RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 KIAA1210Q9ULL0 1709 aa22.96■■□□□ 1.27
TUBB3-213ENST00000557262 PLEKHG3A1L390 1219 aa22.95■■□□□ 1.26
TUBB3-213ENST00000557262 NBPF8Q3BBV2 869 aa22.95■■□□□ 1.26
TUBB3-213ENST00000557262 ACEP12821 1306 aa22.94■■□□□ 1.26
TUBB3-213ENST00000557262 ZRANB1Q9UGI0 708 aa22.94■■□□□ 1.26
TUBB3-213ENST00000557262 KRT27Q7Z3Y8 459 aa22.93■■□□□ 1.26
TUBB3-213ENST00000557262 POLR3AO14802 1390 aaPredicted RBP22.92■■□□□ 1.26
TUBB3-213ENST00000557262 BRWD3Q6RI45 1802 aa22.92■■□□□ 1.26
TUBB3-213ENST00000557262 L3MBTL2Q969R5 705 aa22.92■■□□□ 1.26
TUBB3-213ENST00000557262 PRDM11Q9NQV5 511 aa22.92■■□□□ 1.26
TUBB3-213ENST00000557262 BLMP54132 1417 aaPredicted RBP22.91■■□□□ 1.26
TUBB3-213ENST00000557262 ITSN1Q15811 1721 aa22.91■■□□□ 1.26
TUBB3-213ENST00000557262 CENPJQ9HC77 1338 aaPredicted RBP22.9■■□□□ 1.26
TUBB3-213ENST00000557262 A0A0G2JS52 829 aa22.9■■□□□ 1.26
TUBB3-213ENST00000557262 MYT1Q01538 1121 aa22.9■■□□□ 1.26
TUBB3-213ENST00000557262 FAM98CQ17RN3 349 aaKnown RBP22.9■■□□□ 1.26
TUBB3-213ENST00000557262 COL14A1Q05707 1796 aaKnown RBP22.9■■□□□ 1.26
TUBB3-213ENST00000557262 SRCAPQ6ZRS2 3230 aa22.9■■□□□ 1.26
TUBB3-213ENST00000557262 SRPK2P78362 688 aaKnown RBP22.89■■□□□ 1.25
TUBB3-213ENST00000557262 SF3B2Q13435 895 aaKnown RBP22.89■■□□□ 1.25
TUBB3-213ENST00000557262 NUTM2GQ5VZR2 741 aa22.89■■□□□ 1.25
TUBB3-213ENST00000557262 SIN3AQ96ST3 1273 aa22.88■■□□□ 1.25
TUBB3-213ENST00000557262 NRAPQ86VF7 1730 aa22.88■■□□□ 1.25
TUBB3-213ENST00000557262 SPATA31A5Q5VU36 1347 aa22.87■■□□□ 1.25
TUBB3-213ENST00000557262 SPATA31A7Q8IWB4 1347 aa22.87■■□□□ 1.25
TUBB3-213ENST00000557262 CRYBG1Q9Y4K1 1723 aa22.86■■□□□ 1.25
TUBB3-213ENST00000557262 ZC3H6P61129 1189 aaKnown RBP22.86■■□□□ 1.25
TUBB3-213ENST00000557262 ABTB2Q8N961 1025 aa22.86■■□□□ 1.25
TUBB3-213ENST00000557262 CABP2Q9NPB3 220 aa22.86■■□□□ 1.25
TUBB3-213ENST00000557262 KIAA0232Q92628 1395 aa22.86■■□□□ 1.25
TUBB3-213ENST00000557262 CHRNA2Q15822 529 aa22.85■■□□□ 1.25
TUBB3-213ENST00000557262 NEUROD1Q13562 356 aa22.84■■□□□ 1.25
TUBB3-213ENST00000557262 DEFB132Q7Z7B7 95 aa22.84■■□□□ 1.25
TUBB3-213ENST00000557262 TOPAZ1Q8N9V7 1692 aa22.82■■□□□ 1.24
TUBB3-213ENST00000557262 NLRP13Q86W25 1043 aa22.82■■□□□ 1.24
TUBB3-213ENST00000557262 PPIP5K1Q6PFW1 1433 aa22.82■■□□□ 1.24
TUBB3-213ENST00000557262 STRN4Q9NRL3 753 aa22.81■■□□□ 1.24
TUBB3-213ENST00000557262 EVA1CP58658 441 aa22.8■■□□□ 1.24
TUBB3-213ENST00000557262 CABP1Q9NZU7 370 aa22.8■■□□□ 1.24
TUBB3-213ENST00000557262 SPATA31A1Q5TZJ5 1347 aa22.8■■□□□ 1.24
TUBB3-213ENST00000557262 BRD4O60885 1362 aaPredicted RBP22.78■■□□□ 1.24
TUBB3-213ENST00000557262 GCP02774 474 aa22.77■■□□□ 1.24
TUBB3-213ENST00000557262 PHRF1Q9P1Y6 1649 aaKnown RBP22.77■■□□□ 1.24
TUBB3-213ENST00000557262 USP19O94966 1318 aa22.77■■□□□ 1.24
TUBB3-213ENST00000557262 EVC2Q86UK5 1308 aa22.77■■□□□ 1.24
TUBB3-213ENST00000557262 BAG6P46379 1132 aa22.76■■□□□ 1.23
TUBB3-213ENST00000557262 FAM182BQ5T319 152 aa22.76■■□□□ 1.23
TUBB3-213ENST00000557262 ROCK2O75116 1388 aaKnown RBP22.75■■□□□ 1.23
TUBB3-213ENST00000557262 CPDO75976 1380 aa22.75■■□□□ 1.23
TUBB3-213ENST00000557262 QRICH2Q9H0J4 1663 aa22.74■■□□□ 1.23
TUBB3-213ENST00000557262 NLRP6P59044 892 aa22.73■■□□□ 1.23
TUBB3-213ENST00000557262 USP35Q9P2H5 1018 aa22.73■■□□□ 1.23
TUBB3-213ENST00000557262 THSD7AQ9UPZ6 1657 aa22.72■■□□□ 1.23
TUBB3-213ENST00000557262 BARGINQ6ZT62 677 aa22.72■■□□□ 1.23
TUBB3-213ENST00000557262 TRPM1Q7Z4N2 1603 aa22.71■■□□□ 1.23
TUBB3-213ENST00000557262 LARP1Q6PKG0 1096 aaKnown RBP22.71■■□□□ 1.23
TUBB3-213ENST00000557262 ZNF692Q9BU19 519 aaPredicted RBP22.71■■□□□ 1.23
TUBB3-213ENST00000557262 USP6P35125 1406 aa22.71■■□□□ 1.23
TUBB3-213ENST00000557262 SSH2Q76I76 1423 aa22.71■■□□□ 1.23
TUBB3-213ENST00000557262 FAM196AQ6ZSG2 479 aa22.7■■□□□ 1.22
TUBB3-213ENST00000557262 NRKQ7Z2Y5 1582 aa22.7■■□□□ 1.22
TUBB3-213ENST00000557262 CAMTA1Q9Y6Y1 1673 aa22.7■■□□□ 1.22
TUBB3-213ENST00000557262 TCP11L2Q8N4U5 519 aa22.69■■□□□ 1.22
TUBB3-213ENST00000557262 EN1Q05925 392 aaPredicted RBP22.68■■□□□ 1.22
TUBB3-213ENST00000557262 PDE3BQ13370 1112 aa22.67■■□□□ 1.22
TUBB3-213ENST00000557262 THRAP3Q9Y2W1 955 aaKnown RBP22.67■■□□□ 1.22
TUBB3-213ENST00000557262 ZBTB7CA1YPR0 619 aa22.65■■□□□ 1.22
TUBB3-213ENST00000557262 TRIM37O94972 964 aa22.64■■□□□ 1.21
TUBB3-213ENST00000557262 RGPD1P0DJD0 1748 aa22.64■■□□□ 1.21
TUBB3-213ENST00000557262 LMO7Q8WWI1 1683 aa22.64■■□□□ 1.21
TUBB3-213ENST00000557262 TTC21BQ7Z4L5 1316 aa22.63■■□□□ 1.21
TUBB3-213ENST00000557262 AATKQ6ZMQ8 1374 aa22.63■■□□□ 1.21
TUBB3-213ENST00000557262 CARD11Q9BXL7 1154 aa22.62■■□□□ 1.21
TUBB3-213ENST00000557262 COL5A2P05997 1499 aaPredicted RBP22.6■■□□□ 1.21
TUBB3-213ENST00000557262 TTC21AQ8NDW8 1320 aa22.6■■□□□ 1.21
TUBB3-213ENST00000557262 DISP2A7MBM2 1401 aa22.6■■□□□ 1.21
TUBB3-213ENST00000557262 PSDA5PKW4 1024 aaPredicted RBP22.6■■□□□ 1.21
TUBB3-213ENST00000557262 KCNH5Q8NCM2 988 aa22.6■■□□□ 1.21
TUBB3-213ENST00000557262 SLIT3O75094 1523 aa22.6■■□□□ 1.21
TUBB3-213ENST00000557262 APBA3O96018 575 aa22.59■■□□□ 1.21
TUBB3-213ENST00000557262 EZH2Q15910 746 aaKnown RBP22.59■■□□□ 1.21
TUBB3-213ENST00000557262 CAMKK2Q96RR4 588 aa22.59■■□□□ 1.21
TUBB3-213ENST00000557262 CRB1P82279 1406 aa22.58■■□□□ 1.21
TUBB3-213ENST00000557262 CPSF1Q10570 1443 aaKnown RBP22.58■■□□□ 1.21
TUBB3-213ENST00000557262 TNS1Q9HBL0 1735 aaKnown RBP22.57■■□□□ 1.2
TUBB3-213ENST00000557262 TOM1L2Q6ZVM7 507 aa22.57■■□□□ 1.2
TUBB3-213ENST00000557262 ARHGEF25Q86VW2 580 aa22.57■■□□□ 1.2
TUBB3-213ENST00000557262 AXIN2Q9Y2T1 843 aa22.57■■□□□ 1.2
TUBB3-213ENST00000557262 KTN1Q86UP2 1357 aaKnown RBP22.57■■□□□ 1.2
TUBB3-213ENST00000557262 TONSLQ96HA7 1378 aa22.57■■□□□ 1.2
TUBB3-213ENST00000557262 SBNO2Q9Y2G9 1366 aa22.57■■□□□ 1.2
TUBB3-213ENST00000557262 C11orf95C9JLR9 678 aaPredicted RBP22.56■■□□□ 1.2
TUBB3-213ENST00000557262 PIK3C2AO00443 1686 aa22.55■■□□□ 1.2
TUBB3-213ENST00000557262 SOX12O15370 315 aa22.53■■□□□ 1.2
TUBB3-213ENST00000557262 R3HDM1Q15032 1099 aaKnown RBP22.53■■□□□ 1.2
TUBB3-213ENST00000557262 WDR17Q8IZU2 1322 aa22.53■■□□□ 1.2
TUBB3-213ENST00000557262 AKAP12Q02952 1782 aa22.52■■□□□ 1.2
TUBB3-213ENST00000557262 PARD3Q8TEW0 1356 aa22.51■■□□□ 1.19
TUBB3-213ENST00000557262 COL18A1P39060 1754 aa22.51■■□□□ 1.19
TUBB3-213ENST00000557262 DDB1Q16531 1140 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms