RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 TONSLQ96HA7 1378 aa5.61□□□□□ -1.51
LINC00648-202ENST00000555985 SPATA31A3Q5VYP0 1347 aa5.6□□□□□ -1.51
LINC00648-202ENST00000555985 NPHP3Q7Z494 1330 aa5.6□□□□□ -1.51
LINC00648-202ENST00000555985 CENPJQ9HC77 1338 aaPredicted RBP5.6□□□□□ -1.51
LINC00648-202ENST00000555985 CENPBP07199 599 aaPredicted RBP5.6□□□□□ -1.51
LINC00648-202ENST00000555985 C14orf37Q86TY3 774 aa5.6□□□□□ -1.51
LINC00648-202ENST00000555985 TESK2Q96S53 571 aa5.6□□□□□ -1.51
LINC00648-202ENST00000555985 BCL11AQ9H165 835 aa5.6□□□□□ -1.51
LINC00648-202ENST00000555985 COL18A1P39060 1754 aa5.6□□□□□ -1.51
LINC00648-202ENST00000555985 BRD4O60885 1362 aaPredicted RBP5.6□□□□□ -1.51
LINC00648-202ENST00000555985 SLIT2O94813 1529 aa5.6□□□□□ -1.51
LINC00648-202ENST00000555985 COL14A1Q05707 1796 aaKnown RBP5.59□□□□□ -1.51
LINC00648-202ENST00000555985 CDK12Q9NYV4 1490 aaPredicted RBP5.59□□□□□ -1.51
LINC00648-202ENST00000555985 LRRC59Q96AG4 307 aaKnown RBP5.59□□□□□ -1.51
LINC00648-202ENST00000555985 PUS7Q96PZ0 661 aaKnown RBP5.59□□□□□ -1.51
LINC00648-202ENST00000555985 CDK19Q9BWU1 502 aa5.59□□□□□ -1.51
LINC00648-202ENST00000555985 PHF8Q9UPP1 1060 aa5.59□□□□□ -1.51
LINC00648-202ENST00000555985 MINK1Q8N4C8 1332 aaPredicted RBP5.59□□□□□ -1.52
LINC00648-202ENST00000555985 ESCO1Q5FWF5 840 aa5.58□□□□□ -1.52
LINC00648-202ENST00000555985 ILDR2Q71H61 639 aa5.58□□□□□ -1.52
LINC00648-202ENST00000555985 NUDT16Q96DE0 195 aaKnown RBP5.58□□□□□ -1.52
LINC00648-202ENST00000555985 POGKQ9P215 609 aa5.58□□□□□ -1.52
LINC00648-202ENST00000555985 PPIP5K1Q6PFW1 1433 aa5.58□□□□□ -1.52
LINC00648-202ENST00000555985 BCL9LQ86UU0 1499 aa5.58□□□□□ -1.52
LINC00648-202ENST00000555985 ATRNO75882 1429 aa5.58□□□□□ -1.52
LINC00648-202ENST00000555985 USP6P35125 1406 aa5.58□□□□□ -1.52
LINC00648-202ENST00000555985 WNK3Q9BYP7 1800 aa5.58□□□□□ -1.52
LINC00648-202ENST00000555985 NFAT5O94916 1531 aa5.58□□□□□ -1.52
LINC00648-202ENST00000555985 ABCC6O95255 1503 aa5.58□□□□□ -1.52
LINC00648-202ENST00000555985 HIRIP3Q9BW71 556 aaPredicted RBP5.57□□□□□ -1.52
LINC00648-202ENST00000555985 USP19O94966 1318 aa5.57□□□□□ -1.52
LINC00648-202ENST00000555985 ARHGEF10O15013 1369 aa5.57□□□□□ -1.52
LINC00648-202ENST00000555985 GLI3P10071 1580 aa5.57□□□□□ -1.52
LINC00648-202ENST00000555985 SAFB2Q14151 953 aaKnown RBP eCLIP5.57□□□□□ -1.52
LINC00648-202ENST00000555985 ZNF219Q9P2Y4 722 aaPredicted RBP5.57□□□□□ -1.52
LINC00648-202ENST00000555985 THSD7AQ9UPZ6 1657 aa5.57□□□□□ -1.52
LINC00648-202ENST00000555985 ANKRD26Q9UPS8 1709 aa5.57□□□□□ -1.52
LINC00648-202ENST00000555985 DISP3Q9P2K9 1392 aa5.57□□□□□ -1.52
LINC00648-202ENST00000555985 FOXO3O43524 673 aa5.57□□□□□ -1.52
LINC00648-202ENST00000555985 KRT28Q7Z3Y7 464 aa5.57□□□□□ -1.52
LINC00648-202ENST00000555985 FNBP4Q8N3X1 1017 aaPredicted RBP5.57□□□□□ -1.52
LINC00648-202ENST00000555985 CCDC61Q9Y6R9 512 aa5.56□□□□□ -1.52
LINC00648-202ENST00000555985 ACEP12821 1306 aa5.56□□□□□ -1.52
LINC00648-202ENST00000555985 ATAD2Q6PL18 1390 aa5.56□□□□□ -1.52
LINC00648-202ENST00000555985 USP47Q96K76 1375 aa5.56□□□□□ -1.52
LINC00648-202ENST00000555985 POTEAQ6S8J7 498 aa5.56□□□□□ -1.52
LINC00648-202ENST00000555985 SPINK5Q9NQ38 1064 aaPredicted RBP5.56□□□□□ -1.52
LINC00648-202ENST00000555985 EVC2Q86UK5 1308 aa5.56□□□□□ -1.52
LINC00648-202ENST00000555985 NINLQ9Y2I6 1382 aa5.56□□□□□ -1.52
LINC00648-202ENST00000555985 KIF20BQ96Q89 1820 aa5.56□□□□□ -1.52
LINC00648-202ENST00000555985 CARD11Q9BXL7 1154 aa5.55□□□□□ -1.52
LINC00648-202ENST00000555985 ATF5Q9Y2D1 282 aaPredicted RBP5.55□□□□□ -1.52
LINC00648-202ENST00000555985 CPDO75976 1380 aa5.55□□□□□ -1.52
LINC00648-202ENST00000555985 USP31Q70CQ4 1352 aa5.55□□□□□ -1.52
LINC00648-202ENST00000555985 NUTM2FA1L443 756 aa5.55□□□□□ -1.52
LINC00648-202ENST00000555985 PSME1Q06323 249 aa5.54□□□□□ -1.52
LINC00648-202ENST00000555985 CABP2Q9NPB3 220 aa5.54□□□□□ -1.52
LINC00648-202ENST00000555985 LTN1O94822 1766 aa5.54□□□□□ -1.52
LINC00648-202ENST00000555985 BRWD3Q6RI45 1802 aa5.54□□□□□ -1.52
LINC00648-202ENST00000555985 CAMTA1Q9Y6Y1 1673 aa5.54□□□□□ -1.52
LINC00648-202ENST00000555985 OVOS2A0A0J9YW53 1432 aa5.54□□□□□ -1.52
LINC00648-202ENST00000555985 OVOS2Q6IE36 1432 aa5.54□□□□□ -1.52
LINC00648-202ENST00000555985 XPCQ01831 940 aaPredicted RBP5.54□□□□□ -1.52
LINC00648-202ENST00000555985 PMFBP1Q8TBY8 1022 aa5.54□□□□□ -1.52
LINC00648-202ENST00000555985 RGPD5Q99666 1765 aa5.54□□□□□ -1.52
LINC00648-202ENST00000555985 RGS12O14924 1447 aa5.54□□□□□ -1.52
LINC00648-202ENST00000555985 EDC4Q6P2E9 1401 aaKnown RBP5.53□□□□□ -1.52
LINC00648-202ENST00000555985 A0A1W2PP64 1363 aa5.53□□□□□ -1.52
LINC00648-202ENST00000555985 ST20-MTHFSA0A0A6YYL1 179 aa5.53□□□□□ -1.52
LINC00648-202ENST00000555985 PARP4Q9UKK3 1724 aaKnown RBP5.53□□□□□ -1.52
LINC00648-202ENST00000555985 AFF2P51816 1311 aa5.53□□□□□ -1.52
LINC00648-202ENST00000555985 PRKCSHP14314 528 aaPredicted RBP5.53□□□□□ -1.52
LINC00648-202ENST00000555985 CABP1Q9NZU7 370 aa5.53□□□□□ -1.52
LINC00648-202ENST00000555985 PEAK1Q9H792 1746 aa5.52□□□□□ -1.53
LINC00648-202ENST00000555985 FAM208AQ9UK61 1670 aaKnown RBP5.52□□□□□ -1.53
LINC00648-202ENST00000555985 ANKRD36BQ8N2N9 1353 aa5.52□□□□□ -1.53
LINC00648-202ENST00000555985 TTC21AQ8NDW8 1320 aa5.52□□□□□ -1.53
LINC00648-202ENST00000555985 CAPN15O75808 1086 aa5.52□□□□□ -1.53
LINC00648-202ENST00000555985 ZNF772Q68DY9 489 aaPredicted RBP5.52□□□□□ -1.53
LINC00648-202ENST00000555985 TTC21BQ7Z4L5 1316 aa5.51□□□□□ -1.53
LINC00648-202ENST00000555985 FAM83GA6ND36 823 aa5.51□□□□□ -1.53
LINC00648-202ENST00000555985 ONECUT3O60422 494 aaPredicted RBP5.51□□□□□ -1.53
LINC00648-202ENST00000555985 ZNF692Q9BU19 519 aaPredicted RBP5.51□□□□□ -1.53
LINC00648-202ENST00000555985 COL5A2P05997 1499 aaPredicted RBP5.51□□□□□ -1.53
LINC00648-202ENST00000555985 DSG3P32926 999 aa5.51□□□□□ -1.53
LINC00648-202ENST00000555985 SRPK2P78362 688 aaKnown RBP5.51□□□□□ -1.53
LINC00648-202ENST00000555985 LRRC37A3O60309 1634 aa5.5□□□□□ -1.53
LINC00648-202ENST00000555985 SOCS7O14512 581 aa5.5□□□□□ -1.53
LINC00648-202ENST00000555985 NGDNQ8NEJ9 315 aaKnown RBP5.5□□□□□ -1.53
LINC00648-202ENST00000555985 SHANK3Q9BYB0 1731 aa5.5□□□□□ -1.53
LINC00648-202ENST00000555985 EP400Q96L91 3159 aa5.5□□□□□ -1.53
LINC00648-202ENST00000555985 DIEXFQ68CQ4 756 aaKnown RBP5.5□□□□□ -1.53
LINC00648-202ENST00000555985 CCER1Q8TC90 406 aaPredicted RBP5.5□□□□□ -1.53
LINC00648-202ENST00000555985 CABLES1Q8TDN4 633 aa5.5□□□□□ -1.53
LINC00648-202ENST00000555985 AATKQ6ZMQ8 1374 aa5.5□□□□□ -1.53
LINC00648-202ENST00000555985 KTN1Q86UP2 1357 aaKnown RBP5.5□□□□□ -1.53
LINC00648-202ENST00000555985 TNS1Q9HBL0 1735 aaKnown RBP5.5□□□□□ -1.53
LINC00648-202ENST00000555985 NUTM2BA6NNL0 878 aaPredicted RBP5.49□□□□□ -1.53
LINC00648-202ENST00000555985 NUTM2EB1AL46 878 aaPredicted RBP5.49□□□□□ -1.53
LINC00648-202ENST00000555985 VPS72Q15906 364 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms