RNA–Protein interactions for RNA: ENST00000556547.5

CASC1-212, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 820 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-212ENST00000556547 GPSM3Q9Y4H4 160 aa8.57□□□□□ -1.04
CASC1-212ENST00000556547 ADH1BP00325 375 aa8.56□□□□□ -1.04
CASC1-212ENST00000556547 CTHP32929 405 aa8.56□□□□□ -1.04
CASC1-212ENST00000556547 MMP16P51512 607 aa8.56□□□□□ -1.04
CASC1-212ENST00000556547 NUDT12Q9BQG2 462 aa8.56□□□□□ -1.04
CASC1-212ENST00000556547 TRAIPQ9BWF2 469 aa8.56□□□□□ -1.04
CASC1-212ENST00000556547 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
CASC1-212ENST00000556547 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
CASC1-212ENST00000556547 ZBTB7CA1YPR0 619 aa8.55□□□□□ -1.04
CASC1-212ENST00000556547 MCCD1P59942 119 aaPredicted RBP8.55□□□□□ -1.04
CASC1-212ENST00000556547 COPS2P61201 443 aa8.55□□□□□ -1.04
CASC1-212ENST00000556547 KCTD12Q96CX2 325 aaKnown RBP8.55□□□□□ -1.04
CASC1-212ENST00000556547 PPP1R12CQ9BZL4 782 aa8.55□□□□□ -1.04
CASC1-212ENST00000556547 KCTD17Q8N5Z5 321 aa8.54□□□□□ -1.04
CASC1-212ENST00000556547 EVA1BQ9NVM1 165 aa8.54□□□□□ -1.04
CASC1-212ENST00000556547 MAP10Q9P2G4 905 aa8.54□□□□□ -1.04
CASC1-212ENST00000556547 ZPR1O75312 459 aa8.53□□□□□ -1.04
CASC1-212ENST00000556547 FBXO45P0C2W1 286 aa8.53□□□□□ -1.04
CASC1-212ENST00000556547 PTK2Q05397 1052 aa8.53□□□□□ -1.04
CASC1-212ENST00000556547 KCNH2Q12809 1159 aa8.53□□□□□ -1.04
CASC1-212ENST00000556547 PALM3A6NDB9 673 aaPredicted RBP8.52□□□□□ -1.05
CASC1-212ENST00000556547 CFAP70Q5T0N1 1121 aa8.52□□□□□ -1.05
CASC1-212ENST00000556547 PDXDC2PQ6P474 469 aa8.52□□□□□ -1.05
CASC1-212ENST00000556547 FAM160A2Q8N612 972 aaPredicted RBP8.52□□□□□ -1.05
CASC1-212ENST00000556547 RETREG2Q8NC44 543 aa8.52□□□□□ -1.05
CASC1-212ENST00000556547 NFATC2IPQ8NCF5 419 aa8.52□□□□□ -1.05
CASC1-212ENST00000556547 IL21Q9HBE4 155 aa8.52□□□□□ -1.05
CASC1-212ENST00000556547 MTRQ99707 1265 aa8.51□□□□□ -1.05
CASC1-212ENST00000556547 PODXL2Q9NZ53 605 aa8.51□□□□□ -1.05
CASC1-212ENST00000556547 MYT1LQ9UL68 1186 aa8.51□□□□□ -1.05
CASC1-212ENST00000556547 USTQ9Y2C2 406 aa8.51□□□□□ -1.05
CASC1-212ENST00000556547 UCN2Q96RP3 112 aa8.5□□□□□ -1.05
CASC1-212ENST00000556547 PATL2C9JE40 543 aaKnown RBP8.49□□□□□ -1.05
CASC1-212ENST00000556547 ATP9BO43861 1147 aa8.49□□□□□ -1.05
CASC1-212ENST00000556547 CSB-PGBD3P0DP91 1061 aa8.49□□□□□ -1.05
CASC1-212ENST00000556547 SLC6A16Q9GZN6 736 aa8.49□□□□□ -1.05
CASC1-212ENST00000556547 TFIP11Q9UBB9 837 aaKnown RBP8.49□□□□□ -1.05
CASC1-212ENST00000556547 TLL1O43897 1013 aa8.48□□□□□ -1.05
CASC1-212ENST00000556547 RFX1P22670 979 aa8.48□□□□□ -1.05
CASC1-212ENST00000556547 LMOD1P29536 600 aaPredicted RBP8.48□□□□□ -1.05
CASC1-212ENST00000556547 TRIM26Q12899 539 aaPredicted RBP8.48□□□□□ -1.05
CASC1-212ENST00000556547 PRDM9Q9NQV7 894 aa8.48□□□□□ -1.05
CASC1-212ENST00000556547 MAFBQ9Y5Q3 323 aaPredicted RBP8.48□□□□□ -1.05
CASC1-212ENST00000556547 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.47□□□□□ -1.05
CASC1-212ENST00000556547 TJAP1Q5JTD0 557 aa8.46□□□□□ -1.06
CASC1-212ENST00000556547 UNC93B1Q9H1C4 597 aa8.46□□□□□ -1.06
CASC1-212ENST00000556547 PTPN5P54829 565 aa8.45□□□□□ -1.06
CASC1-212ENST00000556547 CCDC24Q8N4L8 307 aa8.45□□□□□ -1.06
CASC1-212ENST00000556547 ARHGAP9Q9BRR9 750 aa8.45□□□□□ -1.06
CASC1-212ENST00000556547 LZTS3O60299 673 aaPredicted RBP8.44□□□□□ -1.06
CASC1-212ENST00000556547 ATG7O95352 703 aa8.44□□□□□ -1.06
CASC1-212ENST00000556547 SRPK2P78362 688 aaKnown RBP8.44□□□□□ -1.06
CASC1-212ENST00000556547 SLFNL1Q499Z3 407 aa8.44□□□□□ -1.06
CASC1-212ENST00000556547 TBC1D9Q6ZT07 1266 aa8.44□□□□□ -1.06
CASC1-212ENST00000556547 PLEKHM2Q8IWE5 1019 aa8.44□□□□□ -1.06
CASC1-212ENST00000556547 PCDHB9Q9Y5E1 797 aa8.44□□□□□ -1.06
CASC1-212ENST00000556547 ZBTB33Q86T24 672 aa8.43□□□□□ -1.06
CASC1-212ENST00000556547 MMRN1Q13201 1228 aa8.42□□□□□ -1.06
CASC1-212ENST00000556547 SH3BP5LQ7L8J4 393 aa8.42□□□□□ -1.06
CASC1-212ENST00000556547 BPHLQ86WA6 291 aaPredicted RBP8.42□□□□□ -1.06
CASC1-212ENST00000556547 ADAM32Q8TC27 787 aa8.42□□□□□ -1.06
CASC1-212ENST00000556547 VRTNQ9H8Y1 702 aa8.42□□□□□ -1.06
CASC1-212ENST00000556547 USP17L3A6NCW0 530 aa8.41□□□□□ -1.06
CASC1-212ENST00000556547 USP17L4A6NCW7 530 aa8.41□□□□□ -1.06
CASC1-212ENST00000556547 USP17L5A8MUK1 530 aa8.41□□□□□ -1.06
CASC1-212ENST00000556547 SKIP12755 728 aa8.41□□□□□ -1.06
CASC1-212ENST00000556547 MAP7D1Q3KQU3 841 aa8.41□□□□□ -1.06
CASC1-212ENST00000556547 B4GALNT3Q6L9W6 998 aa8.41□□□□□ -1.06
CASC1-212ENST00000556547 USP17L2Q6R6M4 530 aa8.41□□□□□ -1.06
CASC1-212ENST00000556547 USP17L1Q7RTZ2 530 aa8.41□□□□□ -1.06
CASC1-212ENST00000556547 RNF135Q8IUD6 432 aa8.41□□□□□ -1.06
CASC1-212ENST00000556547 CEP126Q9P2H0 1117 aa8.41□□□□□ -1.06
CASC1-212ENST00000556547 BRD1O95696 1058 aa8.4□□□□□ -1.06
CASC1-212ENST00000556547 ELOAQ14241 798 aaKnown RBP8.4□□□□□ -1.06
CASC1-212ENST00000556547 DZIP3Q86Y13 1208 aaKnown RBP8.4□□□□□ -1.06
CASC1-212ENST00000556547 CCDC125Q86Z20 511 aa8.4□□□□□ -1.06
CASC1-212ENST00000556547 SPNS2Q8IVW8 549 aa8.4□□□□□ -1.06
CASC1-212ENST00000556547 CDV3Q9UKY7 258 aaKnown RBP8.4□□□□□ -1.06
CASC1-212ENST00000556547 S1PR4O95977 384 aa8.39□□□□□ -1.07
CASC1-212ENST00000556547 GGCXP38435 758 aa8.39□□□□□ -1.07
CASC1-212ENST00000556547 KCNA1Q09470 495 aa8.39□□□□□ -1.07
CASC1-212ENST00000556547 AGERQ15109 404 aa8.39□□□□□ -1.07
CASC1-212ENST00000556547 AEBP1Q8IUX7 1158 aa8.39□□□□□ -1.07
CASC1-212ENST00000556547 ZNF516Q92618 1163 aa8.39□□□□□ -1.07
CASC1-212ENST00000556547 FCF1Q9Y324 198 aaKnown RBP8.39□□□□□ -1.07
CASC1-212ENST00000556547 CCDC9Q9Y3X0 531 aaKnown RBP8.39□□□□□ -1.07
CASC1-212ENST00000556547 ATP5J2-PTCD1G3V325 749 aa8.38□□□□□ -1.07
CASC1-212ENST00000556547 PIK3CDO00329 1044 aa8.38□□□□□ -1.07
CASC1-212ENST00000556547 NBPF20Q3BBV1 942 aa8.38□□□□□ -1.07
CASC1-212ENST00000556547 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
CASC1-212ENST00000556547 SH3RF1Q7Z6J0 888 aa8.38□□□□□ -1.07
CASC1-212ENST00000556547 ZNF511Q8NB15 262 aa8.38□□□□□ -1.07
CASC1-212ENST00000556547 SLC10A4Q96EP9 437 aa8.38□□□□□ -1.07
CASC1-212ENST00000556547 OCSTAMPQ9BR26 566 aa8.38□□□□□ -1.07
CASC1-212ENST00000556547 HCSTQ9UBK5 93 aa8.38□□□□□ -1.07
CASC1-212ENST00000556547 MAGEB6P1A0A0J9YX57 407 aa8.37□□□□□ -1.07
CASC1-212ENST00000556547 FAM196BA6NMK8 535 aa8.37□□□□□ -1.07
CASC1-212ENST00000556547 EML3Q32P44 896 aa8.37□□□□□ -1.07
CASC1-212ENST00000556547 KANK4Q5T7N3 995 aaPredicted RBP8.37□□□□□ -1.07
CASC1-212ENST00000556547 PLPP7Q8NBV4 271 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms