RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 ADGRB1O14514 1584 aa28.45■■■□□ 2.14
FOXN3-211ENST00000555855 PRDM11Q9NQV5 511 aa28.42■■■□□ 2.14
FOXN3-211ENST00000555855 TULP4Q9NRJ4 1543 aa28.41■■■□□ 2.14
FOXN3-211ENST00000555855 COL14A1Q05707 1796 aaKnown RBP28.41■■■□□ 2.14
FOXN3-211ENST00000555855 SPATA31A5Q5VU36 1347 aa28.41■■■□□ 2.14
FOXN3-211ENST00000555855 SPATA31A7Q8IWB4 1347 aa28.41■■■□□ 2.14
FOXN3-211ENST00000555855 TRPM3Q9HCF6 1732 aaPredicted RBP28.4■■■□□ 2.14
FOXN3-211ENST00000555855 NUDT16Q96DE0 195 aaKnown RBP28.39■■■□□ 2.14
FOXN3-211ENST00000555855 ALS2Q96Q42 1657 aa28.38■■■□□ 2.13
FOXN3-211ENST00000555855 PSDA5PKW4 1024 aaPredicted RBP28.37■■■□□ 2.13
FOXN3-211ENST00000555855 EN1Q05925 392 aaPredicted RBP28.37■■■□□ 2.13
FOXN3-211ENST00000555855 NRAPQ86VF7 1730 aa28.36■■■□□ 2.13
FOXN3-211ENST00000555855 FAM182BQ5T319 152 aa28.36■■■□□ 2.13
FOXN3-211ENST00000555855 HRCP23327 699 aa28.33■■■□□ 2.13
FOXN3-211ENST00000555855 CDK19Q9BWU1 502 aa28.33■■■□□ 2.13
FOXN3-211ENST00000555855 STRN4Q9NRL3 753 aa28.32■■■□□ 2.12
FOXN3-211ENST00000555855 CHRNA2Q15822 529 aa28.31■■■□□ 2.12
FOXN3-211ENST00000555855 KIAA0232Q92628 1395 aa28.3■■■□□ 2.12
FOXN3-211ENST00000555855 EVA1CP58658 441 aa28.3■■■□□ 2.12
FOXN3-211ENST00000555855 ZC3H6P61129 1189 aaKnown RBP28.3■■■□□ 2.12
FOXN3-211ENST00000555855 SPATA31A1Q5TZJ5 1347 aa28.29■■■□□ 2.12
FOXN3-211ENST00000555855 NUTM2GQ5VZR2 741 aa28.29■■■□□ 2.12
FOXN3-211ENST00000555855 FAM196AQ6ZSG2 479 aa28.28■■■□□ 2.12
FOXN3-211ENST00000555855 CCDC61Q9Y6R9 512 aa28.28■■■□□ 2.12
FOXN3-211ENST00000555855 NBPF8Q3BBV2 869 aa28.27■■■□□ 2.12
FOXN3-211ENST00000555855 RGPD1P0DJD0 1748 aa28.26■■■□□ 2.11
FOXN3-211ENST00000555855 ACEP12821 1306 aa28.25■■■□□ 2.11
FOXN3-211ENST00000555855 R3HDM1Q15032 1099 aaKnown RBP28.25■■■□□ 2.11
FOXN3-211ENST00000555855 ITSN1Q15811 1721 aa28.25■■■□□ 2.11
FOXN3-211ENST00000555855 LRP5O75197 1615 aa28.25■■■□□ 2.11
FOXN3-211ENST00000555855 ATP7BP35670 1465 aa28.24■■■□□ 2.11
FOXN3-211ENST00000555855 USP35Q9P2H5 1018 aa28.24■■■□□ 2.11
FOXN3-211ENST00000555855 TRIM37O94972 964 aa28.23■■■□□ 2.11
FOXN3-211ENST00000555855 PDE3BQ13370 1112 aa28.23■■■□□ 2.11
FOXN3-211ENST00000555855 EZH2Q15910 746 aaKnown RBP28.23■■■□□ 2.11
FOXN3-211ENST00000555855 ABTB2Q8N961 1025 aa28.23■■■□□ 2.11
FOXN3-211ENST00000555855 CRYBG1Q9Y4K1 1723 aa28.23■■■□□ 2.11
FOXN3-211ENST00000555855 PLEKHG3A1L390 1219 aa28.22■■■□□ 2.11
FOXN3-211ENST00000555855 ARHGEF28Q8N1W1 1705 aaKnown RBP28.21■■■□□ 2.11
FOXN3-211ENST00000555855 THSD7AQ9UPZ6 1657 aa28.2■■■□□ 2.11
FOXN3-211ENST00000555855 APBA3O96018 575 aa28.2■■■□□ 2.1
FOXN3-211ENST00000555855 POLR3AO14802 1390 aaPredicted RBP28.2■■■□□ 2.1
FOXN3-211ENST00000555855 DISP2A7MBM2 1401 aa28.19■■■□□ 2.1
FOXN3-211ENST00000555855 BARGINQ6ZT62 677 aa28.19■■■□□ 2.1
FOXN3-211ENST00000555855 CAMKK2Q96RR4 588 aa28.18■■■□□ 2.1
FOXN3-211ENST00000555855 NLRP13Q86W25 1043 aa28.17■■■□□ 2.1
FOXN3-211ENST00000555855 SRPK2P78362 688 aaKnown RBP28.15■■■□□ 2.1
FOXN3-211ENST00000555855 TCP11L2Q8N4U5 519 aa28.15■■■□□ 2.1
FOXN3-211ENST00000555855 LARP1Q6PKG0 1096 aaKnown RBP28.14■■■□□ 2.1
FOXN3-211ENST00000555855 PHRF1Q9P1Y6 1649 aaKnown RBP28.14■■■□□ 2.09
FOXN3-211ENST00000555855 SSH2Q76I76 1423 aa28.13■■■□□ 2.09
FOXN3-211ENST00000555855 NBPF1Q3BBV0 1214 aa28.13■■■□□ 2.09
FOXN3-211ENST00000555855 PARD3Q8TEW0 1356 aa28.12■■■□□ 2.09
FOXN3-211ENST00000555855 THRAP3Q9Y2W1 955 aaKnown RBP28.12■■■□□ 2.09
FOXN3-211ENST00000555855 GCP02774 474 aa28.11■■■□□ 2.09
FOXN3-211ENST00000555855 NBPF14Q5TI25 921 aa28.11■■■□□ 2.09
FOXN3-211ENST00000555855 CPDO75976 1380 aa28.11■■■□□ 2.09
FOXN3-211ENST00000555855 TNS1Q9HBL0 1735 aaKnown RBP28.1■■■□□ 2.09
FOXN3-211ENST00000555855 CABP2Q9NPB3 220 aa28.08■■■□□ 2.09
FOXN3-211ENST00000555855 USP19O94966 1318 aa28.08■■■□□ 2.09
FOXN3-211ENST00000555855 CENPJQ9HC77 1338 aaPredicted RBP28.08■■■□□ 2.09
FOXN3-211ENST00000555855 CAMTA1Q9Y6Y1 1673 aa28.07■■■□□ 2.08
FOXN3-211ENST00000555855 KIAA1210Q9ULL0 1709 aa28.07■■■□□ 2.08
FOXN3-211ENST00000555855 C11orf95C9JLR9 678 aaPredicted RBP28.07■■■□□ 2.08
FOXN3-211ENST00000555855 PPIP5K1Q6PFW1 1433 aa28.06■■■□□ 2.08
FOXN3-211ENST00000555855 TOPAZ1Q8N9V7 1692 aa28.06■■■□□ 2.08
FOXN3-211ENST00000555855 ZBTB7CA1YPR0 619 aa28.05■■■□□ 2.08
FOXN3-211ENST00000555855 BRD4O60885 1362 aaPredicted RBP28.05■■■□□ 2.08
FOXN3-211ENST00000555855 NLRP6P59044 892 aa28.03■■■□□ 2.08
FOXN3-211ENST00000555855 CABP1Q9NZU7 370 aa28.02■■■□□ 2.08
FOXN3-211ENST00000555855 NRKQ7Z2Y5 1582 aa28.02■■■□□ 2.08
FOXN3-211ENST00000555855 LMO7Q8WWI1 1683 aa27.97■■■□□ 2.07
FOXN3-211ENST00000555855 CRB1P82279 1406 aa27.96■■■□□ 2.07
FOXN3-211ENST00000555855 COL5A2P05997 1499 aaPredicted RBP27.95■■■□□ 2.07
FOXN3-211ENST00000555855 TOM1L2Q6ZVM7 507 aa27.95■■■□□ 2.06
FOXN3-211ENST00000555855 DDB1Q16531 1140 aa27.94■■■□□ 2.06
FOXN3-211ENST00000555855 AATKQ6ZMQ8 1374 aa27.94■■■□□ 2.06
FOXN3-211ENST00000555855 PPP1R1BQ9UD71 204 aaPredicted RBP27.93■■■□□ 2.06
FOXN3-211ENST00000555855 EVC2Q86UK5 1308 aa27.92■■■□□ 2.06
FOXN3-211ENST00000555855 USP6P35125 1406 aa27.92■■■□□ 2.06
FOXN3-211ENST00000555855 ZNF692Q9BU19 519 aaPredicted RBP27.92■■■□□ 2.06
FOXN3-211ENST00000555855 SPON1Q9HCB6 807 aa27.92■■■□□ 2.06
FOXN3-211ENST00000555855 OVOS2A0A0G2JMS6 1433 aa27.9■■■□□ 2.06
FOXN3-211ENST00000555855 OVOS2A0A0J9YW53 1432 aa27.9■■■□□ 2.06
FOXN3-211ENST00000555855 OVOS2Q6IE36 1432 aa27.9■■■□□ 2.06
FOXN3-211ENST00000555855 RREB1Q92766 1687 aa27.9■■■□□ 2.06
FOXN3-211ENST00000555855 PARP4Q9UKK3 1724 aaKnown RBP27.89■■■□□ 2.06
FOXN3-211ENST00000555855 DCAF8L1A6NGE4 600 aa27.89■■■□□ 2.06
FOXN3-211ENST00000555855 PLSCR1O15162 318 aa27.89■■■□□ 2.06
FOXN3-211ENST00000555855 KCNQ2O43526 872 aa27.89■■■□□ 2.06
FOXN3-211ENST00000555855 L3MBTL2Q969R5 705 aa27.89■■■□□ 2.06
FOXN3-211ENST00000555855 KCNH5Q8NCM2 988 aa27.88■■■□□ 2.05
FOXN3-211ENST00000555855 CDCA7Q9BWT1 371 aaPredicted RBP27.88■■■□□ 2.05
FOXN3-211ENST00000555855 NUP188Q5SRE5 1749 aa27.87■■■□□ 2.05
FOXN3-211ENST00000555855 BCL11BQ9C0K0 894 aaPredicted RBP27.86■■■□□ 2.05
FOXN3-211ENST00000555855 QRICH2Q9H0J4 1663 aa27.86■■■□□ 2.05
FOXN3-211ENST00000555855 AXIN2Q9Y2T1 843 aa27.85■■■□□ 2.05
FOXN3-211ENST00000555855 WDR17Q8IZU2 1322 aa27.85■■■□□ 2.05
FOXN3-211ENST00000555855 CSB-PGBD3P0DP91 1061 aa27.84■■■□□ 2.05
FOXN3-211ENST00000555855 SLIT3O75094 1523 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms