RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 NCOA3Q9Y6Q9 1424 aa14.63□□□□□ -0.07
GABRB3-208ENST00000555094 TMEM94Q12767 1356 aa14.63□□□□□ -0.07
GABRB3-208ENST00000555094 ZNF692Q9BU19 519 aaPredicted RBP14.63□□□□□ -0.07
GABRB3-208ENST00000555094 DCCP43146 1447 aa14.63□□□□□ -0.07
GABRB3-208ENST00000555094 KIF1AQ12756 1690 aa14.62□□□□□ -0.07
GABRB3-208ENST00000555094 INSRP06213 1382 aa14.62□□□□□ -0.07
GABRB3-208ENST00000555094 MARF1Q9Y4F3 1742 aaKnown RBP14.62□□□□□ -0.07
GABRB3-208ENST00000555094 BLMP54132 1417 aaPredicted RBP14.62□□□□□ -0.07
GABRB3-208ENST00000555094 HNRNPUQ00839 825 aaKnown RBP eCLIP14.61□□□□□ -0.07
GABRB3-208ENST00000555094 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.61□□□□□ -0.07
GABRB3-208ENST00000555094 OVOS2A0A0J9YW53 1432 aa14.6□□□□□ -0.07
GABRB3-208ENST00000555094 OVOS2Q6IE36 1432 aa14.6□□□□□ -0.07
GABRB3-208ENST00000555094 COL3A1P02461 1466 aaPredicted RBP14.6□□□□□ -0.07
GABRB3-208ENST00000555094 TNNT2P45379 298 aaPredicted RBP14.6□□□□□ -0.07
GABRB3-208ENST00000555094 C14orf37Q86TY3 774 aa14.6□□□□□ -0.07
GABRB3-208ENST00000555094 NME9Q86XW9 330 aa14.6□□□□□ -0.07
GABRB3-208ENST00000555094 LRRC7Q96NW7 1537 aa14.6□□□□□ -0.07
GABRB3-208ENST00000555094 TTC21BQ7Z4L5 1316 aa14.6□□□□□ -0.07
GABRB3-208ENST00000555094 PMFBP1Q8TBY8 1022 aa14.59□□□□□ -0.07
GABRB3-208ENST00000555094 SMG6Q86US8 1419 aaKnown RBP14.59□□□□□ -0.07
GABRB3-208ENST00000555094 C1orf167Q5SNV9 1468 aa14.59□□□□□ -0.07
GABRB3-208ENST00000555094 MAP2P11137 1827 aaKnown RBP14.58□□□□□ -0.07
GABRB3-208ENST00000555094 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
GABRB3-208ENST00000555094 MST1RQ04912 1400 aa14.58□□□□□ -0.08
GABRB3-208ENST00000555094 TRPM3Q9HCF6 1732 aaPredicted RBP14.57□□□□□ -0.08
GABRB3-208ENST00000555094 NGDNQ8NEJ9 315 aaKnown RBP14.57□□□□□ -0.08
GABRB3-208ENST00000555094 FBXO41Q8TF61 875 aa14.57□□□□□ -0.08
GABRB3-208ENST00000555094 C19orf44Q9H6X5 657 aa14.57□□□□□ -0.08
GABRB3-208ENST00000555094 ZRANB1Q9UGI0 708 aa14.57□□□□□ -0.08
GABRB3-208ENST00000555094 PHF8Q9UPP1 1060 aa14.57□□□□□ -0.08
GABRB3-208ENST00000555094 TTC21AQ8NDW8 1320 aa14.56□□□□□ -0.08
GABRB3-208ENST00000555094 ZNF335Q9H4Z2 1342 aaPredicted RBP14.56□□□□□ -0.08
GABRB3-208ENST00000555094 MTHFSP49914 203 aa14.56□□□□□ -0.08
GABRB3-208ENST00000555094 ZBED9Q6R2W3 1325 aa14.56□□□□□ -0.08
GABRB3-208ENST00000555094 AATKQ6ZMQ8 1374 aa14.55□□□□□ -0.08
GABRB3-208ENST00000555094 CDK12Q9NYV4 1490 aaPredicted RBP14.55□□□□□ -0.08
GABRB3-208ENST00000555094 USP31Q70CQ4 1352 aa14.54□□□□□ -0.08
GABRB3-208ENST00000555094 WDR43Q15061 677 aaKnown RBP eCLIP14.54□□□□□ -0.08
GABRB3-208ENST00000555094 COG3Q96JB2 828 aa14.54□□□□□ -0.08
GABRB3-208ENST00000555094 MSH6P52701 1360 aa14.53□□□□□ -0.08
GABRB3-208ENST00000555094 ZBTB22O15209 634 aa14.53□□□□□ -0.08
GABRB3-208ENST00000555094 PEAK1Q9H792 1746 aa14.53□□□□□ -0.08
GABRB3-208ENST00000555094 PNPLA6Q8IY17 1366 aa14.52□□□□□ -0.08
GABRB3-208ENST00000555094 CFAP53Q96M91 514 aa14.52□□□□□ -0.08
GABRB3-208ENST00000555094 ADAMTS8Q9UP79 889 aa14.52□□□□□ -0.08
GABRB3-208ENST00000555094 ESCO1Q5FWF5 840 aa14.51□□□□□ -0.09
GABRB3-208ENST00000555094 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
GABRB3-208ENST00000555094 ALS2Q96Q42 1657 aa14.51□□□□□ -0.09
GABRB3-208ENST00000555094 ATF3P18847 181 aa14.5□□□□□ -0.09
GABRB3-208ENST00000555094 ORAI2Q96SN7 254 aa14.5□□□□□ -0.09
GABRB3-208ENST00000555094 POLKQ9UBT6 870 aa14.5□□□□□ -0.09
GABRB3-208ENST00000555094 IQSEC2Q5JU85 1478 aa14.49□□□□□ -0.09
GABRB3-208ENST00000555094 CADPS2Q86UW7 1296 aa14.49□□□□□ -0.09
GABRB3-208ENST00000555094 LTBP4Q8N2S1 1624 aa14.48□□□□□ -0.09
GABRB3-208ENST00000555094 FBLN1P23142 703 aa14.48□□□□□ -0.09
GABRB3-208ENST00000555094 EMILIN1Q9Y6C2 1016 aa14.48□□□□□ -0.09
GABRB3-208ENST00000555094 NFAT5O94916 1531 aa14.48□□□□□ -0.09
GABRB3-208ENST00000555094 LTN1O94822 1766 aa14.47□□□□□ -0.09
GABRB3-208ENST00000555094 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
GABRB3-208ENST00000555094 SLIT3O75094 1523 aa14.46□□□□□ -0.09
GABRB3-208ENST00000555094 PHRF1Q9P1Y6 1649 aaKnown RBP14.46□□□□□ -0.09
GABRB3-208ENST00000555094 SENP3-EIF4A1A0A087X0R7 540 aa14.45□□□□□ -0.1
GABRB3-208ENST00000555094 RGPD1P0DJD0 1748 aa14.45□□□□□ -0.1
GABRB3-208ENST00000555094 PXDNQ92626 1479 aa14.45□□□□□ -0.1
GABRB3-208ENST00000555094 PSME1Q06323 249 aa14.44□□□□□ -0.1
GABRB3-208ENST00000555094 RRS1Q15050 365 aaKnown RBP14.44□□□□□ -0.1
GABRB3-208ENST00000555094 CRYBG1Q9Y4K1 1723 aa14.44□□□□□ -0.1
GABRB3-208ENST00000555094 FOXO3O43524 673 aa14.44□□□□□ -0.1
GABRB3-208ENST00000555094 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
GABRB3-208ENST00000555094 CCDC146Q8IYE0 955 aa14.44□□□□□ -0.1
GABRB3-208ENST00000555094 NHSL1Q5SYE7 1610 aa14.43□□□□□ -0.1
GABRB3-208ENST00000555094 DIAPH1O60610 1272 aaKnown RBP14.43□□□□□ -0.1
GABRB3-208ENST00000555094 NLRP6P59044 892 aa14.43□□□□□ -0.1
GABRB3-208ENST00000555094 ABTB2Q8N961 1025 aa14.43□□□□□ -0.1
GABRB3-208ENST00000555094 PPM1GO15355 546 aaPredicted RBP14.42□□□□□ -0.1
GABRB3-208ENST00000555094 XPCQ01831 940 aaPredicted RBP14.42□□□□□ -0.1
GABRB3-208ENST00000555094 NUTM2GQ5VZR2 741 aa14.42□□□□□ -0.1
GABRB3-208ENST00000555094 MED1Q15648 1581 aaPredicted RBP14.42□□□□□ -0.1
GABRB3-208ENST00000555094 MAP3K19Q56UN5 1328 aa14.41□□□□□ -0.1
GABRB3-208ENST00000555094 SBNO1A3KN83 1393 aa14.41□□□□□ -0.1
GABRB3-208ENST00000555094 KRT28Q7Z3Y7 464 aa14.41□□□□□ -0.1
GABRB3-208ENST00000555094 NUDCQ9Y266 331 aa14.41□□□□□ -0.1
GABRB3-208ENST00000555094 USP19O94966 1318 aa14.41□□□□□ -0.1
GABRB3-208ENST00000555094 FLT4P35916 1363 aa14.4□□□□□ -0.1
GABRB3-208ENST00000555094 U2AF1L5P0DN76 240 aaPredicted RBP14.4□□□□□ -0.1
GABRB3-208ENST00000555094 U2AF1Q01081 240 aaKnown RBP eCLIP14.4□□□□□ -0.1
GABRB3-208ENST00000555094 TNS3Q68CZ2 1445 aa14.4□□□□□ -0.1
GABRB3-208ENST00000555094 NPHP3Q7Z494 1330 aa14.4□□□□□ -0.1
GABRB3-208ENST00000555094 RTL1A6NKG5 1358 aa14.4□□□□□ -0.1
GABRB3-208ENST00000555094 KIF24Q5T7B8 1368 aa14.4□□□□□ -0.1
GABRB3-208ENST00000555094 U2SURPO15042 1029 aaKnown RBP14.39□□□□□ -0.11
GABRB3-208ENST00000555094 SOX12O15370 315 aa14.39□□□□□ -0.11
GABRB3-208ENST00000555094 IL13P35225 146 aa14.39□□□□□ -0.11
GABRB3-208ENST00000555094 BRINP3Q76B58 766 aa14.39□□□□□ -0.11
GABRB3-208ENST00000555094 RUNDC1Q96C34 613 aa14.39□□□□□ -0.11
GABRB3-208ENST00000555094 ZNF521Q96K83 1311 aa14.39□□□□□ -0.11
GABRB3-208ENST00000555094 APAF1O14727 1248 aa14.38□□□□□ -0.11
GABRB3-208ENST00000555094 SALL2Q9Y467 1007 aaPredicted RBP14.38□□□□□ -0.11
GABRB3-208ENST00000555094 ABCA3Q99758 1704 aa14.38□□□□□ -0.11
GABRB3-208ENST00000555094 DDX17Q92841 729 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms