RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 HTRA3P83110 453 aa6.81□□□□□ -1.32
ATXN3-242ENST00000556644 ZNF326Q5BKZ1 582 aaKnown RBP6.81□□□□□ -1.32
ATXN3-242ENST00000556644 SGIP1Q9BQI5 828 aa6.81□□□□□ -1.32
ATXN3-242ENST00000556644 USP35Q9P2H5 1018 aa6.81□□□□□ -1.32
ATXN3-242ENST00000556644 CCDC144AA2RUR9 1427 aa6.81□□□□□ -1.32
ATXN3-242ENST00000556644 ABCC5O15440 1437 aa6.81□□□□□ -1.32
ATXN3-242ENST00000556644 CROCC2H7BZ55 1655 aa6.81□□□□□ -1.32
ATXN3-242ENST00000556644 TECPR2O15040 1411 aa6.8□□□□□ -1.32
ATXN3-242ENST00000556644 YBX3P16989 372 aaKnown RBP eCLIP6.8□□□□□ -1.32
ATXN3-242ENST00000556644 PDE3BQ13370 1112 aa6.8□□□□□ -1.32
ATXN3-242ENST00000556644 MYOM3Q5VTT5 1437 aa6.8□□□□□ -1.32
ATXN3-242ENST00000556644 CDC42BPGQ6DT37 1551 aa6.8□□□□□ -1.32
ATXN3-242ENST00000556644 MTFR1LQ9H019 292 aa6.8□□□□□ -1.32
ATXN3-242ENST00000556644 SPATA31A1Q5TZJ5 1347 aa6.79□□□□□ -1.32
ATXN3-242ENST00000556644 PTF1AQ7RTS3 328 aa6.79□□□□□ -1.32
ATXN3-242ENST00000556644 NLGN2Q8NFZ4 835 aa6.79□□□□□ -1.32
ATXN3-242ENST00000556644 STRN4Q9NRL3 753 aa6.79□□□□□ -1.32
ATXN3-242ENST00000556644 NAIPQ13075 1403 aa6.78□□□□□ -1.32
ATXN3-242ENST00000556644 COL14A1Q05707 1796 aaKnown RBP6.78□□□□□ -1.32
ATXN3-242ENST00000556644 STK32BQ9NY57 414 aa6.78□□□□□ -1.32
ATXN3-242ENST00000556644 MAP3K5Q99683 1374 aa6.78□□□□□ -1.32
ATXN3-242ENST00000556644 HFM1A2PYH4 1435 aa6.77□□□□□ -1.33
ATXN3-242ENST00000556644 RRBP1Q9P2E9 1410 aaKnown RBP6.77□□□□□ -1.33
ATXN3-242ENST00000556644 E9PCH4 1651 aa6.77□□□□□ -1.33
ATXN3-242ENST00000556644 DAPK1P53355 1430 aa6.76□□□□□ -1.33
ATXN3-242ENST00000556644 TNS2Q63HR2 1409 aa6.76□□□□□ -1.33
ATXN3-242ENST00000556644 IQGAP3Q86VI3 1631 aa6.76□□□□□ -1.33
ATXN3-242ENST00000556644 KIF3CO14782 793 aa6.76□□□□□ -1.33
ATXN3-242ENST00000556644 CHRNA2Q15822 529 aa6.76□□□□□ -1.33
ATXN3-242ENST00000556644 FAM161AQ3B820 660 aa6.76□□□□□ -1.33
ATXN3-242ENST00000556644 PROM2Q8N271 834 aa6.76□□□□□ -1.33
ATXN3-242ENST00000556644 KLRG1Q96E93 195 aa6.76□□□□□ -1.33
ATXN3-242ENST00000556644 PRDM11Q9NQV5 511 aa6.76□□□□□ -1.33
ATXN3-242ENST00000556644 ARHGEF10O15013 1369 aa6.76□□□□□ -1.33
ATXN3-242ENST00000556644 ANKRD30AQ9BXX3 1397 aa6.76□□□□□ -1.33
ATXN3-242ENST00000556644 KIF1AQ12756 1690 aa6.76□□□□□ -1.33
ATXN3-242ENST00000556644 ADCY9O60503 1353 aa6.75□□□□□ -1.33
ATXN3-242ENST00000556644 PSME1Q06323 249 aa6.75□□□□□ -1.33
ATXN3-242ENST00000556644 SLC15A2Q16348 729 aa6.75□□□□□ -1.33
ATXN3-242ENST00000556644 GOLGB1Q14789 3259 aaKnown RBP6.75□□□□□ -1.33
ATXN3-242ENST00000556644 SBNO1A3KN83 1393 aa6.74□□□□□ -1.33
ATXN3-242ENST00000556644 WDR90Q96KV7 1748 aa6.74□□□□□ -1.33
ATXN3-242ENST00000556644 WAPLQ7Z5K2 1190 aa6.74□□□□□ -1.33
ATXN3-242ENST00000556644 JMYQ8N9B5 988 aa6.74□□□□□ -1.33
ATXN3-242ENST00000556644 PHF8Q9UPP1 1060 aa6.74□□□□□ -1.33
ATXN3-242ENST00000556644 RGPD3A6NKT7 1758 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-242ENST00000556644 RGPD4Q7Z3J3 1758 aa6.74□□□□□ -1.33
ATXN3-242ENST00000556644 PLEKHH1Q9ULM0 1364 aa6.73□□□□□ -1.33
ATXN3-242ENST00000556644 PLSCR1O15162 318 aa6.73□□□□□ -1.33
ATXN3-242ENST00000556644 GRIN3BO60391 1043 aa6.73□□□□□ -1.33
ATXN3-242ENST00000556644 HSPA1AP0DMV8 641 aaKnown RBP6.73□□□□□ -1.33
ATXN3-242ENST00000556644 HSPA1BP0DMV9 641 aaKnown RBP6.73□□□□□ -1.33
ATXN3-242ENST00000556644 STK26Q9P289 416 aa6.73□□□□□ -1.33
ATXN3-242ENST00000556644 FMN2Q9NZ56 1722 aa6.73□□□□□ -1.33
ATXN3-242ENST00000556644 TXNRD1Q16881 649 aa6.72□□□□□ -1.33
ATXN3-242ENST00000556644 PRAG1Q86YV5 1406 aa6.72□□□□□ -1.33
ATXN3-242ENST00000556644 AATKQ6ZMQ8 1374 aa6.71□□□□□ -1.33
ATXN3-242ENST00000556644 KIAA0232Q92628 1395 aa6.71□□□□□ -1.33
ATXN3-242ENST00000556644 OVOS2A0A0G2JMS6 1433 aa6.71□□□□□ -1.34
ATXN3-242ENST00000556644 OVOS2A0A0J9YW53 1432 aa6.71□□□□□ -1.34
ATXN3-242ENST00000556644 OVOS2Q6IE36 1432 aa6.71□□□□□ -1.34
ATXN3-242ENST00000556644 ANKRD50Q9ULJ7 1429 aa6.71□□□□□ -1.34
ATXN3-242ENST00000556644 BARGINQ6ZT62 677 aa6.71□□□□□ -1.34
ATXN3-242ENST00000556644 PMFBP1Q8TBY8 1022 aa6.71□□□□□ -1.34
ATXN3-242ENST00000556644 PEAK1Q9H792 1746 aa6.7□□□□□ -1.34
ATXN3-242ENST00000556644 RGPD8O14715 1765 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-242ENST00000556644 SSH2Q76I76 1423 aa6.7□□□□□ -1.34
ATXN3-242ENST00000556644 POLD1P28340 1107 aa6.7□□□□□ -1.34
ATXN3-242ENST00000556644 HOXD11P31277 338 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-242ENST00000556644 KANK4Q5T7N3 995 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-242ENST00000556644 LARP1Q6PKG0 1096 aaKnown RBP6.7□□□□□ -1.34
ATXN3-242ENST00000556644 TCP11L2Q8N4U5 519 aa6.7□□□□□ -1.34
ATXN3-242ENST00000556644 NRXN1Q9ULB1 1477 aa6.7□□□□□ -1.34
ATXN3-242ENST00000556644 TOPAZ1Q8N9V7 1692 aa6.69□□□□□ -1.34
ATXN3-242ENST00000556644 TOMM70O94826 608 aa6.69□□□□□ -1.34
ATXN3-242ENST00000556644 EVA1CP58658 441 aa6.69□□□□□ -1.34
ATXN3-242ENST00000556644 ZC3H6P61129 1189 aaKnown RBP6.69□□□□□ -1.34
ATXN3-242ENST00000556644 ZNF827Q17R98 1081 aa6.69□□□□□ -1.34
ATXN3-242ENST00000556644 SBF2Q86WG5 1849 aa6.69□□□□□ -1.34
ATXN3-242ENST00000556644 TRPM3Q9HCF6 1732 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-242ENST00000556644 NMRK2Q9NPI5 230 aa6.68□□□□□ -1.34
ATXN3-242ENST00000556644 DHX57Q6P158 1386 aaKnown RBP6.68□□□□□ -1.34
ATXN3-242ENST00000556644 ALS2Q96Q42 1657 aa6.68□□□□□ -1.34
ATXN3-242ENST00000556644 CRYBG1Q9Y4K1 1723 aa6.67□□□□□ -1.34
ATXN3-242ENST00000556644 PAK3O75914 559 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-242ENST00000556644 PARP4Q9UKK3 1724 aaKnown RBP6.67□□□□□ -1.34
ATXN3-242ENST00000556644 ATP7BP35670 1465 aa6.66□□□□□ -1.34
ATXN3-242ENST00000556644 LRRC37A3O60309 1634 aa6.66□□□□□ -1.34
ATXN3-242ENST00000556644 CLTCL1P53675 1640 aa6.66□□□□□ -1.34
ATXN3-242ENST00000556644 NUTM2GQ5VZR2 741 aa6.66□□□□□ -1.34
ATXN3-242ENST00000556644 IFT172Q9UG01 1749 aa6.66□□□□□ -1.34
ATXN3-242ENST00000556644 PAPPAQ13219 1627 aa6.65□□□□□ -1.34
ATXN3-242ENST00000556644 SAFB2Q14151 953 aaKnown RBP eCLIP6.65□□□□□ -1.34
ATXN3-242ENST00000556644 MARCH10Q8NA82 808 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-242ENST00000556644 PCNTO95613 3336 aa6.65□□□□□ -1.35
ATXN3-242ENST00000556644 PHRF1Q9P1Y6 1649 aaKnown RBP6.65□□□□□ -1.35
ATXN3-242ENST00000556644 C11orf95C9JLR9 678 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-242ENST00000556644 VGFO15240 615 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-242ENST00000556644 MLLT1Q03111 559 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-242ENST00000556644 DDB1Q16531 1140 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms