q7Z7K2 595 aaPredicted RBP10.53□□□□□ -0.72
SPTLC2-206ENST00000557566 PCDHB8Q9UN66 801 aa10.53□□□□□ -0.72
SPTLC2-206ENST00000557566 VPS8Q8N3P4 1428 aa10.52□□□□□ -0.73
SPTLC2-206ENST00000557566 SENP3-EIF4A1A0A087X0R7 540 aa10.52□□□□□ -0.73
SPTLC2-206ENST00000557566 A0A0G2JS52 829 aa10.52□□□□□ -0.73
SPTLC2-206ENST00000557566 MYT1Q01538 1121 aa10.52□□□□□ -0.73
SPTLC2-206ENST00000557566 VPS72Q15906 364 aa10.52□□□□□ -0.73
SPTLC2-206ENST00000557566 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
SPTLC2-206ENST00000557566 TAOK2Q9UL54 1235 aa10.52□□□□□ -0.73
SPTLC2-206ENST00000557566 CCDC9Q9Y3X0 531 aaKnown RBP10.52□□□□□ -0.73
SPTLC2-206ENST00000557566 PLCH1Q4KWH8 1693 aa10.52□□□□□ -0.73
SPTLC2-206ENST00000557566 LRPPRCP42704 1394 aaKnown RBP10.52□□□□□ -0.73
SPTLC2-206ENST00000557566 RIOK3O14730 519 aaKnown RBP10.51□□□□□ -0.73
SPTLC2-206ENST00000557566 ZNF326Q5BKZ1 582 aaKnown RBP10.51□□□□□ -0.73
SPTLC2-206ENST00000557566 ESCO1Q5FWF5 840 aa10.51□□□□□ -0.73
SPTLC2-206ENST00000557566 DISP2A7MBM2 1401 aa10.5□□□□□ -0.73
SPTLC2-206ENST00000557566 TNS1Q9HBL0 1735 aaKnown RBP10.5□□□□□ -0.73
SPTLC2-206ENST00000557566 ATN1P54259 1190 aaPredicted RBP10.5□□□□□ -0.73
SPTLC2-206ENST00000557566 XPCQ01831 940 aaPredicted RBP10.5□□□□□ -0.73
SPTLC2-206ENST00000557566 IFNL1Q8IU54 200 aa10.5□□□□□ -0.73
SPTLC2-206ENST00000557566 HS6ST3Q8IZP7 471 aa10.5□□□□□ -0.73
SPTLC2-206ENST00000557566 ADGRB2O60241 1585 aa10.49□□□□□ -0.73
SPTLC2-206ENST00000557566 CDC42BPGQ6DT37 1551 aa10.49□□□□□ -0.73
SPTLC2-206ENST00000557566 FOXO3O43524 673 aa10.49□□□□□ -0.73
SPTLC2-206ENST00000557566 ROBO2Q9HCK4 1378 aa10.49□□□□□ -0.73
SPTLC2-206ENST00000557566 HFM1A2PYH4 1435 aa10.49□□□□□ -0.73
SPTLC2-206ENST00000557566 UTRNP46939 3433 aa10.48□□□□□ -0.73
SPTLC2-206ENST00000557566 HAP1P54257 671 aaPredicted RBP10.48□□□□□ -0.73
SPTLC2-206ENST00000557566 SGIP1Q9BQI5 828 aa10.48□□□□□ -0.73
SPTLC2-206ENST00000557566 PPP1R1BQ9UD71 204 aaPredicted RBP10.48□□□□□ -0.73
SPTLC2-206ENST00000557566 NINLQ9Y2I6 1382 aa10.48□□□□□ -0.73
SPTLC2-206ENST00000557566 PRAG1Q86YV5 1406 aa10.47□□□□□ -0.73
SPTLC2-206ENST00000557566 NEXMIFQ5QGS0 1516 aa10.47□□□□□ -0.73
SPTLC2-206ENST00000557566 CEP350Q5VT06 3117 aa10.47□□□□□ -0.73
SPTLC2-206ENST00000557566 EZH2Q15910 746 aaKnown RBP10.46□□□□□ -0.73
SPTLC2-206ENST00000557566 ZNF784Q8NCA9 323 aaPredicted RBP10.46□□□□□ -0.73
SPTLC2-206ENST00000557566 SPATA31A3Q5VYP0 1347 aa10.46□□□□□ -0.73
SPTLC2-206ENST00000557566 KIF1AQ12756 1690 aa10.45□□□□□ -0.74
SPTLC2-206ENST00000557566 CAMTA1Q9Y6Y1 1673 aa10.45□□□□□ -0.74
SPTLC2-206ENST00000557566 CCDC144AA2RUR9 1427 aa10.45□□□□□ -0.74
SPTLC2-206ENST00000557566 PARD3Q8TEW0 1356 aa10.45□□□□□ -0.74
SPTLC2-206ENST00000557566 VGFO15240 615 aaPredicted RBP10.45□□□□□ -0.74
SPTLC2-206ENST00000557566 FAM98CQ17RN3 349 aaKnown RBP10.45□□□□□ -0.74
SPTLC2-206ENST00000557566 ABCA3Q99758 1704 aa10.44□□□□□ -0.74
SPTLC2-206ENST00000557566 RREB1Q92766 1687 aa10.44□□□□□ -0.74
SPTLC2-206ENST00000557566 SPON1Q9HCB6 807 aa10.44□□□□□ -0.74
SPTLC2-206ENST00000557566 NRAPQ86VF7 1730 aa10.44□□□□□ -0.74
SPTLC2-206ENST00000557566 KIF1BO60333 1816 aa10.43□□□□□ -0.74
SPTLC2-206ENST00000557566 C1QTNF8P60827 252 aa10.43□□□□□ -0.74
SPTLC2-206ENST00000557566 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
SPTLC2-206ENST00000557566 CAMKK2Q96RR4 588 aa10.43□□□□□ -0.74
SPTLC2-206ENST00000557566 NUP188Q5SRE5 1749 aa10.43□□□□□ -0.74
SPTLC2-206ENST00000557566 CHD4Q14839 1912 aa10.43□□□□□ -0.74
SPTLC2-206ENST00000557566 TNS3Q68CZ2 1445 aa10.42□□□□□ -0.74
SPTLC2-206ENST00000557566 PSEN1P49768 467 aa10.42□□□□□ -0.74
SPTLC2-206ENST00000557566 NBPF8Q3BBV2 869 aa10.42□□□□□ -0.74
SPTLC2-206ENST00000557566 FAM182BQ5T319 152 aa10.42□□□□□ -0.74
SPTLC2-206ENST00000557566 NBPF14Q5TI25 921 aa10.42□□□□□ -0.74
SPTLC2-206ENST00000557566 TRPC6Q9Y210 931 aa10.42□□□□□ -0.74
SPTLC2-206ENST00000557566 NUP155O75694 1391 aa10.41□□□□□ -0.74
SPTLC2-206ENST00000557566 POTEFA5A3E0 1075 aa10.41□□□□□ -0.74
SPTLC2-206ENST00000557566 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
SPTLC2-206ENST00000557566 NAIPQ13075 1403 aa10.41□□□□□ -0.74
SPTLC2-206ENST00000557566 THSD7AQ9UPZ6 1657 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms