RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 PANK3Q9H999 370 aa15.51■□□□□ 0.07
FOXN3-212ENST00000556541 SOS2Q07890 1332 aaPredicted RBP15.5■□□□□ 0.07
FOXN3-212ENST00000556541 UBAP1LF5GYI3 381 aa15.49■□□□□ 0.07
FOXN3-212ENST00000556541 COL16A1Q07092 1604 aaPredicted RBP15.49■□□□□ 0.07
FOXN3-212ENST00000556541 NSD3Q9BZ95 1437 aa15.49■□□□□ 0.07
FOXN3-212ENST00000556541 MED1Q15648 1581 aaPredicted RBP15.49■□□□□ 0.07
FOXN3-212ENST00000556541 PIK3C2AO00443 1686 aa15.48■□□□□ 0.07
FOXN3-212ENST00000556541 PSME1Q06323 249 aa15.48■□□□□ 0.07
FOXN3-212ENST00000556541 PMFBP1Q8TBY8 1022 aa15.48■□□□□ 0.07
FOXN3-212ENST00000556541 POLR3GLQ9BT43 218 aa15.48■□□□□ 0.07
FOXN3-212ENST00000556541 CARD14Q9BXL6 1004 aa15.48■□□□□ 0.07
FOXN3-212ENST00000556541 PHLPP1O60346 1717 aa15.48■□□□□ 0.07
FOXN3-212ENST00000556541 USP31Q70CQ4 1352 aa15.48■□□□□ 0.07
FOXN3-212ENST00000556541 COL22A1Q8NFW1 1626 aaPredicted RBP15.46■□□□□ 0.07
FOXN3-212ENST00000556541 CGNL1Q0VF96 1302 aa15.46■□□□□ 0.07
FOXN3-212ENST00000556541 TTC21BQ7Z4L5 1316 aa15.46■□□□□ 0.07
FOXN3-212ENST00000556541 MARF1Q9Y4F3 1742 aaKnown RBP15.46■□□□□ 0.07
FOXN3-212ENST00000556541 TNS3Q68CZ2 1445 aa15.46■□□□□ 0.07
FOXN3-212ENST00000556541 FOXO3O43524 673 aa15.46■□□□□ 0.07
FOXN3-212ENST00000556541 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
FOXN3-212ENST00000556541 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
FOXN3-212ENST00000556541 CRYBG1Q9Y4K1 1723 aa15.46■□□□□ 0.06
FOXN3-212ENST00000556541 KRT28Q7Z3Y7 464 aa15.45■□□□□ 0.06
FOXN3-212ENST00000556541 ARHGEF10O15013 1369 aa15.45■□□□□ 0.06
FOXN3-212ENST00000556541 OVOS2A0A0J9YW53 1432 aa15.44■□□□□ 0.06
FOXN3-212ENST00000556541 OVOS2Q6IE36 1432 aa15.44■□□□□ 0.06
FOXN3-212ENST00000556541 AMER1Q5JTC6 1135 aaPredicted RBP15.44■□□□□ 0.06
FOXN3-212ENST00000556541 SHPRHQ149N8 1683 aa15.44■□□□□ 0.06
FOXN3-212ENST00000556541 SPATA31A3Q5VYP0 1347 aa15.43■□□□□ 0.06
FOXN3-212ENST00000556541 SLIT3O75094 1523 aa15.43■□□□□ 0.06
FOXN3-212ENST00000556541 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
FOXN3-212ENST00000556541 FYB1O15117 783 aa15.41■□□□□ 0.06
FOXN3-212ENST00000556541 ABCA3Q99758 1704 aa15.4■□□□□ 0.06
FOXN3-212ENST00000556541 PHRF1Q9P1Y6 1649 aaKnown RBP15.4■□□□□ 0.06
FOXN3-212ENST00000556541 LRRC59Q96AG4 307 aaKnown RBP15.4■□□□□ 0.06
FOXN3-212ENST00000556541 USP19O94966 1318 aa15.4■□□□□ 0.06
FOXN3-212ENST00000556541 PARD3Q8TEW0 1356 aa15.39■□□□□ 0.05
FOXN3-212ENST00000556541 ABCC6O95255 1503 aa15.38■□□□□ 0.05
FOXN3-212ENST00000556541 AATKQ6ZMQ8 1374 aa15.37■□□□□ 0.05
FOXN3-212ENST00000556541 HSPA1LP34931 641 aa15.37■□□□□ 0.05
FOXN3-212ENST00000556541 PIP4K2BP78356 416 aa15.37■□□□□ 0.05
FOXN3-212ENST00000556541 RALBP1Q15311 655 aa15.37■□□□□ 0.05
FOXN3-212ENST00000556541 NLRP13Q86W25 1043 aa15.37■□□□□ 0.05
FOXN3-212ENST00000556541 NME9Q86XW9 330 aa15.36■□□□□ 0.05
FOXN3-212ENST00000556541 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
FOXN3-212ENST00000556541 NFAT5O94916 1531 aa15.36■□□□□ 0.05
FOXN3-212ENST00000556541 KIF24Q5T7B8 1368 aa15.36■□□□□ 0.05
FOXN3-212ENST00000556541 PNPLA6Q8IY17 1366 aa15.36■□□□□ 0.05
FOXN3-212ENST00000556541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.35■□□□□ 0.05
FOXN3-212ENST00000556541 DDX17Q92841 729 aaKnown RBP15.35■□□□□ 0.05
FOXN3-212ENST00000556541 COG3Q96JB2 828 aa15.35■□□□□ 0.05
FOXN3-212ENST00000556541 JCADQ9P266 1359 aa15.35■□□□□ 0.05
FOXN3-212ENST00000556541 SMG6Q86US8 1419 aaKnown RBP15.34■□□□□ 0.05
FOXN3-212ENST00000556541 MAP2P11137 1827 aaKnown RBP15.34■□□□□ 0.05
FOXN3-212ENST00000556541 PAK3O75914 559 aaPredicted RBP15.33■□□□□ 0.04
FOXN3-212ENST00000556541 NLRP6P59044 892 aa15.33■□□□□ 0.04
FOXN3-212ENST00000556541 XPCQ01831 940 aaPredicted RBP15.33■□□□□ 0.04
FOXN3-212ENST00000556541 DIEXFQ68CQ4 756 aaKnown RBP15.33■□□□□ 0.04
FOXN3-212ENST00000556541 KCNH5Q8NCM2 988 aa15.33■□□□□ 0.04
FOXN3-212ENST00000556541 PRKRIP1Q9H875 184 aaPredicted RBP15.33■□□□□ 0.04
FOXN3-212ENST00000556541 GGNBP2Q9H3C7 697 aa15.32■□□□□ 0.04
FOXN3-212ENST00000556541 CPDO75976 1380 aa15.32■□□□□ 0.04
FOXN3-212ENST00000556541 LTN1O94822 1766 aa15.31■□□□□ 0.04
FOXN3-212ENST00000556541 RTL1A6NKG5 1358 aa15.3■□□□□ 0.04
FOXN3-212ENST00000556541 SPATA31A6Q5VVP1 1343 aa15.3■□□□□ 0.04
FOXN3-212ENST00000556541 MORC1Q86VD1 984 aa15.3■□□□□ 0.04
FOXN3-212ENST00000556541 INSRP06213 1382 aa15.29■□□□□ 0.04
FOXN3-212ENST00000556541 ANP32CO43423 234 aa15.29■□□□□ 0.04
FOXN3-212ENST00000556541 CC2D1BQ5T0F9 858 aaKnown RBP15.29■□□□□ 0.04
FOXN3-212ENST00000556541 COL18A1P39060 1754 aa15.29■□□□□ 0.04
FOXN3-212ENST00000556541 CDK12Q9NYV4 1490 aaPredicted RBP15.28■□□□□ 0.04
FOXN3-212ENST00000556541 MYBBP1AQ9BQG0 1328 aaKnown RBP15.28■□□□□ 0.04
FOXN3-212ENST00000556541 GCP02774 474 aa15.28■□□□□ 0.04
FOXN3-212ENST00000556541 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.04
FOXN3-212ENST00000556541 LMO7Q8WWI1 1683 aa15.27■□□□□ 0.03
FOXN3-212ENST00000556541 COL14A1Q05707 1796 aaKnown RBP15.26■□□□□ 0.03
FOXN3-212ENST00000556541 PEAK1Q9H792 1746 aa15.26■□□□□ 0.03
FOXN3-212ENST00000556541 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
FOXN3-212ENST00000556541 LMOD2Q6P5Q4 547 aa15.25■□□□□ 0.03
FOXN3-212ENST00000556541 ARHGEF25Q86VW2 580 aa15.25■□□□□ 0.03
FOXN3-212ENST00000556541 FAM208AQ9UK61 1670 aaKnown RBP15.25■□□□□ 0.03
FOXN3-212ENST00000556541 BLMP54132 1417 aaPredicted RBP15.25■□□□□ 0.03
FOXN3-212ENST00000556541 PPP2R1AP30153 589 aa15.24■□□□□ 0.03
FOXN3-212ENST00000556541 FLT4P35916 1363 aa15.24■□□□□ 0.03
FOXN3-212ENST00000556541 NUTM2GQ5VZR2 741 aa15.23■□□□□ 0.03
FOXN3-212ENST00000556541 POLKQ9UBT6 870 aa15.23■□□□□ 0.03
FOXN3-212ENST00000556541 MAP3K19Q56UN5 1328 aa15.22■□□□□ 0.03
FOXN3-212ENST00000556541 COL3A1P02461 1466 aaPredicted RBP15.22■□□□□ 0.03
FOXN3-212ENST00000556541 CCER2I3L3R5 266 aa15.22■□□□□ 0.03
FOXN3-212ENST00000556541 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.21■□□□□ 0.03
FOXN3-212ENST00000556541 PLCH1Q4KWH8 1693 aa15.21■□□□□ 0.03
FOXN3-212ENST00000556541 CAMTA1Q9Y6Y1 1673 aa15.2■□□□□ 0.02
FOXN3-212ENST00000556541 IP6K1Q92551 441 aa15.2■□□□□ 0.02
FOXN3-212ENST00000556541 RGPD5Q99666 1765 aa15.2■□□□□ 0.02
FOXN3-212ENST00000556541 KIAA0232Q92628 1395 aa15.2■□□□□ 0.02
FOXN3-212ENST00000556541 NRAPQ86VF7 1730 aa15.2■□□□□ 0.02
FOXN3-212ENST00000556541 LRP6O75581 1613 aa15.19■□□□□ 0.02
FOXN3-212ENST00000556541 MTHFSP49914 203 aa15.19■□□□□ 0.02
FOXN3-212ENST00000556541 CABLES1Q8TDN4 633 aa15.19■□□□□ 0.02
FOXN3-212ENST00000556541 RGPD1P0DJD0 1748 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms