RNA–Protein interactions for RNA: ENST00000556490.5

TTC7B-209, Transcript of tetratricopeptide repeat domain 7B, humanhuman

TSL 3

Gene TTC7B, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7B-209ENST00000556490 GGNBP2Q9H3C7 697 aa13.3□□□□□ -0.28
TTC7B-209ENST00000556490 ZNF335Q9H4Z2 1342 aaPredicted RBP13.3□□□□□ -0.28
TTC7B-209ENST00000556490 MARF1Q9Y4F3 1742 aaKnown RBP13.3□□□□□ -0.28
TTC7B-209ENST00000556490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
TTC7B-209ENST00000556490 FAM9BQ8IZU0 186 aa13.29□□□□□ -0.28
TTC7B-209ENST00000556490 PNISRQ8TF01 805 aaKnown RBP13.29□□□□□ -0.28
TTC7B-209ENST00000556490 C19orf44Q9H6X5 657 aa13.29□□□□□ -0.28
TTC7B-209ENST00000556490 MST1RQ04912 1400 aa13.29□□□□□ -0.28
TTC7B-209ENST00000556490 C1orf167Q5SNV9 1468 aa13.29□□□□□ -0.28
TTC7B-209ENST00000556490 PMFBP1Q8TBY8 1022 aa13.28□□□□□ -0.28
TTC7B-209ENST00000556490 TTC21BQ7Z4L5 1316 aa13.28□□□□□ -0.28
TTC7B-209ENST00000556490 TRPM3Q9HCF6 1732 aaPredicted RBP13.27□□□□□ -0.28
TTC7B-209ENST00000556490 NME9Q86XW9 330 aa13.27□□□□□ -0.29
TTC7B-209ENST00000556490 NGDNQ8NEJ9 315 aaKnown RBP13.27□□□□□ -0.29
TTC7B-209ENST00000556490 PHF8Q9UPP1 1060 aa13.27□□□□□ -0.29
TTC7B-209ENST00000556490 MSH6P52701 1360 aa13.27□□□□□ -0.29
TTC7B-209ENST00000556490 OVOS2A0A0J9YW53 1432 aa13.27□□□□□ -0.29
TTC7B-209ENST00000556490 OVOS2Q6IE36 1432 aa13.27□□□□□ -0.29
TTC7B-209ENST00000556490 CENPBP07199 599 aaPredicted RBP13.26□□□□□ -0.29
TTC7B-209ENST00000556490 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
TTC7B-209ENST00000556490 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
TTC7B-209ENST00000556490 INSRP06213 1382 aa13.25□□□□□ -0.29
TTC7B-209ENST00000556490 SCAF1Q9H7N4 1312 aaKnown RBP13.25□□□□□ -0.29
TTC7B-209ENST00000556490 COL3A1P02461 1466 aaPredicted RBP13.24□□□□□ -0.29
TTC7B-209ENST00000556490 SMG6Q86US8 1419 aaKnown RBP13.24□□□□□ -0.29
TTC7B-209ENST00000556490 ATF3P18847 181 aa13.24□□□□□ -0.29
TTC7B-209ENST00000556490 ESCO1Q5FWF5 840 aa13.24□□□□□ -0.29
TTC7B-209ENST00000556490 BLMP54132 1417 aaPredicted RBP13.23□□□□□ -0.29
TTC7B-209ENST00000556490 MTHFSP49914 203 aa13.23□□□□□ -0.29
TTC7B-209ENST00000556490 CADPS2Q86UW7 1296 aa13.23□□□□□ -0.29
TTC7B-209ENST00000556490 COG3Q96JB2 828 aa13.23□□□□□ -0.29
TTC7B-209ENST00000556490 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
TTC7B-209ENST00000556490 LTBP4Q8N2S1 1624 aa13.23□□□□□ -0.29
TTC7B-209ENST00000556490 AATKQ6ZMQ8 1374 aa13.22□□□□□ -0.29
TTC7B-209ENST00000556490 USP31Q70CQ4 1352 aa13.22□□□□□ -0.29
TTC7B-209ENST00000556490 HNRNPUQ00839 825 aaKnown RBP eCLIP13.22□□□□□ -0.29
TTC7B-209ENST00000556490 ORAI2Q96SN7 254 aa13.22□□□□□ -0.29
TTC7B-209ENST00000556490 CDK12Q9NYV4 1490 aaPredicted RBP13.22□□□□□ -0.29
TTC7B-209ENST00000556490 ALS2Q96Q42 1657 aa13.21□□□□□ -0.29
TTC7B-209ENST00000556490 IQSEC2Q5JU85 1478 aa13.21□□□□□ -0.3
TTC7B-209ENST00000556490 PEAK1Q9H792 1746 aa13.2□□□□□ -0.3
TTC7B-209ENST00000556490 WDR43Q15061 677 aaKnown RBP eCLIP13.2□□□□□ -0.3
TTC7B-209ENST00000556490 CFAP53Q96M91 514 aa13.2□□□□□ -0.3
TTC7B-209ENST00000556490 LTN1O94822 1766 aa13.19□□□□□ -0.3
TTC7B-209ENST00000556490 PNPLA6Q8IY17 1366 aa13.19□□□□□ -0.3
TTC7B-209ENST00000556490 NHSL1Q5SYE7 1610 aa13.17□□□□□ -0.3
TTC7B-209ENST00000556490 ZBED9Q6R2W3 1325 aa13.17□□□□□ -0.3
TTC7B-209ENST00000556490 FOXO3O43524 673 aa13.17□□□□□ -0.3
TTC7B-209ENST00000556490 PSME1Q06323 249 aa13.17□□□□□ -0.3
TTC7B-209ENST00000556490 POLKQ9UBT6 870 aa13.17□□□□□ -0.3
TTC7B-209ENST00000556490 ADAMTS8Q9UP79 889 aa13.17□□□□□ -0.3
TTC7B-209ENST00000556490 PXDNQ92626 1479 aa13.16□□□□□ -0.3
TTC7B-209ENST00000556490 FBLN1P23142 703 aa13.16□□□□□ -0.3
TTC7B-209ENST00000556490 SLIT3O75094 1523 aa13.16□□□□□ -0.3
TTC7B-209ENST00000556490 NFAT5O94916 1531 aa13.16□□□□□ -0.3
TTC7B-209ENST00000556490 PHRF1Q9P1Y6 1649 aaKnown RBP13.16□□□□□ -0.3
TTC7B-209ENST00000556490 CRYBG1Q9Y4K1 1723 aa13.16□□□□□ -0.3
TTC7B-209ENST00000556490 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
TTC7B-209ENST00000556490 ABTB2Q8N961 1025 aa13.15□□□□□ -0.3
TTC7B-209ENST00000556490 EMILIN1Q9Y6C2 1016 aa13.15□□□□□ -0.3
TTC7B-209ENST00000556490 NLRP6P59044 892 aa13.14□□□□□ -0.31
TTC7B-209ENST00000556490 XPCQ01831 940 aaPredicted RBP13.14□□□□□ -0.31
TTC7B-209ENST00000556490 RRS1Q15050 365 aaKnown RBP13.14□□□□□ -0.31
TTC7B-209ENST00000556490 KRT28Q7Z3Y7 464 aa13.14□□□□□ -0.31
TTC7B-209ENST00000556490 SBNO1A3KN83 1393 aa13.14□□□□□ -0.31
TTC7B-209ENST00000556490 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
TTC7B-209ENST00000556490 RGPD1P0DJD0 1748 aa13.13□□□□□ -0.31
TTC7B-209ENST00000556490 BRINP3Q76B58 766 aa13.13□□□□□ -0.31
TTC7B-209ENST00000556490 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
TTC7B-209ENST00000556490 PPM1GO15355 546 aaPredicted RBP13.12□□□□□ -0.31
TTC7B-209ENST00000556490 DIAPH1O60610 1272 aaKnown RBP13.12□□□□□ -0.31
TTC7B-209ENST00000556490 NUTM2GQ5VZR2 741 aa13.12□□□□□ -0.31
TTC7B-209ENST00000556490 ILDR2Q71H61 639 aa13.12□□□□□ -0.31
TTC7B-209ENST00000556490 SLAIN2Q9P270 581 aa13.12□□□□□ -0.31
TTC7B-209ENST00000556490 TNS3Q68CZ2 1445 aa13.12□□□□□ -0.31
TTC7B-209ENST00000556490 NUDCQ9Y266 331 aa13.11□□□□□ -0.31
TTC7B-209ENST00000556490 ROBO1Q9Y6N7 1651 aa13.11□□□□□ -0.31
TTC7B-209ENST00000556490 USP19O94966 1318 aa13.11□□□□□ -0.31
TTC7B-209ENST00000556490 MAP3K19Q56UN5 1328 aa13.11□□□□□ -0.31
TTC7B-209ENST00000556490 ABCA3Q99758 1704 aa13.1□□□□□ -0.31
TTC7B-209ENST00000556490 FLT4P35916 1363 aa13.1□□□□□ -0.31
TTC7B-209ENST00000556490 KIF24Q5T7B8 1368 aa13.1□□□□□ -0.31
TTC7B-209ENST00000556490 SOX12O15370 315 aa13.1□□□□□ -0.31
TTC7B-209ENST00000556490 DDX17Q92841 729 aaKnown RBP13.1□□□□□ -0.31
TTC7B-209ENST00000556490 RTL1A6NKG5 1358 aa13.09□□□□□ -0.31
TTC7B-209ENST00000556490 UBAP1LF5GYI3 381 aa13.09□□□□□ -0.31
TTC7B-209ENST00000556490 U2AF1L5P0DN76 240 aaPredicted RBP13.09□□□□□ -0.31
TTC7B-209ENST00000556490 IL13P35225 146 aa13.09□□□□□ -0.31
TTC7B-209ENST00000556490 U2AF1Q01081 240 aaKnown RBP eCLIP13.09□□□□□ -0.31
TTC7B-209ENST00000556490 CCDC146Q8IYE0 955 aa13.09□□□□□ -0.31
TTC7B-209ENST00000556490 SENP3-EIF4A1A0A087X0R7 540 aa13.08□□□□□ -0.32
TTC7B-209ENST00000556490 AHDC1Q5TGY3 1603 aaPredicted RBP13.08□□□□□ -0.32
TTC7B-209ENST00000556490 ARHGEF10O15013 1369 aa13.07□□□□□ -0.32
TTC7B-209ENST00000556490 SOCS7O14512 581 aa13.07□□□□□ -0.32
TTC7B-209ENST00000556490 U2SURPO15042 1029 aaKnown RBP13.07□□□□□ -0.32
TTC7B-209ENST00000556490 KCNH5Q8NCM2 988 aa13.07□□□□□ -0.32
TTC7B-209ENST00000556490 SOS2Q07890 1332 aaPredicted RBP13.07□□□□□ -0.32
TTC7B-209ENST00000556490 SPATA31A3Q5VYP0 1347 aa13.07□□□□□ -0.32
TTC7B-209ENST00000556490 RGPD5Q99666 1765 aa13.07□□□□□ -0.32
TTC7B-209ENST00000556490 LMOD2Q6P5Q4 547 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms