RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 TRIM37O94972 964 aa14.36□□□□□ -0.11
RIPK3-205ENST00000557253 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
RIPK3-205ENST00000557253 CAMKK2Q96RR4 588 aa14.35□□□□□ -0.11
RIPK3-205ENST00000557253 GPRASP1Q5JY77 1395 aa14.34□□□□□ -0.11
RIPK3-205ENST00000557253 ADGRB2O60241 1585 aa14.34□□□□□ -0.11
RIPK3-205ENST00000557253 DISP2A7MBM2 1401 aa14.34□□□□□ -0.11
RIPK3-205ENST00000557253 ANKARQ7Z5J8 1434 aa14.34□□□□□ -0.11
RIPK3-205ENST00000557253 PRDM11Q9NQV5 511 aa14.34□□□□□ -0.11
RIPK3-205ENST00000557253 MINK1Q8N4C8 1332 aaPredicted RBP14.34□□□□□ -0.11
RIPK3-205ENST00000557253 PRR36Q9H6K5 1346 aa14.34□□□□□ -0.11
RIPK3-205ENST00000557253 CRYBG1Q9Y4K1 1723 aa14.33□□□□□ -0.12
RIPK3-205ENST00000557253 APBA3O96018 575 aa14.33□□□□□ -0.12
RIPK3-205ENST00000557253 YY1P25490 414 aa14.33□□□□□ -0.12
RIPK3-205ENST00000557253 CHRNA2Q15822 529 aa14.33□□□□□ -0.12
RIPK3-205ENST00000557253 STRN4Q9NRL3 753 aa14.33□□□□□ -0.12
RIPK3-205ENST00000557253 TRAK1Q9UPV9 953 aa14.33□□□□□ -0.12
RIPK3-205ENST00000557253 ACIN1Q9UKV3 1341 aaKnown RBP14.33□□□□□ -0.12
RIPK3-205ENST00000557253 NGDNQ8NEJ9 315 aaKnown RBP14.32□□□□□ -0.12
RIPK3-205ENST00000557253 USP35Q9P2H5 1018 aa14.32□□□□□ -0.12
RIPK3-205ENST00000557253 SPATA31A1Q5TZJ5 1347 aa14.32□□□□□ -0.12
RIPK3-205ENST00000557253 DLC1Q96QB1 1528 aa14.31□□□□□ -0.12
RIPK3-205ENST00000557253 FAM196AQ6ZSG2 479 aa14.31□□□□□ -0.12
RIPK3-205ENST00000557253 KIAA0232Q92628 1395 aa14.3□□□□□ -0.12
RIPK3-205ENST00000557253 ZC3H6P61129 1189 aaKnown RBP14.29□□□□□ -0.12
RIPK3-205ENST00000557253 NUTM2GQ5VZR2 741 aa14.29□□□□□ -0.12
RIPK3-205ENST00000557253 WASLO00401 505 aaPredicted RBP14.28□□□□□ -0.12
RIPK3-205ENST00000557253 NUP188Q5SRE5 1749 aa14.28□□□□□ -0.12
RIPK3-205ENST00000557253 RREB1Q92766 1687 aa14.28□□□□□ -0.12
RIPK3-205ENST00000557253 TULP4Q9NRJ4 1543 aa14.28□□□□□ -0.12
RIPK3-205ENST00000557253 ADGRB1O14514 1584 aa14.27□□□□□ -0.12
RIPK3-205ENST00000557253 PDE3BQ13370 1112 aa14.27□□□□□ -0.13
RIPK3-205ENST00000557253 PHRF1Q9P1Y6 1649 aaKnown RBP14.26□□□□□ -0.13
RIPK3-205ENST00000557253 EVA1CP58658 441 aa14.26□□□□□ -0.13
RIPK3-205ENST00000557253 NBPF8Q3BBV2 869 aa14.26□□□□□ -0.13
RIPK3-205ENST00000557253 NBPF14Q5TI25 921 aa14.26□□□□□ -0.13
RIPK3-205ENST00000557253 PPP1R1BQ9UD71 204 aaPredicted RBP14.26□□□□□ -0.13
RIPK3-205ENST00000557253 EIF3AQ14152 1382 aaKnown RBP14.25□□□□□ -0.13
RIPK3-205ENST00000557253 PARD3Q8TEW0 1356 aa14.25□□□□□ -0.13
RIPK3-205ENST00000557253 KDM2AQ9Y2K7 1162 aa14.25□□□□□ -0.13
RIPK3-205ENST00000557253 LARP1Q6PKG0 1096 aaKnown RBP14.23□□□□□ -0.13
RIPK3-205ENST00000557253 NUDT16Q96DE0 195 aaKnown RBP14.23□□□□□ -0.13
RIPK3-205ENST00000557253 SSH2Q76I76 1423 aa14.23□□□□□ -0.13
RIPK3-205ENST00000557253 KCNQ2O43526 872 aa14.22□□□□□ -0.13
RIPK3-205ENST00000557253 BARGINQ6ZT62 677 aa14.22□□□□□ -0.13
RIPK3-205ENST00000557253 SPON1Q9HCB6 807 aa14.22□□□□□ -0.13
RIPK3-205ENST00000557253 ITSN1Q15811 1721 aa14.21□□□□□ -0.13
RIPK3-205ENST00000557253 CAMTA1Q9Y6Y1 1673 aa14.21□□□□□ -0.13
RIPK3-205ENST00000557253 ATP7BP35670 1465 aa14.21□□□□□ -0.13
RIPK3-205ENST00000557253 DCAF8L1A6NGE4 600 aa14.2□□□□□ -0.14
RIPK3-205ENST00000557253 TCP11L2Q8N4U5 519 aa14.2□□□□□ -0.14
RIPK3-205ENST00000557253 DCAF11Q8TEB1 546 aa14.2□□□□□ -0.14
RIPK3-205ENST00000557253 ACEP12821 1306 aa14.18□□□□□ -0.14
RIPK3-205ENST00000557253 NRKQ7Z2Y5 1582 aa14.18□□□□□ -0.14
RIPK3-205ENST00000557253 ABTB2Q8N961 1025 aa14.18□□□□□ -0.14
RIPK3-205ENST00000557253 CDK19Q9BWU1 502 aa14.18□□□□□ -0.14
RIPK3-205ENST00000557253 ARHGEF28Q8N1W1 1705 aaKnown RBP14.18□□□□□ -0.14
RIPK3-205ENST00000557253 ZBTB7CA1YPR0 619 aa14.17□□□□□ -0.14
RIPK3-205ENST00000557253 NINLQ9Y2I6 1382 aa14.17□□□□□ -0.14
RIPK3-205ENST00000557253 LMO7Q8WWI1 1683 aa14.17□□□□□ -0.14
RIPK3-205ENST00000557253 PARP4Q9UKK3 1724 aaKnown RBP14.15□□□□□ -0.14
RIPK3-205ENST00000557253 POLR3AO14802 1390 aaPredicted RBP14.15□□□□□ -0.14
RIPK3-205ENST00000557253 PDGFDQ9GZP0 370 aaPredicted RBP14.15□□□□□ -0.14
RIPK3-205ENST00000557253 ANO8Q9HCE9 1232 aaPredicted RBP14.15□□□□□ -0.14
RIPK3-205ENST00000557253 THRAP3Q9Y2W1 955 aaKnown RBP14.15□□□□□ -0.14
RIPK3-205ENST00000557253 TOPAZ1Q8N9V7 1692 aa14.14□□□□□ -0.15
RIPK3-205ENST00000557253 PTF1AQ7RTS3 328 aa14.14□□□□□ -0.15
RIPK3-205ENST00000557253 COL5A2P05997 1499 aaPredicted RBP14.13□□□□□ -0.15
RIPK3-205ENST00000557253 CPDO75976 1380 aa14.13□□□□□ -0.15
RIPK3-205ENST00000557253 ZBTB7AO95365 584 aa14.13□□□□□ -0.15
RIPK3-205ENST00000557253 CCDC61Q9Y6R9 512 aa14.13□□□□□ -0.15
RIPK3-205ENST00000557253 PEAK1Q9H792 1746 aa14.12□□□□□ -0.15
RIPK3-205ENST00000557253 CASZ1Q86V15 1759 aa14.12□□□□□ -0.15
RIPK3-205ENST00000557253 PLEKHG3A1L390 1219 aa14.12□□□□□ -0.15
RIPK3-205ENST00000557253 GCP02774 474 aa14.12□□□□□ -0.15
RIPK3-205ENST00000557253 OVOS2A0A0G2JMS6 1433 aa14.12□□□□□ -0.15
RIPK3-205ENST00000557253 OVOS2A0A0J9YW53 1432 aa14.12□□□□□ -0.15
RIPK3-205ENST00000557253 OVOS2Q6IE36 1432 aa14.12□□□□□ -0.15
RIPK3-205ENST00000557253 USP19O94966 1318 aa14.12□□□□□ -0.15
RIPK3-205ENST00000557253 SBF2Q86WG5 1849 aa14.11□□□□□ -0.15
RIPK3-205ENST00000557253 PLSCR1O15162 318 aa14.11□□□□□ -0.15
RIPK3-205ENST00000557253 CRB1P82279 1406 aa14.11□□□□□ -0.15
RIPK3-205ENST00000557253 NLRP13Q86W25 1043 aa14.11□□□□□ -0.15
RIPK3-205ENST00000557253 BCL11BQ9C0K0 894 aaPredicted RBP14.11□□□□□ -0.15
RIPK3-205ENST00000557253 ATF5Q9Y2D1 282 aaPredicted RBP14.11□□□□□ -0.15
RIPK3-205ENST00000557253 LRRC37A3O60309 1634 aa14.11□□□□□ -0.15
RIPK3-205ENST00000557253 MYOM1P52179 1685 aa14.1□□□□□ -0.15
RIPK3-205ENST00000557253 RAB3GAP2Q9H2M9 1393 aa14.1□□□□□ -0.15
RIPK3-205ENST00000557253 DDB1Q16531 1140 aa14.1□□□□□ -0.15
RIPK3-205ENST00000557253 RGPD3A6NKT7 1758 aaPredicted RBP14.09□□□□□ -0.15
RIPK3-205ENST00000557253 RGPD4Q7Z3J3 1758 aa14.09□□□□□ -0.15
RIPK3-205ENST00000557253 C11orf95C9JLR9 678 aaPredicted RBP14.09□□□□□ -0.15
RIPK3-205ENST00000557253 PROM2Q8N271 834 aa14.09□□□□□ -0.15
RIPK3-205ENST00000557253 ZNF784Q8NCA9 323 aaPredicted RBP14.09□□□□□ -0.15
RIPK3-205ENST00000557253 PTGER2P43116 358 aa14.08□□□□□ -0.16
RIPK3-205ENST00000557253 TOM1L2Q6ZVM7 507 aa14.08□□□□□ -0.16
RIPK3-205ENST00000557253 PPIP5K1Q6PFW1 1433 aa14.07□□□□□ -0.16
RIPK3-205ENST00000557253 UTRNP46939 3433 aa14.07□□□□□ -0.16
RIPK3-205ENST00000557253 SRPK2P78362 688 aaKnown RBP14.07□□□□□ -0.16
RIPK3-205ENST00000557253 MARCH10Q8NA82 808 aaPredicted RBP14.07□□□□□ -0.16
RIPK3-205ENST00000557253 CABP2Q9NPB3 220 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms