RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 COL14A1Q05707 1796 aaKnown RBP14.67□□□□□ -0.06
NEDD1-211ENST00000557454 ATF5Q9Y2D1 282 aaPredicted RBP14.66□□□□□ -0.06
NEDD1-211ENST00000557454 FMN2Q9NZ56 1722 aa14.66□□□□□ -0.06
NEDD1-211ENST00000557454 CLTCL1P53675 1640 aa14.66□□□□□ -0.06
NEDD1-211ENST00000557454 SPATA31A1Q5TZJ5 1347 aa14.66□□□□□ -0.06
NEDD1-211ENST00000557454 PLEKHH1Q9ULM0 1364 aa14.65□□□□□ -0.06
NEDD1-211ENST00000557454 FAM50AQ14320 339 aaKnown RBP14.65□□□□□ -0.06
NEDD1-211ENST00000557454 PHF8Q9UPP1 1060 aa14.65□□□□□ -0.06
NEDD1-211ENST00000557454 VGFO15240 615 aaPredicted RBP14.64□□□□□ -0.07
NEDD1-211ENST00000557454 DLC1Q96QB1 1528 aa14.63□□□□□ -0.07
NEDD1-211ENST00000557454 NRXN1Q9ULB1 1477 aa14.63□□□□□ -0.07
NEDD1-211ENST00000557454 PDE3BQ13370 1112 aa14.62□□□□□ -0.07
NEDD1-211ENST00000557454 STK26Q9P289 416 aa14.62□□□□□ -0.07
NEDD1-211ENST00000557454 TECPR2O15040 1411 aa14.61□□□□□ -0.07
NEDD1-211ENST00000557454 SHANK3Q9BYB0 1731 aa14.61□□□□□ -0.07
NEDD1-211ENST00000557454 PRDM11Q9NQV5 511 aa14.6□□□□□ -0.07
NEDD1-211ENST00000557454 USP35Q9P2H5 1018 aa14.6□□□□□ -0.07
NEDD1-211ENST00000557454 STRN4Q9NRL3 753 aa14.59□□□□□ -0.07
NEDD1-211ENST00000557454 GPR162Q16538 588 aa14.58□□□□□ -0.08
NEDD1-211ENST00000557454 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.08
NEDD1-211ENST00000557454 HSPA6P17066 643 aa14.57□□□□□ -0.08
NEDD1-211ENST00000557454 SGIP1Q9BQI5 828 aa14.57□□□□□ -0.08
NEDD1-211ENST00000557454 BCL11BQ9C0K0 894 aaPredicted RBP14.57□□□□□ -0.08
NEDD1-211ENST00000557454 CAPN15O75808 1086 aa14.56□□□□□ -0.08
NEDD1-211ENST00000557454 CHRNA2Q15822 529 aa14.55□□□□□ -0.08
NEDD1-211ENST00000557454 PMFBP1Q8TBY8 1022 aa14.55□□□□□ -0.08
NEDD1-211ENST00000557454 BARGINQ6ZT62 677 aa14.54□□□□□ -0.08
NEDD1-211ENST00000557454 MTFR1LQ9H019 292 aa14.54□□□□□ -0.08
NEDD1-211ENST00000557454 ABCC11Q96J66 1382 aa14.54□□□□□ -0.08
NEDD1-211ENST00000557454 MAP3K5Q99683 1374 aa14.54□□□□□ -0.08
NEDD1-211ENST00000557454 RGPD8O14715 1765 aaPredicted RBP14.54□□□□□ -0.08
NEDD1-211ENST00000557454 KIF1BO60333 1816 aa14.54□□□□□ -0.08
NEDD1-211ENST00000557454 RGPD3A6NKT7 1758 aaPredicted RBP14.53□□□□□ -0.08
NEDD1-211ENST00000557454 RGPD4Q7Z3J3 1758 aa14.53□□□□□ -0.08
NEDD1-211ENST00000557454 TRPM3Q9HCF6 1732 aaPredicted RBP14.53□□□□□ -0.08
NEDD1-211ENST00000557454 ROCK1Q13464 1354 aa14.53□□□□□ -0.08
NEDD1-211ENST00000557454 KIAA0232Q92628 1395 aa14.53□□□□□ -0.08
NEDD1-211ENST00000557454 RPGRIP1LQ68CZ1 1315 aa14.53□□□□□ -0.08
NEDD1-211ENST00000557454 PLSCR1O15162 318 aa14.53□□□□□ -0.08
NEDD1-211ENST00000557454 ARXQ96QS3 562 aa14.53□□□□□ -0.08
NEDD1-211ENST00000557454 IFT172Q9UG01 1749 aa14.52□□□□□ -0.08
NEDD1-211ENST00000557454 ALS2Q96Q42 1657 aa14.52□□□□□ -0.08
NEDD1-211ENST00000557454 PELP1Q8IZL8 1130 aaKnown RBP14.52□□□□□ -0.09
NEDD1-211ENST00000557454 SSH2Q76I76 1423 aa14.51□□□□□ -0.09
NEDD1-211ENST00000557454 TMEM132EQ6IEE7 984 aa14.51□□□□□ -0.09
NEDD1-211ENST00000557454 PROM2Q8N271 834 aa14.51□□□□□ -0.09
NEDD1-211ENST00000557454 STK32BQ9NY57 414 aa14.51□□□□□ -0.09
NEDD1-211ENST00000557454 CRYBG1Q9Y4K1 1723 aa14.51□□□□□ -0.09
NEDD1-211ENST00000557454 KNDC1Q76NI1 1749 aa14.5□□□□□ -0.09
NEDD1-211ENST00000557454 APLP2Q06481 763 aa14.5□□□□□ -0.09
NEDD1-211ENST00000557454 MAPK8IP2Q13387 824 aaPredicted RBP14.5□□□□□ -0.09
NEDD1-211ENST00000557454 PTF1AQ7RTS3 328 aa14.5□□□□□ -0.09
NEDD1-211ENST00000557454 OVOS2A0A0G2JMS6 1433 aa14.49□□□□□ -0.09
NEDD1-211ENST00000557454 OVOS2A0A0J9YW53 1432 aa14.49□□□□□ -0.09
NEDD1-211ENST00000557454 OVOS2Q6IE36 1432 aa14.49□□□□□ -0.09
NEDD1-211ENST00000557454 ATP10DQ9P241 1426 aa14.49□□□□□ -0.09
NEDD1-211ENST00000557454 ADGRF5Q8IZF2 1346 aa14.49□□□□□ -0.09
NEDD1-211ENST00000557454 TCP11L2Q8N4U5 519 aa14.49□□□□□ -0.09
NEDD1-211ENST00000557454 PPLO60437 1756 aa14.49□□□□□ -0.09
NEDD1-211ENST00000557454 SLC15A2Q16348 729 aa14.48□□□□□ -0.09
NEDD1-211ENST00000557454 LARP1Q6PKG0 1096 aaKnown RBP14.48□□□□□ -0.09
NEDD1-211ENST00000557454 GPRASP1Q5JY77 1395 aa14.47□□□□□ -0.09
NEDD1-211ENST00000557454 YTHDC2Q9H6S0 1430 aaKnown RBP14.47□□□□□ -0.09
NEDD1-211ENST00000557454 ACIN1Q9UKV3 1341 aaKnown RBP14.46□□□□□ -0.09
NEDD1-211ENST00000557454 C11orf95C9JLR9 678 aaPredicted RBP14.46□□□□□ -0.09
NEDD1-211ENST00000557454 EVA1CP58658 441 aa14.46□□□□□ -0.09
NEDD1-211ENST00000557454 ZC3H6P61129 1189 aaKnown RBP14.46□□□□□ -0.09
NEDD1-211ENST00000557454 KLHL34Q8N239 644 aa14.46□□□□□ -0.09
NEDD1-211ENST00000557454 ANKARQ7Z5J8 1434 aa14.46□□□□□ -0.09
NEDD1-211ENST00000557454 PEAK1Q9H792 1746 aa14.46□□□□□ -0.1
NEDD1-211ENST00000557454 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
NEDD1-211ENST00000557454 SLC34A2O95436 690 aa14.45□□□□□ -0.1
NEDD1-211ENST00000557454 SAFB2Q14151 953 aaKnown RBP eCLIP14.45□□□□□ -0.1
NEDD1-211ENST00000557454 COL13A1Q5TAT6 717 aaPredicted RBP14.45□□□□□ -0.1
NEDD1-211ENST00000557454 GPBP1L1Q9HC44 474 aaPredicted RBP14.45□□□□□ -0.1
NEDD1-211ENST00000557454 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
NEDD1-211ENST00000557454 TXNRD1Q16881 649 aa14.44□□□□□ -0.1
NEDD1-211ENST00000557454 PARP4Q9UKK3 1724 aaKnown RBP14.44□□□□□ -0.1
NEDD1-211ENST00000557454 PRELPP51888 382 aa14.43□□□□□ -0.1
NEDD1-211ENST00000557454 THRAP3Q9Y2W1 955 aaKnown RBP14.42□□□□□ -0.1
NEDD1-211ENST00000557454 ATP7BP35670 1465 aa14.42□□□□□ -0.1
NEDD1-211ENST00000557454 NLGN2Q8NFZ4 835 aa14.41□□□□□ -0.1
NEDD1-211ENST00000557454 ZNF526Q8TF50 670 aaPredicted RBP14.41□□□□□ -0.1
NEDD1-211ENST00000557454 PHRF1Q9P1Y6 1649 aaKnown RBP14.41□□□□□ -0.1
NEDD1-211ENST00000557454 YBX3P16989 372 aaKnown RBP eCLIP14.4□□□□□ -0.13e-8■□□□□ 10.5
NEDD1-211ENST00000557454 SIRT1Q96EB6 747 aa14.4□□□□□ -0.1
NEDD1-211ENST00000557454 SBF2Q86WG5 1849 aa14.4□□□□□ -0.1
NEDD1-211ENST00000557454 DHX57Q6P158 1386 aaKnown RBP14.39□□□□□ -0.11
NEDD1-211ENST00000557454 TNS4Q8IZW8 715 aa14.39□□□□□ -0.11
NEDD1-211ENST00000557454 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
NEDD1-211ENST00000557454 PRAM1Q96QH2 718 aa14.39□□□□□ -0.11
NEDD1-211ENST00000557454 LRRC37A3O60309 1634 aa14.39□□□□□ -0.11
NEDD1-211ENST00000557454 PRR36Q9H6K5 1346 aa14.39□□□□□ -0.11
NEDD1-211ENST00000557454 GRIN3BO60391 1043 aa14.38□□□□□ -0.11
NEDD1-211ENST00000557454 ITGAEP38570 1179 aa14.38□□□□□ -0.11
NEDD1-211ENST00000557454 NUTM2GQ5VZR2 741 aa14.38□□□□□ -0.11
NEDD1-211ENST00000557454 PIK3C2GO75747 1445 aa14.38□□□□□ -0.11
NEDD1-211ENST00000557454 APLP1P51693 650 aa14.37□□□□□ -0.11
NEDD1-211ENST00000557454 DNAJC5GQ8N7S2 189 aa14.37□□□□□ -0.11
NEDD1-211ENST00000557454 NGDNQ8NEJ9 315 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms