RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 NGDNQ8NEJ9 315 aaKnown RBP19.55■□□□□ 0.72
ARHGEF40-208ENST00000557498 PHF8Q9UPP1 1060 aa19.55■□□□□ 0.72
ARHGEF40-208ENST00000557498 ATF3P18847 181 aa19.54■□□□□ 0.72
ARHGEF40-208ENST00000557498 TTC21BQ7Z4L5 1316 aa19.53■□□□□ 0.72
ARHGEF40-208ENST00000557498 TTC21AQ8NDW8 1320 aa19.52■□□□□ 0.72
ARHGEF40-208ENST00000557498 CADPS2Q86UW7 1296 aa19.52■□□□□ 0.72
ARHGEF40-208ENST00000557498 NME9Q86XW9 330 aa19.52■□□□□ 0.72
ARHGEF40-208ENST00000557498 ESCO1Q5FWF5 840 aa19.51■□□□□ 0.71
ARHGEF40-208ENST00000557498 PNISRQ8TF01 805 aaKnown RBP19.5■□□□□ 0.71
ARHGEF40-208ENST00000557498 OVOS2A0A0J9YW53 1432 aa19.5■□□□□ 0.71
ARHGEF40-208ENST00000557498 OVOS2Q6IE36 1432 aa19.5■□□□□ 0.71
ARHGEF40-208ENST00000557498 PIK3C2AO00443 1686 aa19.49■□□□□ 0.71
ARHGEF40-208ENST00000557498 TNNT2P45379 298 aaPredicted RBP19.49■□□□□ 0.71
ARHGEF40-208ENST00000557498 FAM9BQ8IZU0 186 aa19.49■□□□□ 0.71
ARHGEF40-208ENST00000557498 USP54Q70EL1 1684 aa19.49■□□□□ 0.71
ARHGEF40-208ENST00000557498 SCAF1Q9H7N4 1312 aaKnown RBP19.49■□□□□ 0.71
ARHGEF40-208ENST00000557498 ORAI2Q96SN7 254 aa19.48■□□□□ 0.71
ARHGEF40-208ENST00000557498 LTBP4Q8N2S1 1624 aa19.47■□□□□ 0.71
ARHGEF40-208ENST00000557498 COG3Q96JB2 828 aa19.46■□□□□ 0.71
ARHGEF40-208ENST00000557498 ZRANB1Q9UGI0 708 aa19.46■□□□□ 0.71
ARHGEF40-208ENST00000557498 USP31Q70CQ4 1352 aa19.45■□□□□ 0.7
ARHGEF40-208ENST00000557498 TRPM3Q9HCF6 1732 aaPredicted RBP19.45■□□□□ 0.7
ARHGEF40-208ENST00000557498 MARF1Q9Y4F3 1742 aaKnown RBP19.44■□□□□ 0.7
ARHGEF40-208ENST00000557498 AATKQ6ZMQ8 1374 aa19.44■□□□□ 0.7
ARHGEF40-208ENST00000557498 MTHFSP49914 203 aa19.43■□□□□ 0.7
ARHGEF40-208ENST00000557498 PSME1Q06323 249 aa19.43■□□□□ 0.7
ARHGEF40-208ENST00000557498 SHPRHQ149N8 1683 aa19.43■□□□□ 0.7
ARHGEF40-208ENST00000557498 SMG6Q86US8 1419 aaKnown RBP19.42■□□□□ 0.7
ARHGEF40-208ENST00000557498 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF40-208ENST00000557498 INSRP06213 1382 aa19.42■□□□□ 0.7
ARHGEF40-208ENST00000557498 CFAP53Q96M91 514 aa19.41■□□□□ 0.7
ARHGEF40-208ENST00000557498 MAP2P11137 1827 aaKnown RBP19.41■□□□□ 0.7
ARHGEF40-208ENST00000557498 FOXO3O43524 673 aa19.4■□□□□ 0.7
ARHGEF40-208ENST00000557498 COL3A1P02461 1466 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF40-208ENST00000557498 CENPBP07199 599 aaPredicted RBP19.39■□□□□ 0.69
ARHGEF40-208ENST00000557498 BLMP54132 1417 aaPredicted RBP19.39■□□□□ 0.69
ARHGEF40-208ENST00000557498 PAK3O75914 559 aaPredicted RBP19.38■□□□□ 0.69
ARHGEF40-208ENST00000557498 HNRNPUQ00839 825 aaKnown RBP eCLIP19.38■□□□□ 0.69
ARHGEF40-208ENST00000557498 WDR43Q15061 677 aaKnown RBP eCLIP19.38■□□□□ 0.69
ARHGEF40-208ENST00000557498 CDK12Q9NYV4 1490 aaPredicted RBP19.38■□□□□ 0.69
ARHGEF40-208ENST00000557498 ALS2Q96Q42 1657 aa19.37■□□□□ 0.69
ARHGEF40-208ENST00000557498 KRT28Q7Z3Y7 464 aa19.37■□□□□ 0.69
ARHGEF40-208ENST00000557498 POLKQ9UBT6 870 aa19.37■□□□□ 0.69
ARHGEF40-208ENST00000557498 PNPLA6Q8IY17 1366 aa19.36■□□□□ 0.69
ARHGEF40-208ENST00000557498 NPHP3Q7Z494 1330 aa19.36■□□□□ 0.69
ARHGEF40-208ENST00000557498 NLRP6P59044 892 aa19.36■□□□□ 0.69
ARHGEF40-208ENST00000557498 ABTB2Q8N961 1025 aa19.36■□□□□ 0.69
ARHGEF40-208ENST00000557498 SLAIN2Q9P270 581 aa19.36■□□□□ 0.69
ARHGEF40-208ENST00000557498 PXDNQ92626 1479 aa19.35■□□□□ 0.69
ARHGEF40-208ENST00000557498 XPCQ01831 940 aaPredicted RBP19.35■□□□□ 0.69
ARHGEF40-208ENST00000557498 BRINP3Q76B58 766 aa19.35■□□□□ 0.69
ARHGEF40-208ENST00000557498 SBNO1A3KN83 1393 aa19.34■□□□□ 0.69
ARHGEF40-208ENST00000557498 FBLN1P23142 703 aa19.34■□□□□ 0.69
ARHGEF40-208ENST00000557498 EMILIN1Q9Y6C2 1016 aa19.33■□□□□ 0.68
ARHGEF40-208ENST00000557498 SLIT3O75094 1523 aa19.33■□□□□ 0.68
ARHGEF40-208ENST00000557498 PEAK1Q9H792 1746 aa19.33■□□□□ 0.68
ARHGEF40-208ENST00000557498 NHSL1Q5SYE7 1610 aa19.33■□□□□ 0.68
ARHGEF40-208ENST00000557498 RRS1Q15050 365 aaKnown RBP19.32■□□□□ 0.68
ARHGEF40-208ENST00000557498 NUTM2GQ5VZR2 741 aa19.32■□□□□ 0.68
ARHGEF40-208ENST00000557498 ADAMTS8Q9UP79 889 aa19.32■□□□□ 0.68
ARHGEF40-208ENST00000557498 TNS3Q68CZ2 1445 aa19.31■□□□□ 0.68
ARHGEF40-208ENST00000557498 NFAT5O94916 1531 aa19.3■□□□□ 0.68
ARHGEF40-208ENST00000557498 DDX17Q92841 729 aaKnown RBP19.3■□□□□ 0.68
ARHGEF40-208ENST00000557498 ZBED9Q6R2W3 1325 aa19.29■□□□□ 0.68
ARHGEF40-208ENST00000557498 PPM1GO15355 546 aaPredicted RBP19.29■□□□□ 0.68
ARHGEF40-208ENST00000557498 USP19O94966 1318 aa19.28■□□□□ 0.68
ARHGEF40-208ENST00000557498 SOX12O15370 315 aa19.28■□□□□ 0.68
ARHGEF40-208ENST00000557498 DIAPH1O60610 1272 aaKnown RBP19.28■□□□□ 0.68
ARHGEF40-208ENST00000557498 NUDCQ9Y266 331 aa19.28■□□□□ 0.68
ARHGEF40-208ENST00000557498 MAP3K19Q56UN5 1328 aa19.27■□□□□ 0.68
ARHGEF40-208ENST00000557498 LTN1O94822 1766 aa19.27■□□□□ 0.68
ARHGEF40-208ENST00000557498 MED1Q15648 1581 aaPredicted RBP19.27■□□□□ 0.67
ARHGEF40-208ENST00000557498 ROBO1Q9Y6N7 1651 aa19.27■□□□□ 0.67
ARHGEF40-208ENST00000557498 PHRF1Q9P1Y6 1649 aaKnown RBP19.26■□□□□ 0.67
ARHGEF40-208ENST00000557498 KCNH5Q8NCM2 988 aa19.26■□□□□ 0.67
ARHGEF40-208ENST00000557498 KIF24Q5T7B8 1368 aa19.26■□□□□ 0.67
ARHGEF40-208ENST00000557498 SOS2Q07890 1332 aaPredicted RBP19.25■□□□□ 0.67
ARHGEF40-208ENST00000557498 SPATA31A3Q5VYP0 1347 aa19.25■□□□□ 0.67
ARHGEF40-208ENST00000557498 CRYBG1Q9Y4K1 1723 aa19.25■□□□□ 0.67
ARHGEF40-208ENST00000557498 ARHGEF10O15013 1369 aa19.25■□□□□ 0.67
ARHGEF40-208ENST00000557498 FLT4P35916 1363 aa19.25■□□□□ 0.67
ARHGEF40-208ENST00000557498 LMOD2Q6P5Q4 547 aa19.25■□□□□ 0.67
ARHGEF40-208ENST00000557498 RTL1A6NKG5 1358 aa19.24■□□□□ 0.67
ARHGEF40-208ENST00000557498 IQSEC2Q5JU85 1478 aa19.23■□□□□ 0.67
ARHGEF40-208ENST00000557498 AHDC1Q5TGY3 1603 aaPredicted RBP19.23■□□□□ 0.67
ARHGEF40-208ENST00000557498 U2SURPO15042 1029 aaKnown RBP19.23■□□□□ 0.67
ARHGEF40-208ENST00000557498 U2AF1L5P0DN76 240 aaPredicted RBP19.23■□□□□ 0.67
ARHGEF40-208ENST00000557498 IL13P35225 146 aa19.23■□□□□ 0.67
ARHGEF40-208ENST00000557498 U2AF1Q01081 240 aaKnown RBP eCLIP19.23■□□□□ 0.67
ARHGEF40-208ENST00000557498 AMPHP49418 695 aa19.22■□□□□ 0.67
ARHGEF40-208ENST00000557498 CCDC146Q8IYE0 955 aa19.22■□□□□ 0.67
ARHGEF40-208ENST00000557498 RGPD1P0DJD0 1748 aa19.22■□□□□ 0.67
ARHGEF40-208ENST00000557498 GCP02774 474 aa19.2■□□□□ 0.66
ARHGEF40-208ENST00000557498 RUNDC1Q96C34 613 aa19.2■□□□□ 0.66
ARHGEF40-208ENST00000557498 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
ARHGEF40-208ENST00000557498 EIF4A2Q14240 407 aaKnown RBP19.19■□□□□ 0.66
ARHGEF40-208ENST00000557498 HSP90AB2PQ58FF8 381 aa19.19■□□□□ 0.66
ARHGEF40-208ENST00000557498 ABCA3Q99758 1704 aa19.18■□□□□ 0.66
ARHGEF40-208ENST00000557498 HOXC9P31274 260 aa19.18■□□□□ 0.66
ARHGEF40-208ENST00000557498 TOM1O60784 492 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms