RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 COL14A1Q05707 1796 aaKnown RBP22.61■■□□□ 1.21
NEDD1-207ENST00000555114 HRCP23327 699 aa22.61■■□□□ 1.21
NEDD1-207ENST00000555114 FAM98CQ17RN3 349 aaKnown RBP22.61■■□□□ 1.21
NEDD1-207ENST00000555114 ALS2Q96Q42 1657 aa22.61■■□□□ 1.21
NEDD1-207ENST00000555114 BAG6P46379 1132 aa22.6■■□□□ 1.21
NEDD1-207ENST00000555114 PRDM11Q9NQV5 511 aa22.59■■□□□ 1.21
NEDD1-207ENST00000555114 NRAPQ86VF7 1730 aa22.59■■□□□ 1.21
NEDD1-207ENST00000555114 SRCAPQ6ZRS2 3230 aa22.58■■□□□ 1.2
NEDD1-207ENST00000555114 NUDT16Q96DE0 195 aaKnown RBP22.56■■□□□ 1.2
NEDD1-207ENST00000555114 ITSN1Q15811 1721 aa22.56■■□□□ 1.2
NEDD1-207ENST00000555114 SPATA31A5Q5VU36 1347 aa22.56■■□□□ 1.2
NEDD1-207ENST00000555114 SPATA31A7Q8IWB4 1347 aa22.56■■□□□ 1.2
NEDD1-207ENST00000555114 ATP7BP35670 1465 aa22.54■■□□□ 1.2
NEDD1-207ENST00000555114 ARHGEF28Q8N1W1 1705 aaKnown RBP22.53■■□□□ 1.2
NEDD1-207ENST00000555114 CDK19Q9BWU1 502 aa22.51■■□□□ 1.19
NEDD1-207ENST00000555114 KIAA0232Q92628 1395 aa22.5■■□□□ 1.19
NEDD1-207ENST00000555114 CRYBG1Q9Y4K1 1723 aa22.49■■□□□ 1.19
NEDD1-207ENST00000555114 CCDC61Q9Y6R9 512 aa22.49■■□□□ 1.19
NEDD1-207ENST00000555114 STRN4Q9NRL3 753 aa22.47■■□□□ 1.19
NEDD1-207ENST00000555114 RGPD1P0DJD0 1748 aa22.47■■□□□ 1.19
NEDD1-207ENST00000555114 SPATA31A1Q5TZJ5 1347 aa22.47■■□□□ 1.19
NEDD1-207ENST00000555114 POLR3AO14802 1390 aaPredicted RBP22.47■■□□□ 1.19
NEDD1-207ENST00000555114 CHRNA2Q15822 529 aa22.46■■□□□ 1.19
NEDD1-207ENST00000555114 ACEP12821 1306 aa22.46■■□□□ 1.19
NEDD1-207ENST00000555114 THSD7AQ9UPZ6 1657 aa22.46■■□□□ 1.19
NEDD1-207ENST00000555114 EVA1CP58658 441 aa22.45■■□□□ 1.18
NEDD1-207ENST00000555114 ZC3H6P61129 1189 aaKnown RBP22.45■■□□□ 1.18
NEDD1-207ENST00000555114 EN1Q05925 392 aaPredicted RBP22.45■■□□□ 1.18
NEDD1-207ENST00000555114 NBPF8Q3BBV2 869 aa22.45■■□□□ 1.18
NEDD1-207ENST00000555114 LRP5O75197 1615 aa22.45■■□□□ 1.18
NEDD1-207ENST00000555114 PLEKHG3A1L390 1219 aa22.44■■□□□ 1.18
NEDD1-207ENST00000555114 PSDA5PKW4 1024 aaPredicted RBP22.44■■□□□ 1.18
NEDD1-207ENST00000555114 FAM182BQ5T319 152 aa22.44■■□□□ 1.18
NEDD1-207ENST00000555114 NUTM2GQ5VZR2 741 aa22.44■■□□□ 1.18
NEDD1-207ENST00000555114 KIAA1210Q9ULL0 1709 aa22.44■■□□□ 1.18
NEDD1-207ENST00000555114 PHRF1Q9P1Y6 1649 aaKnown RBP22.43■■□□□ 1.18
NEDD1-207ENST00000555114 FAM196AQ6ZSG2 479 aa22.43■■□□□ 1.18
NEDD1-207ENST00000555114 ABTB2Q8N961 1025 aa22.43■■□□□ 1.18
NEDD1-207ENST00000555114 DISP2A7MBM2 1401 aa22.42■■□□□ 1.18
NEDD1-207ENST00000555114 SRPK2P78362 688 aaKnown RBP22.41■■□□□ 1.18
NEDD1-207ENST00000555114 TOPAZ1Q8N9V7 1692 aa22.41■■□□□ 1.18
NEDD1-207ENST00000555114 USP35Q9P2H5 1018 aa22.4■■□□□ 1.18
NEDD1-207ENST00000555114 PDE3BQ13370 1112 aa22.39■■□□□ 1.17
NEDD1-207ENST00000555114 BARGINQ6ZT62 677 aa22.39■■□□□ 1.17
NEDD1-207ENST00000555114 NLRP13Q86W25 1043 aa22.39■■□□□ 1.17
NEDD1-207ENST00000555114 SSH2Q76I76 1423 aa22.39■■□□□ 1.17
NEDD1-207ENST00000555114 CENPJQ9HC77 1338 aaPredicted RBP22.38■■□□□ 1.17
NEDD1-207ENST00000555114 CPDO75976 1380 aa22.38■■□□□ 1.17
NEDD1-207ENST00000555114 TRIM37O94972 964 aa22.37■■□□□ 1.17
NEDD1-207ENST00000555114 PPIP5K1Q6PFW1 1433 aa22.37■■□□□ 1.17
NEDD1-207ENST00000555114 BRD4O60885 1362 aaPredicted RBP22.37■■□□□ 1.17
NEDD1-207ENST00000555114 PARD3Q8TEW0 1356 aa22.37■■□□□ 1.17
NEDD1-207ENST00000555114 NBPF1Q3BBV0 1214 aa22.36■■□□□ 1.17
NEDD1-207ENST00000555114 NRKQ7Z2Y5 1582 aa22.36■■□□□ 1.17
NEDD1-207ENST00000555114 USP19O94966 1318 aa22.35■■□□□ 1.17
NEDD1-207ENST00000555114 R3HDM1Q15032 1099 aaKnown RBP22.35■■□□□ 1.17
NEDD1-207ENST00000555114 EZH2Q15910 746 aaKnown RBP22.35■■□□□ 1.17
NEDD1-207ENST00000555114 TCP11L2Q8N4U5 519 aa22.35■■□□□ 1.17
NEDD1-207ENST00000555114 THRAP3Q9Y2W1 955 aaKnown RBP22.35■■□□□ 1.17
NEDD1-207ENST00000555114 TNS1Q9HBL0 1735 aaKnown RBP22.34■■□□□ 1.17
NEDD1-207ENST00000555114 APBA3O96018 575 aa22.34■■□□□ 1.17
NEDD1-207ENST00000555114 GCP02774 474 aa22.33■■□□□ 1.17
NEDD1-207ENST00000555114 LARP1Q6PKG0 1096 aaKnown RBP22.33■■□□□ 1.17
NEDD1-207ENST00000555114 CAMKK2Q96RR4 588 aa22.32■■□□□ 1.16
NEDD1-207ENST00000555114 CABP2Q9NPB3 220 aa22.32■■□□□ 1.16
NEDD1-207ENST00000555114 CAMTA1Q9Y6Y1 1673 aa22.31■■□□□ 1.16
NEDD1-207ENST00000555114 C11orf95C9JLR9 678 aaPredicted RBP22.31■■□□□ 1.16
NEDD1-207ENST00000555114 LMO7Q8WWI1 1683 aa22.29■■□□□ 1.16
NEDD1-207ENST00000555114 NLRP6P59044 892 aa22.27■■□□□ 1.16
NEDD1-207ENST00000555114 NBPF14Q5TI25 921 aa22.27■■□□□ 1.16
NEDD1-207ENST00000555114 CABP1Q9NZU7 370 aa22.27■■□□□ 1.16
NEDD1-207ENST00000555114 COL5A2P05997 1499 aaPredicted RBP22.27■■□□□ 1.16
NEDD1-207ENST00000555114 QRICH2Q9H0J4 1663 aa22.26■■□□□ 1.15
NEDD1-207ENST00000555114 USP6P35125 1406 aa22.26■■□□□ 1.15
NEDD1-207ENST00000555114 ZBTB7CA1YPR0 619 aa22.26■■□□□ 1.15
NEDD1-207ENST00000555114 EVC2Q86UK5 1308 aa22.26■■□□□ 1.15
NEDD1-207ENST00000555114 CRB1P82279 1406 aa22.25■■□□□ 1.15
NEDD1-207ENST00000555114 AATKQ6ZMQ8 1374 aa22.24■■□□□ 1.15
NEDD1-207ENST00000555114 PARP4Q9UKK3 1724 aaKnown RBP22.21■■□□□ 1.15
NEDD1-207ENST00000555114 L3MBTL2Q969R5 705 aa22.21■■□□□ 1.15
NEDD1-207ENST00000555114 OVOS2A0A0G2JMS6 1433 aa22.21■■□□□ 1.15
NEDD1-207ENST00000555114 OVOS2A0A0J9YW53 1432 aa22.21■■□□□ 1.15
NEDD1-207ENST00000555114 OVOS2Q6IE36 1432 aa22.21■■□□□ 1.15
NEDD1-207ENST00000555114 SLIT3O75094 1523 aa22.21■■□□□ 1.15
NEDD1-207ENST00000555114 TOM1L2Q6ZVM7 507 aa22.2■■□□□ 1.14
NEDD1-207ENST00000555114 ZNF692Q9BU19 519 aaPredicted RBP22.2■■□□□ 1.14
NEDD1-207ENST00000555114 DDB1Q16531 1140 aa22.19■■□□□ 1.14
NEDD1-207ENST00000555114 RREB1Q92766 1687 aa22.19■■□□□ 1.14
NEDD1-207ENST00000555114 ROCK2O75116 1388 aaKnown RBP22.18■■□□□ 1.14
NEDD1-207ENST00000555114 KCNH5Q8NCM2 988 aa22.18■■□□□ 1.14
NEDD1-207ENST00000555114 CDCA7Q9BWT1 371 aaPredicted RBP22.17■■□□□ 1.14
NEDD1-207ENST00000555114 TRPM1Q7Z4N2 1603 aa22.16■■□□□ 1.14
NEDD1-207ENST00000555114 NUP188Q5SRE5 1749 aa22.15■■□□□ 1.14
NEDD1-207ENST00000555114 WDR17Q8IZU2 1322 aa22.15■■□□□ 1.14
NEDD1-207ENST00000555114 TTC21AQ8NDW8 1320 aa22.15■■□□□ 1.14
NEDD1-207ENST00000555114 CPSF1Q10570 1443 aaKnown RBP22.14■■□□□ 1.14
NEDD1-207ENST00000555114 TTC21BQ7Z4L5 1316 aa22.14■■□□□ 1.14
NEDD1-207ENST00000555114 PIK3C2AO00443 1686 aa22.14■■□□□ 1.13
NEDD1-207ENST00000555114 CSB-PGBD3P0DP91 1061 aa22.13■■□□□ 1.13
NEDD1-207ENST00000555114 PLSCR1O15162 318 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms