RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 SRPK2P78362 688 aaKnown RBP24.69■■□□□ 1.54
GPHN-211ENST00000556020 CCDC9Q9Y3X0 531 aaKnown RBP24.69■■□□□ 1.54
GPHN-211ENST00000556020 FAM83GA6ND36 823 aa24.67■■□□□ 1.54
GPHN-211ENST00000556020 CCDC61Q9Y6R9 512 aa24.67■■□□□ 1.54
GPHN-211ENST00000556020 CRYBG1Q9Y4K1 1723 aa24.66■■□□□ 1.54
GPHN-211ENST00000556020 ACEP12821 1306 aa24.66■■□□□ 1.54
GPHN-211ENST00000556020 CABP2Q9NPB3 220 aa24.66■■□□□ 1.54
GPHN-211ENST00000556020 NUTM2GQ5VZR2 741 aa24.65■■□□□ 1.54
GPHN-211ENST00000556020 ROCK2O75116 1388 aaKnown RBP24.65■■□□□ 1.54
GPHN-211ENST00000556020 COL14A1Q05707 1796 aaKnown RBP24.64■■□□□ 1.53
GPHN-211ENST00000556020 VPS72Q15906 364 aa24.63■■□□□ 1.53
GPHN-211ENST00000556020 NBPF8Q3BBV2 869 aa24.63■■□□□ 1.53
GPHN-211ENST00000556020 POLR3AO14802 1390 aaPredicted RBP24.63■■□□□ 1.53
GPHN-211ENST00000556020 PPIP5K1Q6PFW1 1433 aa24.62■■□□□ 1.53
GPHN-211ENST00000556020 NRAPQ86VF7 1730 aa24.62■■□□□ 1.53
GPHN-211ENST00000556020 BTG4Q9NY30 223 aa24.62■■□□□ 1.53
GPHN-211ENST00000556020 BRWD3Q6RI45 1802 aa24.61■■□□□ 1.53
GPHN-211ENST00000556020 PLEKHG3A1L390 1219 aa24.61■■□□□ 1.53
GPHN-211ENST00000556020 PHRF1Q9P1Y6 1649 aaKnown RBP24.61■■□□□ 1.53
GPHN-211ENST00000556020 PRDM11Q9NQV5 511 aa24.59■■□□□ 1.53
GPHN-211ENST00000556020 TRIM26Q12899 539 aaPredicted RBP24.58■■□□□ 1.53
GPHN-211ENST00000556020 A0A0G2JS52 829 aa24.57■■□□□ 1.52
GPHN-211ENST00000556020 MYT1Q01538 1121 aa24.57■■□□□ 1.52
GPHN-211ENST00000556020 SEPT12Q8IYM1 358 aa24.57■■□□□ 1.52
GPHN-211ENST00000556020 ABTB2Q8N961 1025 aa24.56■■□□□ 1.52
GPHN-211ENST00000556020 KIAA0232Q92628 1395 aa24.55■■□□□ 1.52
GPHN-211ENST00000556020 TONSLQ96HA7 1378 aa24.55■■□□□ 1.52
GPHN-211ENST00000556020 EVC2Q86UK5 1308 aa24.55■■□□□ 1.52
GPHN-211ENST00000556020 ZC3H6P61129 1189 aaKnown RBP24.54■■□□□ 1.52
GPHN-211ENST00000556020 CHRNA2Q15822 529 aa24.54■■□□□ 1.52
GPHN-211ENST00000556020 CABP1Q9NZU7 370 aa24.54■■□□□ 1.52
GPHN-211ENST00000556020 FAM98CQ17RN3 349 aaKnown RBP24.52■■□□□ 1.52
GPHN-211ENST00000556020 EP400Q96L91 3159 aa24.51■■□□□ 1.51
GPHN-211ENST00000556020 NRKQ7Z2Y5 1582 aa24.5■■□□□ 1.51
GPHN-211ENST00000556020 CARD11Q9BXL7 1154 aa24.49■■□□□ 1.51
GPHN-211ENST00000556020 STRN4Q9NRL3 753 aa24.49■■□□□ 1.51
GPHN-211ENST00000556020 ONECUT3O60422 494 aaPredicted RBP24.48■■□□□ 1.51
GPHN-211ENST00000556020 USP6P35125 1406 aa24.47■■□□□ 1.51
GPHN-211ENST00000556020 SPATA31A5Q5VU36 1347 aa24.47■■□□□ 1.51
GPHN-211ENST00000556020 SPATA31A7Q8IWB4 1347 aa24.47■■□□□ 1.51
GPHN-211ENST00000556020 KRT27Q7Z3Y8 459 aa24.47■■□□□ 1.51
GPHN-211ENST00000556020 NLRP13Q86W25 1043 aa24.47■■□□□ 1.51
GPHN-211ENST00000556020 USP19O94966 1318 aa24.45■■□□□ 1.5
GPHN-211ENST00000556020 CCDC125Q86Z20 511 aa24.45■■□□□ 1.5
GPHN-211ENST00000556020 ZBTB7CA1YPR0 619 aa24.44■■□□□ 1.5
GPHN-211ENST00000556020 EVA1CP58658 441 aa24.43■■□□□ 1.5
GPHN-211ENST00000556020 BLMP54132 1417 aaPredicted RBP24.43■■□□□ 1.5
GPHN-211ENST00000556020 BRD4O60885 1362 aaPredicted RBP24.42■■□□□ 1.5
GPHN-211ENST00000556020 AKAP12Q02952 1782 aa24.42■■□□□ 1.5
GPHN-211ENST00000556020 NLRP6P59044 892 aa24.42■■□□□ 1.5
GPHN-211ENST00000556020 USP35Q9P2H5 1018 aa24.42■■□□□ 1.5
GPHN-211ENST00000556020 PIK3C2AO00443 1686 aa24.41■■□□□ 1.5
GPHN-211ENST00000556020 GCP02774 474 aa24.41■■□□□ 1.5
GPHN-211ENST00000556020 SPATA31A1Q5TZJ5 1347 aa24.4■■□□□ 1.5
GPHN-211ENST00000556020 THSD7AQ9UPZ6 1657 aa24.4■■□□□ 1.5
GPHN-211ENST00000556020 CAMTA1Q9Y6Y1 1673 aa24.4■■□□□ 1.5
GPHN-211ENST00000556020 SF3B2Q13435 895 aaKnown RBP24.39■■□□□ 1.49
GPHN-211ENST00000556020 LMO7Q8WWI1 1683 aa24.39■■□□□ 1.49
GPHN-211ENST00000556020 CPDO75976 1380 aa24.39■■□□□ 1.49
GPHN-211ENST00000556020 SSH2Q76I76 1423 aa24.38■■□□□ 1.49
GPHN-211ENST00000556020 FAM182BQ5T319 152 aa24.38■■□□□ 1.49
GPHN-211ENST00000556020 DEFB132Q7Z7B7 95 aa24.37■■□□□ 1.49
GPHN-211ENST00000556020 LARP1Q6PKG0 1096 aaKnown RBP24.36■■□□□ 1.49
GPHN-211ENST00000556020 ZNF692Q9BU19 519 aaPredicted RBP24.36■■□□□ 1.49
GPHN-211ENST00000556020 SBNO2Q9Y2G9 1366 aa24.36■■□□□ 1.49
GPHN-211ENST00000556020 TTC21BQ7Z4L5 1316 aa24.35■■□□□ 1.49
GPHN-211ENST00000556020 SLIT3O75094 1523 aa24.35■■□□□ 1.49
GPHN-211ENST00000556020 KTN1Q86UP2 1357 aaKnown RBP24.35■■□□□ 1.49
GPHN-211ENST00000556020 SOX12O15370 315 aa24.34■■□□□ 1.49
GPHN-211ENST00000556020 TMC1Q8TDI8 760 aa24.34■■□□□ 1.49
GPHN-211ENST00000556020 ZRANB1Q9UGI0 708 aa24.34■■□□□ 1.49
GPHN-211ENST00000556020 MON2Q7Z3U7 1717 aa24.33■■□□□ 1.49
GPHN-211ENST00000556020 CPSF1Q10570 1443 aaKnown RBP24.32■■□□□ 1.48
GPHN-211ENST00000556020 COL5A2P05997 1499 aaPredicted RBP24.31■■□□□ 1.48
GPHN-211ENST00000556020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.3■■□□□ 1.485e-6■■■■□ 20.3
GPHN-211ENST00000556020 TTC21AQ8NDW8 1320 aa24.3■■□□□ 1.48
GPHN-211ENST00000556020 RGPD1P0DJD0 1748 aa24.29■■□□□ 1.48
GPHN-211ENST00000556020 TCP11L2Q8N4U5 519 aa24.28■■□□□ 1.48
GPHN-211ENST00000556020 BARGINQ6ZT62 677 aa24.27■■□□□ 1.48
GPHN-211ENST00000556020 SLC12A5Q9H2X9 1139 aa24.27■■□□□ 1.48
GPHN-211ENST00000556020 AATKQ6ZMQ8 1374 aa24.27■■□□□ 1.48
GPHN-211ENST00000556020 ST20-MTHFSA0A0A6YYL1 179 aa24.26■■□□□ 1.47
GPHN-211ENST00000556020 BAG6P46379 1132 aa24.26■■□□□ 1.47
GPHN-211ENST00000556020 PCGF6Q9BYE7 350 aa24.26■■□□□ 1.47
GPHN-211ENST00000556020 COL18A1P39060 1754 aa24.26■■□□□ 1.47
GPHN-211ENST00000556020 RGPD5Q99666 1765 aa24.26■■□□□ 1.47
GPHN-211ENST00000556020 CD163L1Q9NR16 1453 aa24.26■■□□□ 1.47
GPHN-211ENST00000556020 PDE3BQ13370 1112 aa24.25■■□□□ 1.47
GPHN-211ENST00000556020 HDGFL2Q7Z4V5 671 aaPredicted RBP24.25■■□□□ 1.47
GPHN-211ENST00000556020 KCNH5Q8NCM2 988 aa24.25■■□□□ 1.47
GPHN-211ENST00000556020 CRB1P82279 1406 aa24.25■■□□□ 1.47
GPHN-211ENST00000556020 TOM1L2Q6ZVM7 507 aa24.23■■□□□ 1.47
GPHN-211ENST00000556020 NME9Q86XW9 330 aa24.23■■□□□ 1.47
GPHN-211ENST00000556020 TNS1Q9HBL0 1735 aaKnown RBP24.23■■□□□ 1.47
GPHN-211ENST00000556020 AXIN2Q9Y2T1 843 aa24.22■■□□□ 1.47
GPHN-211ENST00000556020 NFAT5O94916 1531 aa24.21■■□□□ 1.47
GPHN-211ENST00000556020 EN1Q05925 392 aaPredicted RBP24.21■■□□□ 1.47
GPHN-211ENST00000556020 FAM196AQ6ZSG2 479 aa24.21■■□□□ 1.47
GPHN-211ENST00000556020 ARHGEF25Q86VW2 580 aa24.21■■□□□ 1.47
GPHN-211ENST00000556020 TESK2Q96S53 571 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms