RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 TRPM3Q9HCF6 1732 aaPredicted RBP13.06□□□□□ -0.32
LINC00520-204ENST00000556417 NWD2Q9ULI1 1742 aa13.06□□□□□ -0.32
LINC00520-204ENST00000556417 BRWD3Q6RI45 1802 aa13.05□□□□□ -0.32
LINC00520-204ENST00000556417 PAK3O75914 559 aaPredicted RBP13.05□□□□□ -0.32
LINC00520-204ENST00000556417 NUDT16Q96DE0 195 aaKnown RBP13.05□□□□□ -0.32
LINC00520-204ENST00000556417 A0A0G2JS52 829 aa13.04□□□□□ -0.32
LINC00520-204ENST00000556417 MYT1Q01538 1121 aa13.04□□□□□ -0.32
LINC00520-204ENST00000556417 ALS2Q96Q42 1657 aa13.04□□□□□ -0.32
LINC00520-204ENST00000556417 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
LINC00520-204ENST00000556417 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
LINC00520-204ENST00000556417 CDK19Q9BWU1 502 aa13.03□□□□□ -0.32
LINC00520-204ENST00000556417 FAM182BQ5T319 152 aa13.02□□□□□ -0.33
LINC00520-204ENST00000556417 PRDM11Q9NQV5 511 aa13.02□□□□□ -0.33
LINC00520-204ENST00000556417 ATP7BP35670 1465 aa13.02□□□□□ -0.33
LINC00520-204ENST00000556417 NRAPQ86VF7 1730 aa13.02□□□□□ -0.33
LINC00520-204ENST00000556417 BAG6P46379 1132 aa13.01□□□□□ -0.33
LINC00520-204ENST00000556417 COL14A1Q05707 1796 aaKnown RBP13.01□□□□□ -0.33
LINC00520-204ENST00000556417 KIAA0232Q92628 1395 aa13□□□□□ -0.33
LINC00520-204ENST00000556417 ACEP12821 1306 aa13□□□□□ -0.33
LINC00520-204ENST00000556417 NBPF8Q3BBV2 869 aa13□□□□□ -0.33
LINC00520-204ENST00000556417 CCDC61Q9Y6R9 512 aa13□□□□□ -0.33
LINC00520-204ENST00000556417 POLR3AO14802 1390 aaPredicted RBP12.99□□□□□ -0.33
LINC00520-204ENST00000556417 SPATA31A1Q5TZJ5 1347 aa12.99□□□□□ -0.33
LINC00520-204ENST00000556417 EN1Q05925 392 aaPredicted RBP12.99□□□□□ -0.33
LINC00520-204ENST00000556417 CHRNA2Q15822 529 aa12.99□□□□□ -0.33
LINC00520-204ENST00000556417 NUTM2GQ5VZR2 741 aa12.99□□□□□ -0.33
LINC00520-204ENST00000556417 PLEKHG3A1L390 1219 aa12.98□□□□□ -0.33
LINC00520-204ENST00000556417 ZC3H6P61129 1189 aaKnown RBP12.98□□□□□ -0.33
LINC00520-204ENST00000556417 NBPF1Q3BBV0 1214 aa12.98□□□□□ -0.33
LINC00520-204ENST00000556417 CRYBG1Q9Y4K1 1723 aa12.98□□□□□ -0.33
LINC00520-204ENST00000556417 ARHGEF28Q8N1W1 1705 aaKnown RBP12.97□□□□□ -0.33
LINC00520-204ENST00000556417 PSDA5PKW4 1024 aaPredicted RBP12.97□□□□□ -0.33
LINC00520-204ENST00000556417 STRN4Q9NRL3 753 aa12.97□□□□□ -0.33
LINC00520-204ENST00000556417 THSD7AQ9UPZ6 1657 aa12.96□□□□□ -0.34
LINC00520-204ENST00000556417 ABTB2Q8N961 1025 aa12.95□□□□□ -0.34
LINC00520-204ENST00000556417 EZH2Q15910 746 aaKnown RBP12.94□□□□□ -0.34
LINC00520-204ENST00000556417 FAM196AQ6ZSG2 479 aa12.94□□□□□ -0.34
LINC00520-204ENST00000556417 USP35Q9P2H5 1018 aa12.94□□□□□ -0.34
LINC00520-204ENST00000556417 DISP2A7MBM2 1401 aa12.94□□□□□ -0.34
LINC00520-204ENST00000556417 TRIM37O94972 964 aa12.93□□□□□ -0.34
LINC00520-204ENST00000556417 EVA1CP58658 441 aa12.93□□□□□ -0.34
LINC00520-204ENST00000556417 BARGINQ6ZT62 677 aa12.93□□□□□ -0.34
LINC00520-204ENST00000556417 CAMKK2Q96RR4 588 aa12.93□□□□□ -0.34
LINC00520-204ENST00000556417 CABP2Q9NPB3 220 aa12.93□□□□□ -0.34
LINC00520-204ENST00000556417 USP19O94966 1318 aa12.92□□□□□ -0.34
LINC00520-204ENST00000556417 PHRF1Q9P1Y6 1649 aaKnown RBP12.92□□□□□ -0.34
LINC00520-204ENST00000556417 GCP02774 474 aa12.92□□□□□ -0.34
LINC00520-204ENST00000556417 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
LINC00520-204ENST00000556417 R3HDM1Q15032 1099 aaKnown RBP12.92□□□□□ -0.34
LINC00520-204ENST00000556417 ITSN1Q15811 1721 aa12.92□□□□□ -0.34
LINC00520-204ENST00000556417 LARP1Q6PKG0 1096 aaKnown RBP12.92□□□□□ -0.34
LINC00520-204ENST00000556417 SSH2Q76I76 1423 aa12.92□□□□□ -0.34
LINC00520-204ENST00000556417 CPDO75976 1380 aa12.92□□□□□ -0.34
LINC00520-204ENST00000556417 NLRP13Q86W25 1043 aa12.91□□□□□ -0.34
LINC00520-204ENST00000556417 TOPAZ1Q8N9V7 1692 aa12.91□□□□□ -0.34
LINC00520-204ENST00000556417 CAMTA1Q9Y6Y1 1673 aa12.91□□□□□ -0.34
LINC00520-204ENST00000556417 CENPJQ9HC77 1338 aaPredicted RBP12.9□□□□□ -0.34
LINC00520-204ENST00000556417 PPIP5K1Q6PFW1 1433 aa12.9□□□□□ -0.34
LINC00520-204ENST00000556417 APBA3O96018 575 aa12.9□□□□□ -0.34
LINC00520-204ENST00000556417 PDE3BQ13370 1112 aa12.9□□□□□ -0.34
LINC00520-204ENST00000556417 TCP11L2Q8N4U5 519 aa12.9□□□□□ -0.34
LINC00520-204ENST00000556417 LRP5O75197 1615 aa12.9□□□□□ -0.34
LINC00520-204ENST00000556417 KIAA1210Q9ULL0 1709 aa12.9□□□□□ -0.34
LINC00520-204ENST00000556417 RGPD1P0DJD0 1748 aa12.89□□□□□ -0.35
LINC00520-204ENST00000556417 ADRA2BP18089 450 aa12.89□□□□□ -0.35
LINC00520-204ENST00000556417 CABP1Q9NZU7 370 aa12.89□□□□□ -0.35
LINC00520-204ENST00000556417 THRAP3Q9Y2W1 955 aaKnown RBP12.89□□□□□ -0.35
LINC00520-204ENST00000556417 NRKQ7Z2Y5 1582 aa12.89□□□□□ -0.35
LINC00520-204ENST00000556417 LMO7Q8WWI1 1683 aa12.87□□□□□ -0.35
LINC00520-204ENST00000556417 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
LINC00520-204ENST00000556417 L3MBTL2Q969R5 705 aa12.87□□□□□ -0.35
LINC00520-204ENST00000556417 TNS1Q9HBL0 1735 aaKnown RBP12.87□□□□□ -0.35
LINC00520-204ENST00000556417 PARD3Q8TEW0 1356 aa12.86□□□□□ -0.35
LINC00520-204ENST00000556417 NLRP6P59044 892 aa12.86□□□□□ -0.35
LINC00520-204ENST00000556417 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
LINC00520-204ENST00000556417 USP6P35125 1406 aa12.85□□□□□ -0.35
LINC00520-204ENST00000556417 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
LINC00520-204ENST00000556417 SIN3AQ96ST3 1273 aa12.84□□□□□ -0.35
LINC00520-204ENST00000556417 CRB1P82279 1406 aa12.83□□□□□ -0.36
LINC00520-204ENST00000556417 ZBTB7CA1YPR0 619 aa12.83□□□□□ -0.36
LINC00520-204ENST00000556417 AXIN2Q9Y2T1 843 aa12.83□□□□□ -0.36
LINC00520-204ENST00000556417 EVC2Q86UK5 1308 aa12.83□□□□□ -0.36
LINC00520-204ENST00000556417 C11orf95C9JLR9 678 aaPredicted RBP12.81□□□□□ -0.36
LINC00520-204ENST00000556417 NBPF14Q5TI25 921 aa12.81□□□□□ -0.36
LINC00520-204ENST00000556417 ARHGEF25Q86VW2 580 aa12.81□□□□□ -0.36
LINC00520-204ENST00000556417 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
LINC00520-204ENST00000556417 SLIT3O75094 1523 aa12.81□□□□□ -0.36
LINC00520-204ENST00000556417 TTC21BQ7Z4L5 1316 aa12.81□□□□□ -0.36
LINC00520-204ENST00000556417 DDB1Q16531 1140 aa12.8□□□□□ -0.36
LINC00520-204ENST00000556417 TOM1L2Q6ZVM7 507 aa12.8□□□□□ -0.36
LINC00520-204ENST00000556417 QRICH2Q9H0J4 1663 aa12.8□□□□□ -0.36
LINC00520-204ENST00000556417 WDR17Q8IZU2 1322 aa12.79□□□□□ -0.36
LINC00520-204ENST00000556417 PARP4Q9UKK3 1724 aaKnown RBP12.79□□□□□ -0.36
LINC00520-204ENST00000556417 OVOS2A0A0G2JMS6 1433 aa12.79□□□□□ -0.36
LINC00520-204ENST00000556417 OVOS2A0A0J9YW53 1432 aa12.79□□□□□ -0.36
LINC00520-204ENST00000556417 OVOS2Q6IE36 1432 aa12.79□□□□□ -0.36
LINC00520-204ENST00000556417 RREB1Q92766 1687 aa12.78□□□□□ -0.36
LINC00520-204ENST00000556417 PLSCR1O15162 318 aa12.78□□□□□ -0.36
LINC00520-204ENST00000556417 NEUROD1Q13562 356 aa12.78□□□□□ -0.36
LINC00520-204ENST00000556417 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms