RNA–Protein interactions for RNA: ENST00000557473.1

PRKCH-224, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-224ENST00000557473 PREX2Q70Z35 1606 aa9.6□□□□□ -0.87
PRKCH-224ENST00000557473 RCCD1A6NED2 376 aa9.6□□□□□ -0.87
PRKCH-224ENST00000557473 MLH3Q9UHC1 1453 aa9.59□□□□□ -0.87
PRKCH-224ENST00000557473 DIP2CQ9Y2E4 1556 aa9.59□□□□□ -0.87
PRKCH-224ENST00000557473 NKX2-3Q8TAU0 364 aa9.59□□□□□ -0.87
PRKCH-224ENST00000557473 ABCC1P33527 1531 aa9.59□□□□□ -0.87
PRKCH-224ENST00000557473 CDC42BPBQ9Y5S2 1711 aa9.59□□□□□ -0.87
PRKCH-224ENST00000557473 TMEM134Q9H6X4 195 aa9.58□□□□□ -0.88
PRKCH-224ENST00000557473 ATP1B4Q9UN42 357 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-224ENST00000557473 FYCO1Q9BQS8 1478 aa9.58□□□□□ -0.88
PRKCH-224ENST00000557473 PREX1Q8TCU6 1659 aa9.58□□□□□ -0.88
PRKCH-224ENST00000557473 AGLP35573 1532 aa9.57□□□□□ -0.88
PRKCH-224ENST00000557473 ABCA6Q8N139 1617 aa9.57□□□□□ -0.88
PRKCH-224ENST00000557473 NECTIN2Q92692 538 aa9.57□□□□□ -0.88
PRKCH-224ENST00000557473 ITSN2Q9NZM3 1697 aa9.56□□□□□ -0.88
PRKCH-224ENST00000557473 FECHP22830 423 aa9.56□□□□□ -0.88
PRKCH-224ENST00000557473 HSPA2P54652 639 aa9.56□□□□□ -0.88
PRKCH-224ENST00000557473 MLECQ14165 292 aa9.56□□□□□ -0.88
PRKCH-224ENST00000557473 SMYD5Q6GMV2 418 aa9.56□□□□□ -0.88
PRKCH-224ENST00000557473 AFAP1Q8N556 730 aa9.56□□□□□ -0.88
PRKCH-224ENST00000557473 PCDHB3Q9Y5E6 796 aa9.56□□□□□ -0.88
PRKCH-224ENST00000557473 CFHP08603 1231 aa9.55□□□□□ -0.88
PRKCH-224ENST00000557473 PPP1R18Q6NYC8 613 aa9.55□□□□□ -0.88
PRKCH-224ENST00000557473 NLRP7Q8WX94 980 aa9.55□□□□□ -0.88
PRKCH-224ENST00000557473 ARXQ96QS3 562 aa9.55□□□□□ -0.88
PRKCH-224ENST00000557473 TRAPPC8Q9Y2L5 1435 aa9.55□□□□□ -0.88
PRKCH-224ENST00000557473 CDC42BPAQ5VT25 1732 aa9.54□□□□□ -0.88
PRKCH-224ENST00000557473 TLL1O43897 1013 aa9.54□□□□□ -0.88
PRKCH-224ENST00000557473 HIC1Q14526 733 aa9.54□□□□□ -0.88
PRKCH-224ENST00000557473 BLOC1S3Q6QNY0 202 aa9.54□□□□□ -0.88
PRKCH-224ENST00000557473 KIDINS220Q9ULH0 1771 aa9.53□□□□□ -0.88
PRKCH-224ENST00000557473 UHRF1BP1Q6BDS2 1440 aa9.53□□□□□ -0.88
PRKCH-224ENST00000557473 GPR37O15354 613 aa9.52□□□□□ -0.89
PRKCH-224ENST00000557473 PXYLP1Q8TE99 480 aa9.52□□□□□ -0.89
PRKCH-224ENST00000557473 PRKD2Q9BZL6 878 aa9.52□□□□□ -0.89
PRKCH-224ENST00000557473 SAMD9LQ8IVG5 1584 aa9.51□□□□□ -0.89
PRKCH-224ENST00000557473 CNTLNQ9NXG0 1405 aa9.51□□□□□ -0.89
PRKCH-224ENST00000557473 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.51□□□□□ -0.89
PRKCH-224ENST00000557473 GNPATO15228 680 aa9.51□□□□□ -0.89
PRKCH-224ENST00000557473 METTL3Q86U44 580 aaKnown RBP9.51□□□□□ -0.89
PRKCH-224ENST00000557473 GPIHBP1Q8IV16 184 aa9.51□□□□□ -0.89
PRKCH-224ENST00000557473 PRR14Q9BWN1 585 aa9.51□□□□□ -0.89
PRKCH-224ENST00000557473 C3P01024 1663 aa9.51□□□□□ -0.89
PRKCH-224ENST00000557473 SYCP2Q9BX26 1530 aa9.51□□□□□ -0.89
PRKCH-224ENST00000557473 GPATCH8Q9UKJ3 1502 aaKnown RBP9.51□□□□□ -0.89
PRKCH-224ENST00000557473 SETD1BQ9UPS6 1966 aaKnown RBP9.5□□□□□ -0.89
PRKCH-224ENST00000557473 KIAA1107Q9UPP5 1409 aa9.5□□□□□ -0.89
PRKCH-224ENST00000557473 ZPR1O75312 459 aa9.5□□□□□ -0.89
PRKCH-224ENST00000557473 OATP04181 439 aa9.5□□□□□ -0.89
PRKCH-224ENST00000557473 SLC10A3P09131 477 aa9.5□□□□□ -0.89
PRKCH-224ENST00000557473 CEBPAP49715 358 aaPredicted RBP9.5□□□□□ -0.89
PRKCH-224ENST00000557473 KMT5BQ4FZB7 885 aa9.5□□□□□ -0.89
PRKCH-224ENST00000557473 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.5□□□□□ -0.89
PRKCH-224ENST00000557473 PLEKHH2Q8IVE3 1493 aa9.5□□□□□ -0.89
PRKCH-224ENST00000557473 STRCQ7RTU9 1775 aa9.49□□□□□ -0.89
PRKCH-224ENST00000557473 PLXNC1O60486 1568 aa9.49□□□□□ -0.89
PRKCH-224ENST00000557473 INO80Q9ULG1 1556 aaPredicted RBP9.49□□□□□ -0.89
PRKCH-224ENST00000557473 MROH2AA6NES4 1674 aa9.48□□□□□ -0.89
PRKCH-224ENST00000557473 ATP7AQ04656 1500 aa9.48□□□□□ -0.89
PRKCH-224ENST00000557473 Q6ZNB5 142 aa9.48□□□□□ -0.89
PRKCH-224ENST00000557473 PTPRTO14522 1441 aa9.48□□□□□ -0.89
PRKCH-224ENST00000557473 NPATQ14207 1427 aa9.48□□□□□ -0.89
PRKCH-224ENST00000557473 RDH13Q8NBN7 331 aa9.46□□□□□ -0.9
PRKCH-224ENST00000557473 ESF1Q9H501 851 aaKnown RBP9.46□□□□□ -0.9
PRKCH-224ENST00000557473 EHBP1L1Q8N3D4 1523 aa9.46□□□□□ -0.9
PRKCH-224ENST00000557473 ACTN4O43707 911 aaKnown RBP9.45□□□□□ -0.9
PRKCH-224ENST00000557473 GGCXP38435 758 aa9.45□□□□□ -0.9
PRKCH-224ENST00000557473 PUS10Q3MIT2 529 aaKnown RBP9.45□□□□□ -0.9
PRKCH-224ENST00000557473 SPAG9O60271 1321 aaKnown RBP9.45□□□□□ -0.9
PRKCH-224ENST00000557473 MTUS2Q5JR59 1369 aa9.45□□□□□ -0.9
PRKCH-224ENST00000557473 CCNB3Q8WWL7 1395 aa9.45□□□□□ -0.9
PRKCH-224ENST00000557473 NCOA1Q15788 1441 aa9.45□□□□□ -0.9
PRKCH-224ENST00000557473 TIAM1Q13009 1591 aa9.45□□□□□ -0.9
PRKCH-224ENST00000557473 DDX11L8A8MPP1 907 aa9.44□□□□□ -0.9
PRKCH-224ENST00000557473 CFDP1Q9UEE9 299 aaPredicted RBP9.44□□□□□ -0.9
PRKCH-224ENST00000557473 CEP162Q5TB80 1403 aa9.44□□□□□ -0.9
PRKCH-224ENST00000557473 A2MP01023 1474 aa9.44□□□□□ -0.9
PRKCH-224ENST00000557473 IQSEC2Q5JU85 1478 aa9.43□□□□□ -0.9
PRKCH-224ENST00000557473 MBD5Q9P267 1494 aa9.43□□□□□ -0.9
PRKCH-224ENST00000557473 S1PR4O95977 384 aa9.43□□□□□ -0.9
PRKCH-224ENST00000557473 VSIG10Q8N0Z9 540 aa9.43□□□□□ -0.9
PRKCH-224ENST00000557473 PHOX2BQ99453 314 aa9.43□□□□□ -0.9
PRKCH-224ENST00000557473 ZNF777Q9ULD5 760 aaPredicted RBP9.43□□□□□ -0.9
PRKCH-224ENST00000557473 ZNF142P52746 1687 aaPredicted RBP9.42□□□□□ -0.9
PRKCH-224ENST00000557473 ADGBQ8N7X0 1667 aa9.42□□□□□ -0.9
PRKCH-224ENST00000557473 LTBP4Q8N2S1 1624 aa9.42□□□□□ -0.9
PRKCH-224ENST00000557473 RTEL1-TNFRSF6BF6WH68 1400 aa9.42□□□□□ -0.9
PRKCH-224ENST00000557473 ZMYM3Q14202 1370 aa9.42□□□□□ -0.9
PRKCH-224ENST00000557473 PPEF1O14829 653 aaPredicted RBP9.42□□□□□ -0.9
PRKCH-224ENST00000557473 GFRA3O60609 400 aa9.42□□□□□ -0.9
PRKCH-224ENST00000557473 HNRNPMP52272 730 aaKnown RBP eCLIP9.42□□□□□ -0.9
PRKCH-224ENST00000557473 SUPT6HQ7KZ85 1726 aaKnown RBP9.42□□□□□ -0.9
PRKCH-224ENST00000557473 FAM135AQ9P2D6 1515 aa9.41□□□□□ -0.9
PRKCH-224ENST00000557473 PLA2R1Q13018 1463 aa9.41□□□□□ -0.9
PRKCH-224ENST00000557473 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
PRKCH-224ENST00000557473 CAMSAP1Q5T5Y3 1602 aa9.41□□□□□ -0.9
PRKCH-224ENST00000557473 MYO3AQ8NEV4 1616 aa9.41□□□□□ -0.9
PRKCH-224ENST00000557473 PTPRKQ15262 1439 aa9.4□□□□□ -0.9
PRKCH-224ENST00000557473 CLTCQ00610 1675 aaKnown RBP9.4□□□□□ -0.9
PRKCH-224ENST00000557473 NR1I2O75469 434 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms