RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 ANKRD26Q9UPS8 1709 aa14.53□□□□□ -0.08
LINC01550-206ENST00000556462 KIF20BQ96Q89 1820 aa14.53□□□□□ -0.08
LINC01550-206ENST00000556462 ESCO1Q5FWF5 840 aa14.53□□□□□ -0.08
LINC01550-206ENST00000556462 ADAMTS8Q9UP79 889 aa14.53□□□□□ -0.08
LINC01550-206ENST00000556462 DMRT2Q9Y5R5 561 aa14.53□□□□□ -0.08
LINC01550-206ENST00000556462 NRKQ7Z2Y5 1582 aa14.52□□□□□ -0.08
LINC01550-206ENST00000556462 ORAI2Q96SN7 254 aa14.52□□□□□ -0.09
LINC01550-206ENST00000556462 SCAF1Q9H7N4 1312 aaKnown RBP14.52□□□□□ -0.09
LINC01550-206ENST00000556462 FBLN1P23142 703 aa14.51□□□□□ -0.09
LINC01550-206ENST00000556462 INSRP06213 1382 aa14.51□□□□□ -0.09
LINC01550-206ENST00000556462 TTC21AQ8NDW8 1320 aa14.51□□□□□ -0.09
LINC01550-206ENST00000556462 COG3Q96JB2 828 aa14.51□□□□□ -0.09
LINC01550-206ENST00000556462 DCCP43146 1447 aa14.5□□□□□ -0.09
LINC01550-206ENST00000556462 LRRC7Q96NW7 1537 aa14.5□□□□□ -0.09
LINC01550-206ENST00000556462 ATF3P18847 181 aa14.5□□□□□ -0.09
LINC01550-206ENST00000556462 WDR43Q15061 677 aaKnown RBP eCLIP14.5□□□□□ -0.09
LINC01550-206ENST00000556462 POLKQ9UBT6 870 aa14.5□□□□□ -0.09
LINC01550-206ENST00000556462 C1orf167Q5SNV9 1468 aa14.49□□□□□ -0.09
LINC01550-206ENST00000556462 ZBED9Q6R2W3 1325 aa14.49□□□□□ -0.09
LINC01550-206ENST00000556462 OVOS2A0A0J9YW53 1432 aa14.48□□□□□ -0.09
LINC01550-206ENST00000556462 OVOS2Q6IE36 1432 aa14.48□□□□□ -0.09
LINC01550-206ENST00000556462 AATKQ6ZMQ8 1374 aa14.48□□□□□ -0.09
LINC01550-206ENST00000556462 CADPS2Q86UW7 1296 aa14.48□□□□□ -0.09
LINC01550-206ENST00000556462 MST1RQ04912 1400 aa14.48□□□□□ -0.09
LINC01550-206ENST00000556462 PNPLA6Q8IY17 1366 aa14.47□□□□□ -0.09
LINC01550-206ENST00000556462 CFAP53Q96M91 514 aa14.47□□□□□ -0.09
LINC01550-206ENST00000556462 BLMP54132 1417 aaPredicted RBP14.47□□□□□ -0.09
LINC01550-206ENST00000556462 MSH6P52701 1360 aa14.47□□□□□ -0.09
LINC01550-206ENST00000556462 USP31Q70CQ4 1352 aa14.47□□□□□ -0.09
LINC01550-206ENST00000556462 FOXO3O43524 673 aa14.46□□□□□ -0.09
LINC01550-206ENST00000556462 XIRP1Q702N8 1843 aaKnown RBP14.46□□□□□ -0.09
LINC01550-206ENST00000556462 SENP3-EIF4A1A0A087X0R7 540 aa14.46□□□□□ -0.09
LINC01550-206ENST00000556462 PSME1Q06323 249 aa14.46□□□□□ -0.09
LINC01550-206ENST00000556462 EMILIN1Q9Y6C2 1016 aa14.45□□□□□ -0.1
LINC01550-206ENST00000556462 COL3A1P02461 1466 aaPredicted RBP14.44□□□□□ -0.1
LINC01550-206ENST00000556462 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
LINC01550-206ENST00000556462 RRS1Q15050 365 aaKnown RBP14.44□□□□□ -0.1
LINC01550-206ENST00000556462 SHPRHQ149N8 1683 aa14.43□□□□□ -0.1
LINC01550-206ENST00000556462 NLRP6P59044 892 aa14.43□□□□□ -0.1
LINC01550-206ENST00000556462 ABTB2Q8N961 1025 aa14.43□□□□□ -0.1
LINC01550-206ENST00000556462 SMG6Q86US8 1419 aaKnown RBP14.43□□□□□ -0.1
LINC01550-206ENST00000556462 PIK3C2AO00443 1686 aa14.43□□□□□ -0.1
LINC01550-206ENST00000556462 MAP2P11137 1827 aaKnown RBP14.42□□□□□ -0.1
LINC01550-206ENST00000556462 PPM1GO15355 546 aaPredicted RBP14.42□□□□□ -0.1
LINC01550-206ENST00000556462 XPCQ01831 940 aaPredicted RBP14.42□□□□□ -0.1
LINC01550-206ENST00000556462 NUTM2GQ5VZR2 741 aa14.42□□□□□ -0.1
LINC01550-206ENST00000556462 KRT28Q7Z3Y7 464 aa14.41□□□□□ -0.1
LINC01550-206ENST00000556462 DIAPH1O60610 1272 aaKnown RBP14.4□□□□□ -0.1
LINC01550-206ENST00000556462 CCDC146Q8IYE0 955 aa14.4□□□□□ -0.1
LINC01550-206ENST00000556462 NUDCQ9Y266 331 aa14.4□□□□□ -0.1
LINC01550-206ENST00000556462 SALL2Q9Y467 1007 aaPredicted RBP14.4□□□□□ -0.1
LINC01550-206ENST00000556462 KIF1AQ12756 1690 aa14.39□□□□□ -0.11
LINC01550-206ENST00000556462 U2AF1L5P0DN76 240 aaPredicted RBP14.39□□□□□ -0.11
LINC01550-206ENST00000556462 U2AF1Q01081 240 aaKnown RBP eCLIP14.39□□□□□ -0.11
LINC01550-206ENST00000556462 SLAIN2Q9P270 581 aa14.39□□□□□ -0.11
LINC01550-206ENST00000556462 CDK12Q9NYV4 1490 aaPredicted RBP14.39□□□□□ -0.11
LINC01550-206ENST00000556462 SOX12O15370 315 aa14.38□□□□□ -0.11
LINC01550-206ENST00000556462 DDX17Q92841 729 aaKnown RBP14.38□□□□□ -0.11
LINC01550-206ENST00000556462 IL13P35225 146 aa14.38□□□□□ -0.11
LINC01550-206ENST00000556462 BRINP3Q76B58 766 aa14.38□□□□□ -0.11
LINC01550-206ENST00000556462 MARF1Q9Y4F3 1742 aaKnown RBP14.37□□□□□ -0.11
LINC01550-206ENST00000556462 MAP3K19Q56UN5 1328 aa14.37□□□□□ -0.11
LINC01550-206ENST00000556462 USP54Q70EL1 1684 aa14.37□□□□□ -0.11
LINC01550-206ENST00000556462 APAF1O14727 1248 aa14.37□□□□□ -0.11
LINC01550-206ENST00000556462 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
LINC01550-206ENST00000556462 NPHP3Q7Z494 1330 aa14.36□□□□□ -0.11
LINC01550-206ENST00000556462 RUNDC1Q96C34 613 aa14.36□□□□□ -0.11
LINC01550-206ENST00000556462 TRPM3Q9HCF6 1732 aaPredicted RBP14.36□□□□□ -0.11
LINC01550-206ENST00000556462 HSP90AB2PQ58FF8 381 aa14.35□□□□□ -0.11
LINC01550-206ENST00000556462 PLEKHF1Q96S99 279 aa14.35□□□□□ -0.11
LINC01550-206ENST00000556462 LTBP4Q8N2S1 1624 aa14.35□□□□□ -0.11
LINC01550-206ENST00000556462 ZNF521Q96K83 1311 aa14.34□□□□□ -0.11
LINC01550-206ENST00000556462 PEAK1Q9H792 1746 aa14.34□□□□□ -0.11
LINC01550-206ENST00000556462 SBNO1A3KN83 1393 aa14.34□□□□□ -0.11
LINC01550-206ENST00000556462 EIF4A2Q14240 407 aaKnown RBP14.34□□□□□ -0.11
LINC01550-206ENST00000556462 FCHSD2O94868 740 aa14.33□□□□□ -0.12
LINC01550-206ENST00000556462 PDE3BQ13370 1112 aa14.33□□□□□ -0.12
LINC01550-206ENST00000556462 LMOD2Q6P5Q4 547 aa14.33□□□□□ -0.12
LINC01550-206ENST00000556462 TCP11L2Q8N4U5 519 aa14.33□□□□□ -0.12
LINC01550-206ENST00000556462 KCNH5Q8NCM2 988 aa14.33□□□□□ -0.12
LINC01550-206ENST00000556462 GCP02774 474 aa14.32□□□□□ -0.12
LINC01550-206ENST00000556462 AEBP2Q6ZN18 517 aaPredicted RBP14.32□□□□□ -0.12
LINC01550-206ENST00000556462 USP19O94966 1318 aa14.32□□□□□ -0.12
LINC01550-206ENST00000556462 PXDNQ92626 1479 aa14.32□□□□□ -0.12
LINC01550-206ENST00000556462 FLT4P35916 1363 aa14.32□□□□□ -0.12
LINC01550-206ENST00000556462 KIF24Q5T7B8 1368 aa14.32□□□□□ -0.12
LINC01550-206ENST00000556462 AMPHP49418 695 aa14.32□□□□□ -0.12
LINC01550-206ENST00000556462 NGEFQ8N5V2 710 aa14.32□□□□□ -0.12
LINC01550-206ENST00000556462 RSPH6AQ9H0K4 717 aa14.32□□□□□ -0.12
LINC01550-206ENST00000556462 NFAT5O94916 1531 aa14.31□□□□□ -0.12
LINC01550-206ENST00000556462 CDCA7LQ96GN5 454 aa14.31□□□□□ -0.12
LINC01550-206ENST00000556462 HOXC9P31274 260 aa14.3□□□□□ -0.12
LINC01550-206ENST00000556462 IQSEC2Q5JU85 1478 aa14.3□□□□□ -0.12
LINC01550-206ENST00000556462 ALS2Q96Q42 1657 aa14.3□□□□□ -0.12
LINC01550-206ENST00000556462 SOS2Q07890 1332 aaPredicted RBP14.3□□□□□ -0.12
LINC01550-206ENST00000556462 SPATA31A3Q5VYP0 1347 aa14.3□□□□□ -0.12
LINC01550-206ENST00000556462 HMOX1P09601 288 aa14.3□□□□□ -0.12
LINC01550-206ENST00000556462 PHF23Q9BUL5 403 aaPredicted RBP14.3□□□□□ -0.12
LINC01550-206ENST00000556462 SLIT3O75094 1523 aa14.3□□□□□ -0.12
LINC01550-206ENST00000556462 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms