RNA–Protein interactions for RNA: ENST00000554991.5

STRN3-205, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-205ENST00000554991 SRPK2P78362 688 aaKnown RBP12.19□□□□□ -0.46
STRN3-205ENST00000554991 NUDT16Q96DE0 195 aaKnown RBP12.19□□□□□ -0.46
STRN3-205ENST00000554991 USP21Q9UK80 565 aa12.19□□□□□ -0.46
STRN3-205ENST00000554991 SLIT2O94813 1529 aa12.19□□□□□ -0.46
STRN3-205ENST00000554991 USP54Q70EL1 1684 aa12.19□□□□□ -0.46
STRN3-205ENST00000554991 RGPD5Q99666 1765 aa12.18□□□□□ -0.46
STRN3-205ENST00000554991 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
STRN3-205ENST00000554991 CDK19Q9BWU1 502 aa12.18□□□□□ -0.46
STRN3-205ENST00000554991 POLR3AO14802 1390 aaPredicted RBP12.18□□□□□ -0.46
STRN3-205ENST00000554991 KIF20BQ96Q89 1820 aa12.17□□□□□ -0.46
STRN3-205ENST00000554991 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
STRN3-205ENST00000554991 TRPC5Q9UL62 973 aaPredicted RBP12.17□□□□□ -0.46
STRN3-205ENST00000554991 EVC2Q86UK5 1308 aa12.16□□□□□ -0.46
STRN3-205ENST00000554991 BCL9LQ86UU0 1499 aa12.16□□□□□ -0.46
STRN3-205ENST00000554991 LMO7Q8WWI1 1683 aa12.16□□□□□ -0.46
STRN3-205ENST00000554991 CABLES1Q8TDN4 633 aa12.15□□□□□ -0.46
STRN3-205ENST00000554991 CARD11Q9BXL7 1154 aa12.15□□□□□ -0.46
STRN3-205ENST00000554991 QTRT2Q9H974 415 aaKnown RBP12.15□□□□□ -0.46
STRN3-205ENST00000554991 RGPD1P0DJD0 1748 aa12.14□□□□□ -0.47
STRN3-205ENST00000554991 ACEP12821 1306 aa12.14□□□□□ -0.47
STRN3-205ENST00000554991 FNBP4Q8N3X1 1017 aaPredicted RBP12.14□□□□□ -0.47
STRN3-205ENST00000554991 CABP2Q9NPB3 220 aa12.14□□□□□ -0.47
STRN3-205ENST00000554991 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
STRN3-205ENST00000554991 SBNO2Q9Y2G9 1366 aa12.14□□□□□ -0.47
STRN3-205ENST00000554991 MYOM1P52179 1685 aa12.13□□□□□ -0.47
STRN3-205ENST00000554991 USP6P35125 1406 aa12.13□□□□□ -0.47
STRN3-205ENST00000554991 NBPF8Q3BBV2 869 aa12.13□□□□□ -0.47
STRN3-205ENST00000554991 ATAD2Q6PL18 1390 aa12.13□□□□□ -0.47
STRN3-205ENST00000554991 THSD7AQ9UPZ6 1657 aa12.13□□□□□ -0.47
STRN3-205ENST00000554991 SLIT3O75094 1523 aa12.12□□□□□ -0.47
STRN3-205ENST00000554991 BRD4O60885 1362 aaPredicted RBP12.11□□□□□ -0.47
STRN3-205ENST00000554991 CCDC9Q9Y3X0 531 aaKnown RBP12.11□□□□□ -0.47
STRN3-205ENST00000554991 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
STRN3-205ENST00000554991 PLEKHG3A1L390 1219 aa12.1□□□□□ -0.47
STRN3-205ENST00000554991 UNC5CLQ8IV45 518 aa12.1□□□□□ -0.47
STRN3-205ENST00000554991 PARP4Q9UKK3 1724 aaKnown RBP12.1□□□□□ -0.47
STRN3-205ENST00000554991 COL18A1P39060 1754 aa12.1□□□□□ -0.47
STRN3-205ENST00000554991 TNS1Q9HBL0 1735 aaKnown RBP12.09□□□□□ -0.47
STRN3-205ENST00000554991 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
STRN3-205ENST00000554991 PRDM11Q9NQV5 511 aa12.09□□□□□ -0.47
STRN3-205ENST00000554991 KIAA0232Q92628 1395 aa12.08□□□□□ -0.48
STRN3-205ENST00000554991 NUTM2GQ5VZR2 741 aa12.08□□□□□ -0.48
STRN3-205ENST00000554991 CLSPNQ9HAW4 1339 aa12.08□□□□□ -0.48
STRN3-205ENST00000554991 ABTB2Q8N961 1025 aa12.07□□□□□ -0.48
STRN3-205ENST00000554991 GJD4Q96KN9 370 aaPredicted RBP12.07□□□□□ -0.48
STRN3-205ENST00000554991 LRRC37A3O60309 1634 aa12.07□□□□□ -0.48
STRN3-205ENST00000554991 ABCC6O95255 1503 aa12.06□□□□□ -0.48
STRN3-205ENST00000554991 KTN1Q86UP2 1357 aaKnown RBP12.06□□□□□ -0.48
STRN3-205ENST00000554991 USP47Q96K76 1375 aa12.06□□□□□ -0.48
STRN3-205ENST00000554991 ANKRD26Q9UPS8 1709 aa12.06□□□□□ -0.48
STRN3-205ENST00000554991 A0A0G2JS52 829 aa12.06□□□□□ -0.48
STRN3-205ENST00000554991 MYT1Q01538 1121 aa12.06□□□□□ -0.48
STRN3-205ENST00000554991 BTG4Q9NY30 223 aa12.06□□□□□ -0.48
STRN3-205ENST00000554991 CABP1Q9NZU7 370 aa12.06□□□□□ -0.48
STRN3-205ENST00000554991 USP19O94966 1318 aa12.06□□□□□ -0.48
STRN3-205ENST00000554991 NFAT5O94916 1531 aa12.06□□□□□ -0.48
STRN3-205ENST00000554991 VPS72Q15906 364 aa12.05□□□□□ -0.48
STRN3-205ENST00000554991 EP400Q96L91 3159 aa12.05□□□□□ -0.48
STRN3-205ENST00000554991 SBF2Q86WG5 1849 aa12.04□□□□□ -0.48
STRN3-205ENST00000554991 SSH2Q76I76 1423 aa12.04□□□□□ -0.48
STRN3-205ENST00000554991 CAMTA1Q9Y6Y1 1673 aa12.04□□□□□ -0.48
STRN3-205ENST00000554991 NLRP13Q86W25 1043 aa12.04□□□□□ -0.48
STRN3-205ENST00000554991 UPF1Q92900 1129 aaKnown RBP eCLIP12.04□□□□□ -0.48
STRN3-205ENST00000554991 CPDO75976 1380 aa12.04□□□□□ -0.48
STRN3-205ENST00000554991 CPSF1Q10570 1443 aaKnown RBP12.03□□□□□ -0.48
STRN3-205ENST00000554991 COL5A2P05997 1499 aaPredicted RBP12.03□□□□□ -0.48
STRN3-205ENST00000554991 CD163L1Q9NR16 1453 aa12.03□□□□□ -0.48
STRN3-205ENST00000554991 ZBTB7CA1YPR0 619 aa12.03□□□□□ -0.48
STRN3-205ENST00000554991 FAM83GA6ND36 823 aa12.03□□□□□ -0.48
STRN3-205ENST00000554991 ZC3H6P61129 1189 aaKnown RBP12.03□□□□□ -0.48
STRN3-205ENST00000554991 CHRNA2Q15822 529 aa12.03□□□□□ -0.48
STRN3-205ENST00000554991 TTC21AQ8NDW8 1320 aa12.03□□□□□ -0.48
STRN3-205ENST00000554991 NINLQ9Y2I6 1382 aa12.03□□□□□ -0.48
STRN3-205ENST00000554991 EDC4Q6P2E9 1401 aaKnown RBP12.03□□□□□ -0.48
STRN3-205ENST00000554991 CCER1Q8TC90 406 aaPredicted RBP12.02□□□□□ -0.49
STRN3-205ENST00000554991 TMC1Q8TDI8 760 aa12.02□□□□□ -0.49
STRN3-205ENST00000554991 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.49
STRN3-205ENST00000554991 NLRP6P59044 892 aa12.01□□□□□ -0.49
STRN3-205ENST00000554991 HDGFL2Q7Z4V5 671 aaPredicted RBP12.01□□□□□ -0.49
STRN3-205ENST00000554991 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
STRN3-205ENST00000554991 STRN4Q9NRL3 753 aa12.01□□□□□ -0.49
STRN3-205ENST00000554991 A0A1W2PP64 1363 aa12.01□□□□□ -0.49
STRN3-205ENST00000554991 TTC21BQ7Z4L5 1316 aa12□□□□□ -0.49
STRN3-205ENST00000554991 ST20-MTHFSA0A0A6YYL1 179 aa11.99□□□□□ -0.49
STRN3-205ENST00000554991 FAM98CQ17RN3 349 aaKnown RBP11.99□□□□□ -0.49
STRN3-205ENST00000554991 SEPT12Q8IYM1 358 aa11.99□□□□□ -0.49
STRN3-205ENST00000554991 TIMELESSQ9UNS1 1208 aa11.99□□□□□ -0.49
STRN3-205ENST00000554991 SPATA31A5Q5VU36 1347 aa11.99□□□□□ -0.49
STRN3-205ENST00000554991 SPATA31A7Q8IWB4 1347 aa11.99□□□□□ -0.49
STRN3-205ENST00000554991 BLMP54132 1417 aaPredicted RBP11.99□□□□□ -0.49
STRN3-205ENST00000554991 RREB1Q92766 1687 aa11.99□□□□□ -0.49
STRN3-205ENST00000554991 RGPD3A6NKT7 1758 aaPredicted RBP11.98□□□□□ -0.49
STRN3-205ENST00000554991 RGPD4Q7Z3J3 1758 aa11.98□□□□□ -0.49
STRN3-205ENST00000554991 CRB1P82279 1406 aa11.98□□□□□ -0.49
STRN3-205ENST00000554991 SOX12O15370 315 aa11.98□□□□□ -0.49
STRN3-205ENST00000554991 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
STRN3-205ENST00000554991 GCP02774 474 aa11.98□□□□□ -0.49
STRN3-205ENST00000554991 TERF2IPQ9NYB0 399 aa11.98□□□□□ -0.49
STRN3-205ENST00000554991 KAT6BQ8WYB5 2073 aa11.98□□□□□ -0.49
STRN3-205ENST00000554991 MAP2P11137 1827 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms