RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 MINK1Q8N4C8 1332 aaPredicted RBP13.38□□□□□ -0.27
HNRNPC-227ENST00000556897 PRR36Q9H6K5 1346 aa13.38□□□□□ -0.27
HNRNPC-227ENST00000556897 SPATA31A5Q5VU36 1347 aa13.37□□□□□ -0.27
HNRNPC-227ENST00000556897 SPATA31A7Q8IWB4 1347 aa13.37□□□□□ -0.27
HNRNPC-227ENST00000556897 ACIN1Q9UKV3 1341 aaKnown RBP13.37□□□□□ -0.27
HNRNPC-227ENST00000556897 ADGRB1O14514 1584 aa13.37□□□□□ -0.27
HNRNPC-227ENST00000556897 COL14A1Q05707 1796 aaKnown RBP13.36□□□□□ -0.27
HNRNPC-227ENST00000556897 ALS2Q96Q42 1657 aa13.36□□□□□ -0.27
HNRNPC-227ENST00000556897 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
HNRNPC-227ENST00000556897 PRDM11Q9NQV5 511 aa13.35□□□□□ -0.27
HNRNPC-227ENST00000556897 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-227ENST00000556897 WASLO00401 505 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-227ENST00000556897 R3HDM1Q15032 1099 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-227ENST00000556897 NGDNQ8NEJ9 315 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-227ENST00000556897 TULP4Q9NRJ4 1543 aa13.34□□□□□ -0.27
HNRNPC-227ENST00000556897 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.27
HNRNPC-227ENST00000556897 DISP2A7MBM2 1401 aa13.32□□□□□ -0.28
HNRNPC-227ENST00000556897 THSD7AQ9UPZ6 1657 aa13.32□□□□□ -0.28
HNRNPC-227ENST00000556897 KDM2AQ9Y2K7 1162 aa13.32□□□□□ -0.28
HNRNPC-227ENST00000556897 CRYBG1Q9Y4K1 1723 aa13.31□□□□□ -0.28
HNRNPC-227ENST00000556897 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
HNRNPC-227ENST00000556897 EZH2Q15910 746 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-227ENST00000556897 STRN4Q9NRL3 753 aa13.31□□□□□ -0.28
HNRNPC-227ENST00000556897 SPATA31A1Q5TZJ5 1347 aa13.31□□□□□ -0.28
HNRNPC-227ENST00000556897 KIAA0232Q92628 1395 aa13.31□□□□□ -0.28
HNRNPC-227ENST00000556897 TRIM37O94972 964 aa13.3□□□□□ -0.28
HNRNPC-227ENST00000556897 DCAF11Q8TEB1 546 aa13.3□□□□□ -0.28
HNRNPC-227ENST00000556897 TNS1Q9HBL0 1735 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-227ENST00000556897 FAM196AQ6ZSG2 479 aa13.29□□□□□ -0.28
HNRNPC-227ENST00000556897 CAMKK2Q96RR4 588 aa13.29□□□□□ -0.28
HNRNPC-227ENST00000556897 USP35Q9P2H5 1018 aa13.29□□□□□ -0.28
HNRNPC-227ENST00000556897 RAB3GAP2Q9H2M9 1393 aa13.29□□□□□ -0.28
HNRNPC-227ENST00000556897 ZC3H6P61129 1189 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-227ENST00000556897 NUTM2GQ5VZR2 741 aa13.28□□□□□ -0.28
HNRNPC-227ENST00000556897 NUDT16Q96DE0 195 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-227ENST00000556897 ATP7BP35670 1465 aa13.28□□□□□ -0.28
HNRNPC-227ENST00000556897 APBA3O96018 575 aa13.27□□□□□ -0.29
HNRNPC-227ENST00000556897 PHRF1Q9P1Y6 1649 aaKnown RBP13.25□□□□□ -0.29
HNRNPC-227ENST00000556897 EVA1CP58658 441 aa13.25□□□□□ -0.29
HNRNPC-227ENST00000556897 ITSN1Q15811 1721 aa13.25□□□□□ -0.29
HNRNPC-227ENST00000556897 ARHGEF28Q8N1W1 1705 aaKnown RBP13.25□□□□□ -0.29
HNRNPC-227ENST00000556897 SSH2Q76I76 1423 aa13.24□□□□□ -0.29
HNRNPC-227ENST00000556897 PARD3Q8TEW0 1356 aa13.24□□□□□ -0.29
HNRNPC-227ENST00000556897 PDE3BQ13370 1112 aa13.24□□□□□ -0.29
HNRNPC-227ENST00000556897 BARGINQ6ZT62 677 aa13.24□□□□□ -0.29
HNRNPC-227ENST00000556897 CDK19Q9BWU1 502 aa13.24□□□□□ -0.29
HNRNPC-227ENST00000556897 ACEP12821 1306 aa13.23□□□□□ -0.29
HNRNPC-227ENST00000556897 NBPF8Q3BBV2 869 aa13.23□□□□□ -0.29
HNRNPC-227ENST00000556897 LARP1Q6PKG0 1096 aaKnown RBP13.23□□□□□ -0.29
HNRNPC-227ENST00000556897 STAC3Q96MF2 364 aa13.23□□□□□ -0.29
HNRNPC-227ENST00000556897 POLR3AO14802 1390 aaPredicted RBP13.22□□□□□ -0.29
HNRNPC-227ENST00000556897 CAMTA1Q9Y6Y1 1673 aa13.22□□□□□ -0.29
HNRNPC-227ENST00000556897 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
HNRNPC-227ENST00000556897 ABTB2Q8N961 1025 aa13.22□□□□□ -0.29
HNRNPC-227ENST00000556897 CCDC61Q9Y6R9 512 aa13.22□□□□□ -0.29
HNRNPC-227ENST00000556897 NRKQ7Z2Y5 1582 aa13.2□□□□□ -0.3
HNRNPC-227ENST00000556897 PLEKHG3A1L390 1219 aa13.2□□□□□ -0.3
HNRNPC-227ENST00000556897 NBPF14Q5TI25 921 aa13.2□□□□□ -0.3
HNRNPC-227ENST00000556897 CPDO75976 1380 aa13.2□□□□□ -0.3
HNRNPC-227ENST00000556897 TOPAZ1Q8N9V7 1692 aa13.19□□□□□ -0.3
HNRNPC-227ENST00000556897 RREB1Q92766 1687 aa13.19□□□□□ -0.3
HNRNPC-227ENST00000556897 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
HNRNPC-227ENST00000556897 USP19O94966 1318 aa13.18□□□□□ -0.3
HNRNPC-227ENST00000556897 LMO7Q8WWI1 1683 aa13.18□□□□□ -0.3
HNRNPC-227ENST00000556897 GCP02774 474 aa13.17□□□□□ -0.3
HNRNPC-227ENST00000556897 YY1P25490 414 aa13.17□□□□□ -0.3
HNRNPC-227ENST00000556897 NLRP13Q86W25 1043 aa13.17□□□□□ -0.3
HNRNPC-227ENST00000556897 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
HNRNPC-227ENST00000556897 COL5A2P05997 1499 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-227ENST00000556897 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
HNRNPC-227ENST00000556897 ZBTB7CA1YPR0 619 aa13.15□□□□□ -0.3
HNRNPC-227ENST00000556897 SRPK2P78362 688 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-227ENST00000556897 NBPF1Q3BBV0 1214 aa13.15□□□□□ -0.3
HNRNPC-227ENST00000556897 SPON1Q9HCB6 807 aa13.15□□□□□ -0.3
HNRNPC-227ENST00000556897 PPP1R1BQ9UD71 204 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-227ENST00000556897 CABP2Q9NPB3 220 aa13.14□□□□□ -0.31
HNRNPC-227ENST00000556897 CRB1P82279 1406 aa13.13□□□□□ -0.31
HNRNPC-227ENST00000556897 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
HNRNPC-227ENST00000556897 KCNQ2O43526 872 aa13.13□□□□□ -0.31
HNRNPC-227ENST00000556897 OVOS2A0A0G2JMS6 1433 aa13.13□□□□□ -0.31
HNRNPC-227ENST00000556897 OVOS2A0A0J9YW53 1432 aa13.13□□□□□ -0.31
HNRNPC-227ENST00000556897 OVOS2Q6IE36 1432 aa13.13□□□□□ -0.31
HNRNPC-227ENST00000556897 C11orf95C9JLR9 678 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-227ENST00000556897 PEAK1Q9H792 1746 aa13.11□□□□□ -0.31
HNRNPC-227ENST00000556897 KIAA1210Q9ULL0 1709 aa13.11□□□□□ -0.31
HNRNPC-227ENST00000556897 NLRP6P59044 892 aa13.11□□□□□ -0.31
HNRNPC-227ENST00000556897 DDB1Q16531 1140 aa13.11□□□□□ -0.31
HNRNPC-227ENST00000556897 PTF1AQ7RTS3 328 aa13.11□□□□□ -0.31
HNRNPC-227ENST00000556897 CENPJQ9HC77 1338 aaPredicted RBP13.11□□□□□ -0.31
HNRNPC-227ENST00000556897 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
HNRNPC-227ENST00000556897 AATKQ6ZMQ8 1374 aa13.1□□□□□ -0.31
HNRNPC-227ENST00000556897 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
HNRNPC-227ENST00000556897 PLSCR1O15162 318 aa13.1□□□□□ -0.31
HNRNPC-227ENST00000556897 TOM1L2Q6ZVM7 507 aa13.1□□□□□ -0.31
HNRNPC-227ENST00000556897 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-227ENST00000556897 CABP1Q9NZU7 370 aa13.1□□□□□ -0.31
HNRNPC-227ENST00000556897 USP6P35125 1406 aa13.1□□□□□ -0.31
HNRNPC-227ENST00000556897 UTRNP46939 3433 aa13.1□□□□□ -0.31
HNRNPC-227ENST00000556897 BRD4O60885 1362 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-227ENST00000556897 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms