RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 BRWD3Q6RI45 1802 aa25.02■■□□□ 1.6
NEDD1-210ENST00000557400 ALS2Q96Q42 1657 aa25.01■■□□□ 1.59
NEDD1-210ENST00000557400 FAM98CQ17RN3 349 aaKnown RBP25.01■■□□□ 1.59
NEDD1-210ENST00000557400 PAK3O75914 559 aaPredicted RBP25■■□□□ 1.59
NEDD1-210ENST00000557400 NRAPQ86VF7 1730 aa24.98■■□□□ 1.59
NEDD1-210ENST00000557400 ATP7BP35670 1465 aa24.98■■□□□ 1.59
NEDD1-210ENST00000557400 COL14A1Q05707 1796 aaKnown RBP24.98■■□□□ 1.59
NEDD1-210ENST00000557400 NUDT16Q96DE0 195 aaKnown RBP24.97■■□□□ 1.59
NEDD1-210ENST00000557400 PRDM11Q9NQV5 511 aa24.97■■□□□ 1.59
NEDD1-210ENST00000557400 SPATA31A5Q5VU36 1347 aa24.95■■□□□ 1.58
NEDD1-210ENST00000557400 SPATA31A7Q8IWB4 1347 aa24.95■■□□□ 1.58
NEDD1-210ENST00000557400 BAG6P46379 1132 aa24.94■■□□□ 1.58
NEDD1-210ENST00000557400 ARHGEF28Q8N1W1 1705 aaKnown RBP24.92■■□□□ 1.58
NEDD1-210ENST00000557400 CDK19Q9BWU1 502 aa24.91■■□□□ 1.58
NEDD1-210ENST00000557400 KIAA0232Q92628 1395 aa24.91■■□□□ 1.58
NEDD1-210ENST00000557400 CRYBG1Q9Y4K1 1723 aa24.9■■□□□ 1.58
NEDD1-210ENST00000557400 POLR3AO14802 1390 aaPredicted RBP24.89■■□□□ 1.57
NEDD1-210ENST00000557400 CCDC61Q9Y6R9 512 aa24.88■■□□□ 1.57
NEDD1-210ENST00000557400 ITSN1Q15811 1721 aa24.88■■□□□ 1.57
NEDD1-210ENST00000557400 CHRNA2Q15822 529 aa24.87■■□□□ 1.57
NEDD1-210ENST00000557400 FAM182BQ5T319 152 aa24.87■■□□□ 1.57
NEDD1-210ENST00000557400 ACEP12821 1306 aa24.86■■□□□ 1.57
NEDD1-210ENST00000557400 SPATA31A1Q5TZJ5 1347 aa24.86■■□□□ 1.57
NEDD1-210ENST00000557400 THSD7AQ9UPZ6 1657 aa24.85■■□□□ 1.57
NEDD1-210ENST00000557400 ZC3H6P61129 1189 aaKnown RBP24.85■■□□□ 1.57
NEDD1-210ENST00000557400 NBPF8Q3BBV2 869 aa24.85■■□□□ 1.57
NEDD1-210ENST00000557400 NUTM2GQ5VZR2 741 aa24.85■■□□□ 1.57
NEDD1-210ENST00000557400 PLEKHG3A1L390 1219 aa24.84■■□□□ 1.57
NEDD1-210ENST00000557400 STRN4Q9NRL3 753 aa24.84■■□□□ 1.57
NEDD1-210ENST00000557400 EN1Q05925 392 aaPredicted RBP24.83■■□□□ 1.57
NEDD1-210ENST00000557400 PSDA5PKW4 1024 aaPredicted RBP24.82■■□□□ 1.56
NEDD1-210ENST00000557400 DISP2A7MBM2 1401 aa24.82■■□□□ 1.56
NEDD1-210ENST00000557400 PHRF1Q9P1Y6 1649 aaKnown RBP24.81■■□□□ 1.56
NEDD1-210ENST00000557400 TOPAZ1Q8N9V7 1692 aa24.81■■□□□ 1.56
NEDD1-210ENST00000557400 NBPF1Q3BBV0 1214 aa24.8■■□□□ 1.56
NEDD1-210ENST00000557400 LRP5O75197 1615 aa24.79■■□□□ 1.56
NEDD1-210ENST00000557400 KIAA1210Q9ULL0 1709 aa24.79■■□□□ 1.56
NEDD1-210ENST00000557400 ABTB2Q8N961 1025 aa24.79■■□□□ 1.56
NEDD1-210ENST00000557400 FAM196AQ6ZSG2 479 aa24.78■■□□□ 1.56
NEDD1-210ENST00000557400 RGPD1P0DJD0 1748 aa24.78■■□□□ 1.56
NEDD1-210ENST00000557400 SSH2Q76I76 1423 aa24.78■■□□□ 1.56
NEDD1-210ENST00000557400 EVA1CP58658 441 aa24.77■■□□□ 1.56
NEDD1-210ENST00000557400 USP19O94966 1318 aa24.77■■□□□ 1.56
NEDD1-210ENST00000557400 CPDO75976 1380 aa24.77■■□□□ 1.56
NEDD1-210ENST00000557400 SRPK2P78362 688 aaKnown RBP24.76■■□□□ 1.55
NEDD1-210ENST00000557400 BARGINQ6ZT62 677 aa24.76■■□□□ 1.55
NEDD1-210ENST00000557400 USP35Q9P2H5 1018 aa24.76■■□□□ 1.55
NEDD1-210ENST00000557400 CENPJQ9HC77 1338 aaPredicted RBP24.76■■□□□ 1.55
NEDD1-210ENST00000557400 NRKQ7Z2Y5 1582 aa24.76■■□□□ 1.55
NEDD1-210ENST00000557400 TRIM37O94972 964 aa24.74■■□□□ 1.55
NEDD1-210ENST00000557400 NLRP13Q86W25 1043 aa24.74■■□□□ 1.55
NEDD1-210ENST00000557400 PPIP5K1Q6PFW1 1433 aa24.74■■□□□ 1.55
NEDD1-210ENST00000557400 EZH2Q15910 746 aaKnown RBP24.73■■□□□ 1.55
NEDD1-210ENST00000557400 CAMTA1Q9Y6Y1 1673 aa24.72■■□□□ 1.55
NEDD1-210ENST00000557400 R3HDM1Q15032 1099 aaKnown RBP24.72■■□□□ 1.55
NEDD1-210ENST00000557400 LARP1Q6PKG0 1096 aaKnown RBP24.72■■□□□ 1.55
NEDD1-210ENST00000557400 BRD4O60885 1362 aaPredicted RBP24.71■■□□□ 1.55
NEDD1-210ENST00000557400 GCP02774 474 aa24.71■■□□□ 1.55
NEDD1-210ENST00000557400 PDE3BQ13370 1112 aa24.71■■□□□ 1.55
NEDD1-210ENST00000557400 TCP11L2Q8N4U5 519 aa24.71■■□□□ 1.55
NEDD1-210ENST00000557400 CAMKK2Q96RR4 588 aa24.71■■□□□ 1.55
NEDD1-210ENST00000557400 CABP2Q9NPB3 220 aa24.71■■□□□ 1.55
NEDD1-210ENST00000557400 TNS1Q9HBL0 1735 aaKnown RBP24.71■■□□□ 1.55
NEDD1-210ENST00000557400 PARD3Q8TEW0 1356 aa24.69■■□□□ 1.54
NEDD1-210ENST00000557400 LMO7Q8WWI1 1683 aa24.69■■□□□ 1.54
NEDD1-210ENST00000557400 APBA3O96018 575 aa24.68■■□□□ 1.54
NEDD1-210ENST00000557400 THRAP3Q9Y2W1 955 aaKnown RBP24.68■■□□□ 1.54
NEDD1-210ENST00000557400 CABP1Q9NZU7 370 aa24.66■■□□□ 1.54
NEDD1-210ENST00000557400 COL5A2P05997 1499 aaPredicted RBP24.65■■□□□ 1.54
NEDD1-210ENST00000557400 USP6P35125 1406 aa24.65■■□□□ 1.54
NEDD1-210ENST00000557400 NLRP6P59044 892 aa24.63■■□□□ 1.53
NEDD1-210ENST00000557400 L3MBTL2Q969R5 705 aa24.63■■□□□ 1.53
NEDD1-210ENST00000557400 CRB1P82279 1406 aa24.61■■□□□ 1.53
NEDD1-210ENST00000557400 AATKQ6ZMQ8 1374 aa24.61■■□□□ 1.53
NEDD1-210ENST00000557400 QRICH2Q9H0J4 1663 aa24.6■■□□□ 1.53
NEDD1-210ENST00000557400 ZBTB7CA1YPR0 619 aa24.6■■□□□ 1.53
NEDD1-210ENST00000557400 EVC2Q86UK5 1308 aa24.6■■□□□ 1.53
NEDD1-210ENST00000557400 SLIT3O75094 1523 aa24.59■■□□□ 1.53
NEDD1-210ENST00000557400 C11orf95C9JLR9 678 aaPredicted RBP24.58■■□□□ 1.53
NEDD1-210ENST00000557400 NBPF14Q5TI25 921 aa24.55■■□□□ 1.52
NEDD1-210ENST00000557400 OVOS2A0A0G2JMS6 1433 aa24.54■■□□□ 1.52
NEDD1-210ENST00000557400 OVOS2A0A0J9YW53 1432 aa24.54■■□□□ 1.52
NEDD1-210ENST00000557400 OVOS2Q6IE36 1432 aa24.54■■□□□ 1.52
NEDD1-210ENST00000557400 PARP4Q9UKK3 1724 aaKnown RBP24.54■■□□□ 1.52
NEDD1-210ENST00000557400 ROCK2O75116 1388 aaKnown RBP24.54■■□□□ 1.52
NEDD1-210ENST00000557400 TOM1L2Q6ZVM7 507 aa24.53■■□□□ 1.52
NEDD1-210ENST00000557400 RREB1Q92766 1687 aa24.53■■□□□ 1.52
NEDD1-210ENST00000557400 SIN3AQ96ST3 1273 aa24.52■■□□□ 1.52
NEDD1-210ENST00000557400 ZNF692Q9BU19 519 aaPredicted RBP24.52■■□□□ 1.52
NEDD1-210ENST00000557400 PIK3C2AO00443 1686 aa24.51■■□□□ 1.51
NEDD1-210ENST00000557400 DDB1Q16531 1140 aa24.51■■□□□ 1.51
NEDD1-210ENST00000557400 TTC21BQ7Z4L5 1316 aa24.51■■□□□ 1.51
NEDD1-210ENST00000557400 WDR17Q8IZU2 1322 aa24.51■■□□□ 1.51
NEDD1-210ENST00000557400 CPSF1Q10570 1443 aaKnown RBP24.51■■□□□ 1.51
NEDD1-210ENST00000557400 AXIN2Q9Y2T1 843 aa24.5■■□□□ 1.51
NEDD1-210ENST00000557400 TRPM1Q7Z4N2 1603 aa24.5■■□□□ 1.51
NEDD1-210ENST00000557400 ARHGEF25Q86VW2 580 aa24.49■■□□□ 1.51
NEDD1-210ENST00000557400 KCNH5Q8NCM2 988 aa24.49■■□□□ 1.51
NEDD1-210ENST00000557400 NUP188Q5SRE5 1749 aa24.49■■□□□ 1.51
NEDD1-210ENST00000557400 TTC21AQ8NDW8 1320 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms