RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 GLI3P10071 1580 aa21.31■■□□□ 1
EFCAB11-207ENST00000555608 NRAPQ86VF7 1730 aa21.3■■□□□ 1
EFCAB11-207ENST00000555608 SRPK2P78362 688 aaKnown RBP21.3■■□□□ 1
EFCAB11-207ENST00000555608 CABP2Q9NPB3 220 aa21.3■■□□□ 1
EFCAB11-207ENST00000555608 TONSLQ96HA7 1378 aa21.3■■□□□ 1
EFCAB11-207ENST00000555608 PPIP5K1Q6PFW1 1433 aa21.29■■□□□ 1
EFCAB11-207ENST00000555608 ACEP12821 1306 aa21.29■■□□□ 1
EFCAB11-207ENST00000555608 POLR3AO14802 1390 aaPredicted RBP21.28■■□□□ 1
EFCAB11-207ENST00000555608 CCDC61Q9Y6R9 512 aa21.27■■□□□ 1
EFCAB11-207ENST00000555608 COL14A1Q05707 1796 aaKnown RBP21.27■■□□□ 1
EFCAB11-207ENST00000555608 RALGAPBQ86X10 1494 aa21.26■□□□□ 0.99
EFCAB11-207ENST00000555608 UNC5CLQ8IV45 518 aa21.26■□□□□ 0.99
EFCAB11-207ENST00000555608 PLEKHG3A1L390 1219 aa21.24■□□□□ 0.99
EFCAB11-207ENST00000555608 NUTM2GQ5VZR2 741 aa21.24■□□□□ 0.99
EFCAB11-207ENST00000555608 GJD4Q96KN9 370 aaPredicted RBP21.23■□□□□ 0.99
EFCAB11-207ENST00000555608 NRKQ7Z2Y5 1582 aa21.23■□□□□ 0.99
EFCAB11-207ENST00000555608 BRWD3Q6RI45 1802 aa21.22■□□□□ 0.99
EFCAB11-207ENST00000555608 FAM83GA6ND36 823 aa21.21■□□□□ 0.99
EFCAB11-207ENST00000555608 AKAP12Q02952 1782 aa21.2■□□□□ 0.99
EFCAB11-207ENST00000555608 CARD11Q9BXL7 1154 aa21.2■□□□□ 0.98
EFCAB11-207ENST00000555608 EVC2Q86UK5 1308 aa21.2■□□□□ 0.98
EFCAB11-207ENST00000555608 ATAD2Q6PL18 1390 aa21.19■□□□□ 0.98
EFCAB11-207ENST00000555608 CCDC9Q9Y3X0 531 aaKnown RBP21.18■□□□□ 0.98
EFCAB11-207ENST00000555608 BTG4Q9NY30 223 aa21.17■□□□□ 0.98
EFCAB11-207ENST00000555608 CABP1Q9NZU7 370 aa21.17■□□□□ 0.98
EFCAB11-207ENST00000555608 USP6P35125 1406 aa21.17■□□□□ 0.98
EFCAB11-207ENST00000555608 PIK3C2AO00443 1686 aa21.17■□□□□ 0.98
EFCAB11-207ENST00000555608 KIAA0232Q92628 1395 aa21.16■□□□□ 0.98
EFCAB11-207ENST00000555608 VPS72Q15906 364 aa21.16■□□□□ 0.98
EFCAB11-207ENST00000555608 PRDM11Q9NQV5 511 aa21.15■□□□□ 0.98
EFCAB11-207ENST00000555608 ABTB2Q8N961 1025 aa21.14■□□□□ 0.97
EFCAB11-207ENST00000555608 CHRNA2Q15822 529 aa21.13■□□□□ 0.97
EFCAB11-207ENST00000555608 MON2Q7Z3U7 1717 aa21.12■□□□□ 0.97
EFCAB11-207ENST00000555608 SBNO2Q9Y2G9 1366 aa21.12■□□□□ 0.97
EFCAB11-207ENST00000555608 USP19O94966 1318 aa21.12■□□□□ 0.97
EFCAB11-207ENST00000555608 ZC3H6P61129 1189 aaKnown RBP21.12■□□□□ 0.97
EFCAB11-207ENST00000555608 LMO7Q8WWI1 1683 aa21.12■□□□□ 0.97
EFCAB11-207ENST00000555608 EP400Q96L91 3159 aa21.11■□□□□ 0.97
EFCAB11-207ENST00000555608 SEPT12Q8IYM1 358 aa21.1■□□□□ 0.97
EFCAB11-207ENST00000555608 SSH2Q76I76 1423 aa21.1■□□□□ 0.97
EFCAB11-207ENST00000555608 BRD4O60885 1362 aaPredicted RBP21.09■□□□□ 0.97
EFCAB11-207ENST00000555608 SLIT3O75094 1523 aa21.09■□□□□ 0.97
EFCAB11-207ENST00000555608 PCGF6Q9BYE7 350 aa21.08■□□□□ 0.97
EFCAB11-207ENST00000555608 A0A0G2JS52 829 aa21.07■□□□□ 0.96
EFCAB11-207ENST00000555608 MYT1Q01538 1121 aa21.07■□□□□ 0.96
EFCAB11-207ENST00000555608 NLRP13Q86W25 1043 aa21.07■□□□□ 0.96
EFCAB11-207ENST00000555608 THSD7AQ9UPZ6 1657 aa21.07■□□□□ 0.96
EFCAB11-207ENST00000555608 CAMTA1Q9Y6Y1 1673 aa21.06■□□□□ 0.96
EFCAB11-207ENST00000555608 FAM98CQ17RN3 349 aaKnown RBP21.06■□□□□ 0.96
EFCAB11-207ENST00000555608 STRN4Q9NRL3 753 aa21.06■□□□□ 0.96
EFCAB11-207ENST00000555608 CPSF1Q10570 1443 aaKnown RBP21.05■□□□□ 0.96
EFCAB11-207ENST00000555608 SPATA31A5Q5VU36 1347 aa21.04■□□□□ 0.96
EFCAB11-207ENST00000555608 SPATA31A7Q8IWB4 1347 aa21.04■□□□□ 0.96
EFCAB11-207ENST00000555608 ZBTB7CA1YPR0 619 aa21.04■□□□□ 0.96
EFCAB11-207ENST00000555608 NLRP6P59044 892 aa21.04■□□□□ 0.96
EFCAB11-207ENST00000555608 CPDO75976 1380 aa21.04■□□□□ 0.96
EFCAB11-207ENST00000555608 CD163L1Q9NR16 1453 aa21.04■□□□□ 0.96
EFCAB11-207ENST00000555608 TTC21BQ7Z4L5 1316 aa21.04■□□□□ 0.96
EFCAB11-207ENST00000555608 KTN1Q86UP2 1357 aaKnown RBP21.03■□□□□ 0.96
EFCAB11-207ENST00000555608 GCP02774 474 aa21.03■□□□□ 0.96
EFCAB11-207ENST00000555608 ST20-MTHFSA0A0A6YYL1 179 aa21.01■□□□□ 0.95
EFCAB11-207ENST00000555608 ONECUT3O60422 494 aaPredicted RBP21.01■□□□□ 0.95
EFCAB11-207ENST00000555608 COL18A1P39060 1754 aa21■□□□□ 0.95
EFCAB11-207ENST00000555608 KRT27Q7Z3Y8 459 aa21■□□□□ 0.95
EFCAB11-207ENST00000555608 TMC1Q8TDI8 760 aa21■□□□□ 0.95
EFCAB11-207ENST00000555608 ZNF692Q9BU19 519 aaPredicted RBP21■□□□□ 0.95
EFCAB11-207ENST00000555608 SPATA31A1Q5TZJ5 1347 aa21■□□□□ 0.95
EFCAB11-207ENST00000555608 COL5A2P05997 1499 aaPredicted RBP21■□□□□ 0.95
EFCAB11-207ENST00000555608 RGPD5Q99666 1765 aa21■□□□□ 0.95
EFCAB11-207ENST00000555608 USP54Q70EL1 1684 aa20.99■□□□□ 0.95
EFCAB11-207ENST00000555608 TESK2Q96S53 571 aa20.99■□□□□ 0.95
EFCAB11-207ENST00000555608 TTC21AQ8NDW8 1320 aa20.99■□□□□ 0.95
EFCAB11-207ENST00000555608 USP47Q96K76 1375 aa20.98■□□□□ 0.95
EFCAB11-207ENST00000555608 SOX12O15370 315 aa20.98■□□□□ 0.95
EFCAB11-207ENST00000555608 USP35Q9P2H5 1018 aa20.98■□□□□ 0.95
EFCAB11-207ENST00000555608 NFAT5O94916 1531 aa20.98■□□□□ 0.95
EFCAB11-207ENST00000555608 EVA1CP58658 441 aa20.97■□□□□ 0.95
EFCAB11-207ENST00000555608 LARP1Q6PKG0 1096 aaKnown RBP20.97■□□□□ 0.95
EFCAB11-207ENST00000555608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.97■□□□□ 0.95
EFCAB11-207ENST00000555608 SLC12A5Q9H2X9 1139 aa20.97■□□□□ 0.95
EFCAB11-207ENST00000555608 A0A1W2PP64 1363 aa20.97■□□□□ 0.95
EFCAB11-207ENST00000555608 BLMP54132 1417 aaPredicted RBP20.96■□□□□ 0.95
EFCAB11-207ENST00000555608 SRCAPQ6ZRS2 3230 aa20.96■□□□□ 0.95
EFCAB11-207ENST00000555608 CCDC125Q86Z20 511 aa20.96■□□□□ 0.95
EFCAB11-207ENST00000555608 ZRANB1Q9UGI0 708 aa20.96■□□□□ 0.95
EFCAB11-207ENST00000555608 WNK3Q9BYP7 1800 aa20.95■□□□□ 0.94
EFCAB11-207ENST00000555608 FAM182BQ5T319 152 aa20.95■□□□□ 0.94
EFCAB11-207ENST00000555608 CLSPNQ9HAW4 1339 aa20.94■□□□□ 0.94
EFCAB11-207ENST00000555608 LTN1O94822 1766 aa20.94■□□□□ 0.94
EFCAB11-207ENST00000555608 RGPD1P0DJD0 1748 aa20.93■□□□□ 0.94
EFCAB11-207ENST00000555608 HDGFL2Q7Z4V5 671 aaPredicted RBP20.93■□□□□ 0.94
EFCAB11-207ENST00000555608 NME9Q86XW9 330 aa20.93■□□□□ 0.94
EFCAB11-207ENST00000555608 AATKQ6ZMQ8 1374 aa20.93■□□□□ 0.94
EFCAB11-207ENST00000555608 EDC4Q6P2E9 1401 aaKnown RBP20.93■□□□□ 0.94
EFCAB11-207ENST00000555608 TNS1Q9HBL0 1735 aaKnown RBP20.92■□□□□ 0.94
EFCAB11-207ENST00000555608 PARP4Q9UKK3 1724 aaKnown RBP20.92■□□□□ 0.94
EFCAB11-207ENST00000555608 CRB1P82279 1406 aa20.9■□□□□ 0.94
EFCAB11-207ENST00000555608 DEFB132Q7Z7B7 95 aa20.9■□□□□ 0.94
EFCAB11-207ENST00000555608 LRRC37A3O60309 1634 aa20.89■□□□□ 0.94
EFCAB11-207ENST00000555608 USP31Q70CQ4 1352 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms