RNA–Protein interactions for RNA: ENST00000555233.5

PRKCH-214, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-214ENST00000555233 SIRT1Q96EB6 747 aa8.91□□□□□ -0.98
PRKCH-214ENST00000555233 USP54Q70EL1 1684 aa8.91□□□□□ -0.98
PRKCH-214ENST00000555233 ALS2Q96Q42 1657 aa8.91□□□□□ -0.98
PRKCH-214ENST00000555233 HDGFP51858 240 aaKnown RBP8.9□□□□□ -0.98
PRKCH-214ENST00000555233 RBM33Q96EV2 1170 aaKnown RBP8.9□□□□□ -0.98
PRKCH-214ENST00000555233 TESK2Q96S53 571 aa8.9□□□□□ -0.98
PRKCH-214ENST00000555233 KIF1AQ12756 1690 aa8.9□□□□□ -0.98
PRKCH-214ENST00000555233 ROCK2O75116 1388 aaKnown RBP8.89□□□□□ -0.99
PRKCH-214ENST00000555233 PRR36Q9H6K5 1346 aa8.89□□□□□ -0.99
PRKCH-214ENST00000555233 WAPLQ7Z5K2 1190 aa8.89□□□□□ -0.99
PRKCH-214ENST00000555233 CD163L1Q9NR16 1453 aa8.89□□□□□ -0.99
PRKCH-214ENST00000555233 POTEGQ6S5H5 508 aa8.88□□□□□ -0.99
PRKCH-214ENST00000555233 CERKQ8TCT0 537 aa8.88□□□□□ -0.99
PRKCH-214ENST00000555233 USP47Q96K76 1375 aa8.87□□□□□ -0.99
PRKCH-214ENST00000555233 MIER1Q8N108 512 aa8.87□□□□□ -0.99
PRKCH-214ENST00000555233 C1orf167Q5SNV9 1468 aa8.87□□□□□ -0.99
PRKCH-214ENST00000555233 DISP3Q9P2K9 1392 aa8.86□□□□□ -0.99
PRKCH-214ENST00000555233 PXDNQ92626 1479 aa8.86□□□□□ -0.99
PRKCH-214ENST00000555233 PRAM1Q96QH2 718 aa8.86□□□□□ -0.99
PRKCH-214ENST00000555233 COL22A1Q8NFW1 1626 aaPredicted RBP8.86□□□□□ -0.99
PRKCH-214ENST00000555233 ANKARQ7Z5J8 1434 aa8.86□□□□□ -0.99
PRKCH-214ENST00000555233 PIK3C2AO00443 1686 aa8.85□□□□□ -0.99
PRKCH-214ENST00000555233 SHPRHQ149N8 1683 aa8.85□□□□□ -0.99
PRKCH-214ENST00000555233 PLEKHG5O94827 1062 aa8.85□□□□□ -0.99
PRKCH-214ENST00000555233 STK26Q9P289 416 aa8.85□□□□□ -0.99
PRKCH-214ENST00000555233 ZBTB47Q9UFB7 747 aaPredicted RBP8.85□□□□□ -0.99
PRKCH-214ENST00000555233 TRAK1Q9UPV9 953 aa8.85□□□□□ -0.99
PRKCH-214ENST00000555233 PHLPP1O60346 1717 aa8.85□□□□□ -0.99
PRKCH-214ENST00000555233 SOCS7O14512 581 aa8.84□□□□□ -0.99
PRKCH-214ENST00000555233 SSH2Q76I76 1423 aa8.84□□□□□ -0.99
PRKCH-214ENST00000555233 C11orf95C9JLR9 678 aaPredicted RBP8.83□□□□□ -1
PRKCH-214ENST00000555233 PROSER2Q86WR7 435 aaPredicted RBP8.83□□□□□ -1
PRKCH-214ENST00000555233 PHRF1Q9P1Y6 1649 aaKnown RBP8.83□□□□□ -1
PRKCH-214ENST00000555233 ANKRD26Q9UPS8 1709 aa8.83□□□□□ -1
PRKCH-214ENST00000555233 CENPJQ9HC77 1338 aaPredicted RBP8.82□□□□□ -1
PRKCH-214ENST00000555233 MED1Q15648 1581 aaPredicted RBP8.82□□□□□ -1
PRKCH-214ENST00000555233 POTEIP0CG38 1075 aa8.82□□□□□ -1
PRKCH-214ENST00000555233 PRKAR2AP13861 404 aaKnown RBP8.82□□□□□ -1
PRKCH-214ENST00000555233 MSH6P52701 1360 aa8.82□□□□□ -1
PRKCH-214ENST00000555233 CPSF1Q10570 1443 aaKnown RBP8.81□□□□□ -1
PRKCH-214ENST00000555233 ST20-MTHFSA0A0A6YYL1 179 aa8.81□□□□□ -1
PRKCH-214ENST00000555233 CARD11Q9BXL7 1154 aa8.81□□□□□ -1
PRKCH-214ENST00000555233 C19orf44Q9H6X5 657 aa8.81□□□□□ -1
PRKCH-214ENST00000555233 KIF20BQ96Q89 1820 aa8.81□□□□□ -1
PRKCH-214ENST00000555233 POLR3AO14802 1390 aaPredicted RBP8.81□□□□□ -1
PRKCH-214ENST00000555233 MINK1Q8N4C8 1332 aaPredicted RBP8.8□□□□□ -1
PRKCH-214ENST00000555233 ZNF692Q9BU19 519 aaPredicted RBP8.8□□□□□ -1
PRKCH-214ENST00000555233 WASLO00401 505 aaPredicted RBP8.79□□□□□ -1
PRKCH-214ENST00000555233 HSPA5P11021 654 aaKnown RBP8.79□□□□□ -1
PRKCH-214ENST00000555233 SAFB2Q14151 953 aaKnown RBP eCLIP8.79□□□□□ -1
PRKCH-214ENST00000555233 BRINP3Q76B58 766 aa8.79□□□□□ -1
PRKCH-214ENST00000555233 HIRIP3Q9BW71 556 aaPredicted RBP8.79□□□□□ -1
PRKCH-214ENST00000555233 COL18A1P39060 1754 aa8.78□□□□□ -1
PRKCH-214ENST00000555233 EIF3AQ14152 1382 aaKnown RBP8.78□□□□□ -1
PRKCH-214ENST00000555233 ORAI2Q96SN7 254 aa8.78□□□□□ -1
PRKCH-214ENST00000555233 SOS2Q07890 1332 aaPredicted RBP8.77□□□□□ -1.01
PRKCH-214ENST00000555233 LRP6O75581 1613 aa8.76□□□□□ -1.01
PRKCH-214ENST00000555233 SLIT3O75094 1523 aa8.76□□□□□ -1.01
PRKCH-214ENST00000555233 LMO7Q8WWI1 1683 aa8.76□□□□□ -1.01
PRKCH-214ENST00000555233 SLAIN2Q9P270 581 aa8.76□□□□□ -1.01
PRKCH-214ENST00000555233 PPIP5K1Q6PFW1 1433 aa8.76□□□□□ -1.01
PRKCH-214ENST00000555233 NRAPQ86VF7 1730 aa8.76□□□□□ -1.01
PRKCH-214ENST00000555233 RGPD5Q99666 1765 aa8.76□□□□□ -1.01
PRKCH-214ENST00000555233 USP6P35125 1406 aa8.75□□□□□ -1.01
PRKCH-214ENST00000555233 CADPS2Q86UW7 1296 aa8.75□□□□□ -1.01
PRKCH-214ENST00000555233 DDX17Q92841 729 aaKnown RBP8.75□□□□□ -1.01
PRKCH-214ENST00000555233 PUS7Q96PZ0 661 aaKnown RBP8.75□□□□□ -1.01
PRKCH-214ENST00000555233 CDK19Q9BWU1 502 aa8.75□□□□□ -1.01
PRKCH-214ENST00000555233 LTN1O94822 1766 aa8.75□□□□□ -1.01
PRKCH-214ENST00000555233 WASHC2AQ641Q2 1341 aa8.75□□□□□ -1.01
PRKCH-214ENST00000555233 NFAT5O94916 1531 aa8.75□□□□□ -1.01
PRKCH-214ENST00000555233 A0A1W2PP64 1363 aa8.74□□□□□ -1.01
PRKCH-214ENST00000555233 PEAK1Q9H792 1746 aa8.74□□□□□ -1.01
PRKCH-214ENST00000555233 PLEKHG3A1L390 1219 aa8.74□□□□□ -1.01
PRKCH-214ENST00000555233 CABP2Q9NPB3 220 aa8.74□□□□□ -1.01
PRKCH-214ENST00000555233 POGKQ9P215 609 aa8.74□□□□□ -1.01
PRKCH-214ENST00000555233 PLCH1Q4KWH8 1693 aa8.74□□□□□ -1.01
PRKCH-214ENST00000555233 KIF7Q2M1P5 1343 aa8.74□□□□□ -1.01
PRKCH-214ENST00000555233 CCDC7Q96M83 1385 aa8.73□□□□□ -1.01
PRKCH-214ENST00000555233 OVOS2A0A0J9YW53 1432 aa8.73□□□□□ -1.01
PRKCH-214ENST00000555233 OVOS2Q6IE36 1432 aa8.73□□□□□ -1.01
PRKCH-214ENST00000555233 UBAP1LF5GYI3 381 aa8.73□□□□□ -1.01
PRKCH-214ENST00000555233 NUDT16Q96DE0 195 aaKnown RBP8.73□□□□□ -1.01
PRKCH-214ENST00000555233 ATAD2Q6PL18 1390 aa8.73□□□□□ -1.01
PRKCH-214ENST00000555233 PNPLA6Q8IY17 1366 aa8.73□□□□□ -1.01
PRKCH-214ENST00000555233 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.72□□□□□ -1.01
PRKCH-214ENST00000555233 NUTM2FA1L443 756 aa8.72□□□□□ -1.01
PRKCH-214ENST00000555233 GTPBP6O43824 516 aaPredicted RBP8.72□□□□□ -1.01
PRKCH-214ENST00000555233 EIF4G2P78344 907 aaKnown RBP eCLIP8.72□□□□□ -1.01
PRKCH-214ENST00000555233 NKX1-1Q15270 411 aaPredicted RBP8.72□□□□□ -1.01
PRKCH-214ENST00000555233 TNS3Q68CZ2 1445 aa8.71□□□□□ -1.01
PRKCH-214ENST00000555233 MAP2P11137 1827 aaKnown RBP8.71□□□□□ -1.01
PRKCH-214ENST00000555233 WNK3Q9BYP7 1800 aa8.71□□□□□ -1.01
PRKCH-214ENST00000555233 SPDYE2BA6NHP3 402 aa8.71□□□□□ -1.02
PRKCH-214ENST00000555233 SPDYE6P0CI01 402 aa8.71□□□□□ -1.02
PRKCH-214ENST00000555233 HSPA1LP34931 641 aa8.71□□□□□ -1.02
PRKCH-214ENST00000555233 GSE1Q14687 1217 aa8.71□□□□□ -1.02
PRKCH-214ENST00000555233 SPDYE2Q495Y8 402 aa8.71□□□□□ -1.02
PRKCH-214ENST00000555233 RNF25Q96BH1 459 aaPredicted RBP8.71□□□□□ -1.02
PRKCH-214ENST00000555233 OTUD5Q96G74 571 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms