RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 WASLO00401 505 aaPredicted RBP22.1■■□□□ 1.13
XRCC3-210ENST00000554974 KRT27Q7Z3Y8 459 aa22.1■■□□□ 1.13
XRCC3-210ENST00000554974 BTG4Q9NY30 223 aa22.1■■□□□ 1.13
XRCC3-210ENST00000554974 ATP7BP35670 1465 aa22.09■■□□□ 1.13
XRCC3-210ENST00000554974 SF3B2Q13435 895 aaKnown RBP22.08■■□□□ 1.13
XRCC3-210ENST00000554974 FAM98CQ17RN3 349 aaKnown RBP22.08■■□□□ 1.13
XRCC3-210ENST00000554974 PHRF1Q9P1Y6 1649 aaKnown RBP22.07■■□□□ 1.12
XRCC3-210ENST00000554974 NGDNQ8NEJ9 315 aaKnown RBP22.07■■□□□ 1.12
XRCC3-210ENST00000554974 PAK3O75914 559 aaPredicted RBP22.06■■□□□ 1.12
XRCC3-210ENST00000554974 TOPAZ1Q8N9V7 1692 aa22.05■■□□□ 1.12
XRCC3-210ENST00000554974 THSD7AQ9UPZ6 1657 aa22.05■■□□□ 1.12
XRCC3-210ENST00000554974 RGPD1P0DJD0 1748 aa22.03■■□□□ 1.12
XRCC3-210ENST00000554974 FAM182BQ5T319 152 aa22.01■■□□□ 1.11
XRCC3-210ENST00000554974 PRDM11Q9NQV5 511 aa22.01■■□□□ 1.11
XRCC3-210ENST00000554974 SPATA31A5Q5VU36 1347 aa22.01■■□□□ 1.11
XRCC3-210ENST00000554974 SPATA31A7Q8IWB4 1347 aa22.01■■□□□ 1.11
XRCC3-210ENST00000554974 TNS1Q9HBL0 1735 aaKnown RBP22■■□□□ 1.11
XRCC3-210ENST00000554974 LRP5O75197 1615 aa22■■□□□ 1.11
XRCC3-210ENST00000554974 NUDT16Q96DE0 195 aaKnown RBP22■■□□□ 1.11
XRCC3-210ENST00000554974 KIAA0232Q92628 1395 aa21.99■■□□□ 1.11
XRCC3-210ENST00000554974 STAC3Q96MF2 364 aa21.99■■□□□ 1.11
XRCC3-210ENST00000554974 KIAA1210Q9ULL0 1709 aa21.99■■□□□ 1.11
XRCC3-210ENST00000554974 BAG6P46379 1132 aa21.97■■□□□ 1.11
XRCC3-210ENST00000554974 CHRNA2Q15822 529 aa21.97■■□□□ 1.11
XRCC3-210ENST00000554974 NUTM2GQ5VZR2 741 aa21.97■■□□□ 1.11
XRCC3-210ENST00000554974 NRKQ7Z2Y5 1582 aa21.96■■□□□ 1.11
XRCC3-210ENST00000554974 PSDA5PKW4 1024 aaPredicted RBP21.96■■□□□ 1.11
XRCC3-210ENST00000554974 CDK19Q9BWU1 502 aa21.96■■□□□ 1.11
XRCC3-210ENST00000554974 POLR3AO14802 1390 aaPredicted RBP21.94■■□□□ 1.1
XRCC3-210ENST00000554974 ACEP12821 1306 aa21.93■■□□□ 1.1
XRCC3-210ENST00000554974 HRCP23327 699 aa21.93■■□□□ 1.1
XRCC3-210ENST00000554974 ZC3H6P61129 1189 aaKnown RBP21.93■■□□□ 1.1
XRCC3-210ENST00000554974 SPATA31A1Q5TZJ5 1347 aa21.93■■□□□ 1.1
XRCC3-210ENST00000554974 STRN4Q9NRL3 753 aa21.93■■□□□ 1.1
XRCC3-210ENST00000554974 EN1Q05925 392 aaPredicted RBP21.92■■□□□ 1.1
XRCC3-210ENST00000554974 LMO7Q8WWI1 1683 aa21.9■■□□□ 1.1
XRCC3-210ENST00000554974 QRICH2Q9H0J4 1663 aa21.89■■□□□ 1.1
XRCC3-210ENST00000554974 NBPF1Q3BBV0 1214 aa21.89■■□□□ 1.09
XRCC3-210ENST00000554974 NBPF8Q3BBV2 869 aa21.89■■□□□ 1.09
XRCC3-210ENST00000554974 USP35Q9P2H5 1018 aa21.89■■□□□ 1.09
XRCC3-210ENST00000554974 CCDC61Q9Y6R9 512 aa21.89■■□□□ 1.09
XRCC3-210ENST00000554974 DISP2A7MBM2 1401 aa21.89■■□□□ 1.09
XRCC3-210ENST00000554974 SSH2Q76I76 1423 aa21.89■■□□□ 1.09
XRCC3-210ENST00000554974 CAMTA1Q9Y6Y1 1673 aa21.88■■□□□ 1.09
XRCC3-210ENST00000554974 PLEKHG3A1L390 1219 aa21.86■■□□□ 1.09
XRCC3-210ENST00000554974 PPIP5K1Q6PFW1 1433 aa21.86■■□□□ 1.09
XRCC3-210ENST00000554974 ABTB2Q8N961 1025 aa21.85■■□□□ 1.09
XRCC3-210ENST00000554974 USP19O94966 1318 aa21.84■■□□□ 1.09
XRCC3-210ENST00000554974 TRIM37O94972 964 aa21.84■■□□□ 1.09
XRCC3-210ENST00000554974 R3HDM1Q15032 1099 aaKnown RBP21.84■■□□□ 1.09
XRCC3-210ENST00000554974 SRPK2P78362 688 aaKnown RBP21.83■■□□□ 1.09
XRCC3-210ENST00000554974 EZH2Q15910 746 aaKnown RBP21.83■■□□□ 1.09
XRCC3-210ENST00000554974 LARP1Q6PKG0 1096 aaKnown RBP21.83■■□□□ 1.09
XRCC3-210ENST00000554974 CPDO75976 1380 aa21.83■■□□□ 1.08
XRCC3-210ENST00000554974 CENPJQ9HC77 1338 aaPredicted RBP21.82■■□□□ 1.08
XRCC3-210ENST00000554974 EVA1CP58658 441 aa21.82■■□□□ 1.08
XRCC3-210ENST00000554974 CABP2Q9NPB3 220 aa21.82■■□□□ 1.08
XRCC3-210ENST00000554974 RREB1Q92766 1687 aa21.82■■□□□ 1.08
XRCC3-210ENST00000554974 FAM196AQ6ZSG2 479 aa21.81■■□□□ 1.08
XRCC3-210ENST00000554974 NUP188Q5SRE5 1749 aa21.8■■□□□ 1.08
XRCC3-210ENST00000554974 COL5A2P05997 1499 aaPredicted RBP21.79■■□□□ 1.08
XRCC3-210ENST00000554974 BARGINQ6ZT62 677 aa21.79■■□□□ 1.08
XRCC3-210ENST00000554974 PARP4Q9UKK3 1724 aaKnown RBP21.79■■□□□ 1.08
XRCC3-210ENST00000554974 CAMKK2Q96RR4 588 aa21.78■■□□□ 1.08
XRCC3-210ENST00000554974 PIK3C2AO00443 1686 aa21.77■■□□□ 1.08
XRCC3-210ENST00000554974 APBA3O96018 575 aa21.77■■□□□ 1.08
XRCC3-210ENST00000554974 GCP02774 474 aa21.77■■□□□ 1.08
XRCC3-210ENST00000554974 PDE3BQ13370 1112 aa21.77■■□□□ 1.08
XRCC3-210ENST00000554974 TCP11L2Q8N4U5 519 aa21.77■■□□□ 1.08
XRCC3-210ENST00000554974 USP6P35125 1406 aa21.76■■□□□ 1.07
XRCC3-210ENST00000554974 NLRP13Q86W25 1043 aa21.76■■□□□ 1.07
XRCC3-210ENST00000554974 TRPM1Q7Z4N2 1603 aa21.76■■□□□ 1.07
XRCC3-210ENST00000554974 SLIT3O75094 1523 aa21.75■■□□□ 1.07
XRCC3-210ENST00000554974 ZBTB7CA1YPR0 619 aa21.75■■□□□ 1.07
XRCC3-210ENST00000554974 PARD3Q8TEW0 1356 aa21.74■■□□□ 1.07
XRCC3-210ENST00000554974 LRRC37A3O60309 1634 aa21.74■■□□□ 1.07
XRCC3-210ENST00000554974 CABP1Q9NZU7 370 aa21.73■■□□□ 1.07
XRCC3-210ENST00000554974 CRB1P82279 1406 aa21.72■■□□□ 1.07
XRCC3-210ENST00000554974 WNK3Q9BYP7 1800 aa21.72■■□□□ 1.07
XRCC3-210ENST00000554974 PEAK1Q9H792 1746 aa21.72■■□□□ 1.07
XRCC3-210ENST00000554974 L3MBTL2Q969R5 705 aa21.71■■□□□ 1.07
XRCC3-210ENST00000554974 BRD4O60885 1362 aaPredicted RBP21.71■■□□□ 1.07
XRCC3-210ENST00000554974 COL18A1P39060 1754 aa21.71■■□□□ 1.07
XRCC3-210ENST00000554974 NLRP6P59044 892 aa21.7■■□□□ 1.06
XRCC3-210ENST00000554974 AKAP12Q02952 1782 aa21.69■■□□□ 1.06
XRCC3-210ENST00000554974 THRAP3Q9Y2W1 955 aaKnown RBP21.69■■□□□ 1.06
XRCC3-210ENST00000554974 AATKQ6ZMQ8 1374 aa21.68■■□□□ 1.06
XRCC3-210ENST00000554974 SBF2Q86WG5 1849 aa21.68■■□□□ 1.06
XRCC3-210ENST00000554974 RGPD5Q99666 1765 aa21.67■■□□□ 1.06
XRCC3-210ENST00000554974 OVOS2A0A0G2JMS6 1433 aa21.66■■□□□ 1.06
XRCC3-210ENST00000554974 OVOS2A0A0J9YW53 1432 aa21.66■■□□□ 1.06
XRCC3-210ENST00000554974 OVOS2Q6IE36 1432 aa21.66■■□□□ 1.06
XRCC3-210ENST00000554974 CPSF1Q10570 1443 aaKnown RBP21.65■■□□□ 1.06
XRCC3-210ENST00000554974 EVC2Q86UK5 1308 aa21.65■■□□□ 1.06
XRCC3-210ENST00000554974 SIN3AQ96ST3 1273 aa21.65■■□□□ 1.06
XRCC3-210ENST00000554974 RGPD3A6NKT7 1758 aaPredicted RBP21.64■■□□□ 1.06
XRCC3-210ENST00000554974 RGPD4Q7Z3J3 1758 aa21.64■■□□□ 1.06
XRCC3-210ENST00000554974 ROCK2O75116 1388 aaKnown RBP21.63■■□□□ 1.05
XRCC3-210ENST00000554974 TOM1L2Q6ZVM7 507 aa21.63■■□□□ 1.05
XRCC3-210ENST00000554974 SOX12O15370 315 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms