RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 PTGER2P43116 358 aa18.99■□□□□ 0.63
PSEN1-219ENST00000556951 RGL3Q3MIN7 710 aa18.99■□□□□ 0.63
PSEN1-219ENST00000556951 FHDC1Q9C0D6 1143 aaPredicted RBP18.99■□□□□ 0.63
PSEN1-219ENST00000556951 PHF8Q9UPP1 1060 aa18.99■□□□□ 0.63
PSEN1-219ENST00000556951 SPATA31E1Q6ZUB1 1445 aa18.99■□□□□ 0.63
PSEN1-219ENST00000556951 HSPA6P17066 643 aa18.98■□□□□ 0.63
PSEN1-219ENST00000556951 TNS3Q68CZ2 1445 aa18.98■□□□□ 0.63
PSEN1-219ENST00000556951 CAPN15O75808 1086 aa18.97■□□□□ 0.63
PSEN1-219ENST00000556951 TRIM26Q12899 539 aaPredicted RBP18.97■□□□□ 0.63
PSEN1-219ENST00000556951 DLC1Q96QB1 1528 aa18.96■□□□□ 0.63
PSEN1-219ENST00000556951 KIF1AQ12756 1690 aa18.96■□□□□ 0.63
PSEN1-219ENST00000556951 PLEKHG5O94827 1062 aa18.96■□□□□ 0.63
PSEN1-219ENST00000556951 PSME1Q06323 249 aa18.96■□□□□ 0.63
PSEN1-219ENST00000556951 YTHDC2Q9H6S0 1430 aaKnown RBP18.96■□□□□ 0.63
PSEN1-219ENST00000556951 SPATA31A5Q5VU36 1347 aa18.96■□□□□ 0.63
PSEN1-219ENST00000556951 SPATA31A7Q8IWB4 1347 aa18.96■□□□□ 0.63
PSEN1-219ENST00000556951 SBNO1A3KN83 1393 aa18.95■□□□□ 0.62
PSEN1-219ENST00000556951 RGPD8O14715 1765 aaPredicted RBP18.95■□□□□ 0.62
PSEN1-219ENST00000556951 ANKRD30BQ9BXX2 1392 aa18.94■□□□□ 0.62
PSEN1-219ENST00000556951 KNDC1Q76NI1 1749 aa18.94■□□□□ 0.62
PSEN1-219ENST00000556951 BTG4Q9NY30 223 aa18.94■□□□□ 0.62
PSEN1-219ENST00000556951 PIK3C2GO75747 1445 aa18.93■□□□□ 0.62
PSEN1-219ENST00000556951 NRXN1Q9ULB1 1477 aa18.92■□□□□ 0.62
PSEN1-219ENST00000556951 ZBTB7AO95365 584 aa18.92■□□□□ 0.62
PSEN1-219ENST00000556951 PDGFDQ9GZP0 370 aaPredicted RBP18.92■□□□□ 0.62
PSEN1-219ENST00000556951 C14orf93Q9H972 538 aaKnown RBP18.92■□□□□ 0.62
PSEN1-219ENST00000556951 IFT172Q9UG01 1749 aa18.91■□□□□ 0.62
PSEN1-219ENST00000556951 LMOD2Q6P5Q4 547 aa18.91■□□□□ 0.62
PSEN1-219ENST00000556951 PRELPP51888 382 aa18.9■□□□□ 0.62
PSEN1-219ENST00000556951 PCDH10Q9P2E7 1040 aa18.9■□□□□ 0.62
PSEN1-219ENST00000556951 COL14A1Q05707 1796 aaKnown RBP18.9■□□□□ 0.62
PSEN1-219ENST00000556951 PMFBP1Q8TBY8 1022 aa18.89■□□□□ 0.61
PSEN1-219ENST00000556951 ARHGEF10O15013 1369 aa18.89■□□□□ 0.61
PSEN1-219ENST00000556951 GOLGB1Q14789 3259 aaKnown RBP18.88■□□□□ 0.61
PSEN1-219ENST00000556951 CFAP70Q5T0N1 1121 aa18.88■□□□□ 0.61
PSEN1-219ENST00000556951 ATF5Q9Y2D1 282 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-219ENST00000556951 RGPD3A6NKT7 1758 aaPredicted RBP18.87■□□□□ 0.61
PSEN1-219ENST00000556951 RGPD4Q7Z3J3 1758 aa18.87■□□□□ 0.61
PSEN1-219ENST00000556951 ANO8Q9HCE9 1232 aaPredicted RBP18.87■□□□□ 0.61
PSEN1-219ENST00000556951 SAFB2Q14151 953 aaKnown RBP eCLIP18.86■□□□□ 0.61
PSEN1-219ENST00000556951 GPR162Q16538 588 aa18.86■□□□□ 0.61
PSEN1-219ENST00000556951 COL13A1Q5TAT6 717 aaPredicted RBP18.86■□□□□ 0.61
PSEN1-219ENST00000556951 PRAM1Q96QH2 718 aa18.85■□□□□ 0.61
PSEN1-219ENST00000556951 MPHOSPH9Q99550 1183 aa18.85■□□□□ 0.61
PSEN1-219ENST00000556951 PCGF6Q9BYE7 350 aa18.85■□□□□ 0.61
PSEN1-219ENST00000556951 DHX57Q6P158 1386 aaKnown RBP18.83■□□□□ 0.61
PSEN1-219ENST00000556951 MAP3K5Q99683 1374 aa18.83■□□□□ 0.61
PSEN1-219ENST00000556951 SGIP1Q9BQI5 828 aa18.82■□□□□ 0.6
PSEN1-219ENST00000556951 TRPM3Q9HCF6 1732 aaPredicted RBP18.82■□□□□ 0.6
PSEN1-219ENST00000556951 SPATA31A1Q5TZJ5 1347 aa18.81■□□□□ 0.6
PSEN1-219ENST00000556951 PRR36Q9H6K5 1346 aa18.81■□□□□ 0.6
PSEN1-219ENST00000556951 ANKARQ7Z5J8 1434 aa18.81■□□□□ 0.6
PSEN1-219ENST00000556951 ALS2Q96Q42 1657 aa18.79■□□□□ 0.6
PSEN1-219ENST00000556951 PDE3BQ13370 1112 aa18.79■□□□□ 0.6
PSEN1-219ENST00000556951 ACIN1Q9UKV3 1341 aaKnown RBP18.78■□□□□ 0.6
PSEN1-219ENST00000556951 PLSCR1O15162 318 aa18.77■□□□□ 0.6
PSEN1-219ENST00000556951 TNS4Q8IZW8 715 aa18.77■□□□□ 0.6
PSEN1-219ENST00000556951 MTFR1LQ9H019 292 aa18.77■□□□□ 0.6
PSEN1-219ENST00000556951 POGKQ9P215 609 aa18.77■□□□□ 0.6
PSEN1-219ENST00000556951 DNAJC5GQ8N7S2 189 aa18.76■□□□□ 0.59
PSEN1-219ENST00000556951 ARXQ96QS3 562 aa18.76■□□□□ 0.59
PSEN1-219ENST00000556951 HIRIP3Q9BW71 556 aaPredicted RBP18.76■□□□□ 0.59
PSEN1-219ENST00000556951 ATP10DQ9P241 1426 aa18.75■□□□□ 0.59
PSEN1-219ENST00000556951 GPRASP1Q5JY77 1395 aa18.75■□□□□ 0.59
PSEN1-219ENST00000556951 CRYBG1Q9Y4K1 1723 aa18.74■□□□□ 0.59
PSEN1-219ENST00000556951 BCL11BQ9C0K0 894 aaPredicted RBP18.73■□□□□ 0.59
PSEN1-219ENST00000556951 GPBP1L1Q9HC44 474 aaPredicted RBP18.73■□□□□ 0.59
PSEN1-219ENST00000556951 PRDM11Q9NQV5 511 aa18.73■□□□□ 0.59
PSEN1-219ENST00000556951 MINK1Q8N4C8 1332 aaPredicted RBP18.73■□□□□ 0.59
PSEN1-219ENST00000556951 WASLO00401 505 aaPredicted RBP18.72■□□□□ 0.59
PSEN1-219ENST00000556951 CHRNA2Q15822 529 aa18.72■□□□□ 0.59
PSEN1-219ENST00000556951 TRAK1Q9UPV9 953 aa18.72■□□□□ 0.59
PSEN1-219ENST00000556951 ADGRB1O14514 1584 aa18.72■□□□□ 0.59
PSEN1-219ENST00000556951 SBF2Q86WG5 1849 aa18.71■□□□□ 0.59
PSEN1-219ENST00000556951 KIAA0232Q92628 1395 aa18.7■□□□□ 0.58
PSEN1-219ENST00000556951 APLP1P51693 650 aa18.7■□□□□ 0.58
PSEN1-219ENST00000556951 BARGINQ6ZT62 677 aa18.7■□□□□ 0.58
PSEN1-219ENST00000556951 PAK3O75914 559 aaPredicted RBP18.69■□□□□ 0.58
PSEN1-219ENST00000556951 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
PSEN1-219ENST00000556951 NGDNQ8NEJ9 315 aaKnown RBP18.69■□□□□ 0.58
PSEN1-219ENST00000556951 C11orf95C9JLR9 678 aaPredicted RBP18.68■□□□□ 0.58
PSEN1-219ENST00000556951 PROM2Q8N271 834 aa18.68■□□□□ 0.58
PSEN1-219ENST00000556951 STRN4Q9NRL3 753 aa18.68■□□□□ 0.58
PSEN1-219ENST00000556951 TULP4Q9NRJ4 1543 aa18.68■□□□□ 0.58
PSEN1-219ENST00000556951 ZC3H6P61129 1189 aaKnown RBP18.67■□□□□ 0.58
PSEN1-219ENST00000556951 STK32BQ9NY57 414 aa18.67■□□□□ 0.58
PSEN1-219ENST00000556951 PEAK1Q9H792 1746 aa18.66■□□□□ 0.58
PSEN1-219ENST00000556951 SLC15A2Q16348 729 aa18.66■□□□□ 0.58
PSEN1-219ENST00000556951 USP35Q9P2H5 1018 aa18.65■□□□□ 0.58
PSEN1-219ENST00000556951 EIF3AQ14152 1382 aaKnown RBP18.65■□□□□ 0.58
PSEN1-219ENST00000556951 NUTM2GQ5VZR2 741 aa18.64■□□□□ 0.57
PSEN1-219ENST00000556951 GRIN3BO60391 1043 aa18.63■□□□□ 0.57
PSEN1-219ENST00000556951 LARP1Q6PKG0 1096 aaKnown RBP18.63■□□□□ 0.57
PSEN1-219ENST00000556951 NUDT16Q96DE0 195 aaKnown RBP18.63■□□□□ 0.57
PSEN1-219ENST00000556951 PARP4Q9UKK3 1724 aaKnown RBP18.63■□□□□ 0.57
PSEN1-219ENST00000556951 SSH2Q76I76 1423 aa18.62■□□□□ 0.57
PSEN1-219ENST00000556951 ATP7BP35670 1465 aa18.6■□□□□ 0.57
PSEN1-219ENST00000556951 OVOS2A0A0G2JMS6 1433 aa18.6■□□□□ 0.57
PSEN1-219ENST00000556951 OVOS2A0A0J9YW53 1432 aa18.6■□□□□ 0.57
PSEN1-219ENST00000556951 PCNTO95613 3336 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms