RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 CCDC9Q9Y3X0 531 aaKnown RBP17.07■□□□□ 0.32
PSMC6-207ENST00000554952 CCDC61Q9Y6R9 512 aa17.07■□□□□ 0.32
PSMC6-207ENST00000554952 ATAD2Q6PL18 1390 aa17.06■□□□□ 0.32
PSMC6-207ENST00000554952 KIAA1210Q9ULL0 1709 aa17.06■□□□□ 0.32
PSMC6-207ENST00000554952 CENPJQ9HC77 1338 aaPredicted RBP17.05■□□□□ 0.32
PSMC6-207ENST00000554952 SRPK2P78362 688 aaKnown RBP17.05■□□□□ 0.32
PSMC6-207ENST00000554952 NBPF8Q3BBV2 869 aa17.05■□□□□ 0.32
PSMC6-207ENST00000554952 ACEP12821 1306 aa17.04■□□□□ 0.32
PSMC6-207ENST00000554952 VPS72Q15906 364 aa17.04■□□□□ 0.32
PSMC6-207ENST00000554952 PLEKHG3A1L390 1219 aa17.03■□□□□ 0.32
PSMC6-207ENST00000554952 NUTM2GQ5VZR2 741 aa17.03■□□□□ 0.32
PSMC6-207ENST00000554952 CABP2Q9NPB3 220 aa17.03■□□□□ 0.32
PSMC6-207ENST00000554952 BTG4Q9NY30 223 aa17.03■□□□□ 0.32
PSMC6-207ENST00000554952 ATP7BP35670 1465 aa17.03■□□□□ 0.32
PSMC6-207ENST00000554952 RALGAPBQ86X10 1494 aa17.03■□□□□ 0.32
PSMC6-207ENST00000554952 TRPM3Q9HCF6 1732 aaPredicted RBP17.02■□□□□ 0.32
PSMC6-207ENST00000554952 SEPT12Q8IYM1 358 aa17.01■□□□□ 0.31
PSMC6-207ENST00000554952 TNKS1BP1Q9C0C2 1729 aaKnown RBP17■□□□□ 0.31
PSMC6-207ENST00000554952 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
PSMC6-207ENST00000554952 ALS2Q96Q42 1657 aa16.99■□□□□ 0.31
PSMC6-207ENST00000554952 POLR3AO14802 1390 aaPredicted RBP16.99■□□□□ 0.31
PSMC6-207ENST00000554952 ITSN1Q15811 1721 aa16.99■□□□□ 0.31
PSMC6-207ENST00000554952 GLI3P10071 1580 aa16.98■□□□□ 0.31
PSMC6-207ENST00000554952 A0A0G2JS52 829 aa16.98■□□□□ 0.31
PSMC6-207ENST00000554952 ONECUT3O60422 494 aaPredicted RBP16.98■□□□□ 0.31
PSMC6-207ENST00000554952 MYT1Q01538 1121 aa16.98■□□□□ 0.31
PSMC6-207ENST00000554952 ABTB2Q8N961 1025 aa16.98■□□□□ 0.31
PSMC6-207ENST00000554952 ABCA3Q99758 1704 aa16.98■□□□□ 0.31
PSMC6-207ENST00000554952 ZC3H6P61129 1189 aaKnown RBP16.97■□□□□ 0.31
PSMC6-207ENST00000554952 CCDC125Q86Z20 511 aa16.97■□□□□ 0.31
PSMC6-207ENST00000554952 CABP1Q9NZU7 370 aa16.97■□□□□ 0.31
PSMC6-207ENST00000554952 ROCK2O75116 1388 aaKnown RBP16.97■□□□□ 0.31
PSMC6-207ENST00000554952 PLCH1Q4KWH8 1693 aa16.97■□□□□ 0.31
PSMC6-207ENST00000554952 NWD2Q9ULI1 1742 aa16.96■□□□□ 0.31
PSMC6-207ENST00000554952 CHRNA2Q15822 529 aa16.96■□□□□ 0.31
PSMC6-207ENST00000554952 PPIP5K1Q6PFW1 1433 aa16.96■□□□□ 0.3
PSMC6-207ENST00000554952 FAM98CQ17RN3 349 aaKnown RBP16.95■□□□□ 0.3
PSMC6-207ENST00000554952 EVC2Q86UK5 1308 aa16.95■□□□□ 0.3
PSMC6-207ENST00000554952 KIAA0232Q92628 1395 aa16.94■□□□□ 0.3
PSMC6-207ENST00000554952 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
PSMC6-207ENST00000554952 KRT27Q7Z3Y8 459 aa16.94■□□□□ 0.3
PSMC6-207ENST00000554952 NLRP13Q86W25 1043 aa16.93■□□□□ 0.3
PSMC6-207ENST00000554952 STRN4Q9NRL3 753 aa16.93■□□□□ 0.3
PSMC6-207ENST00000554952 COL14A1Q05707 1796 aaKnown RBP16.92■□□□□ 0.3
PSMC6-207ENST00000554952 EVA1CP58658 441 aa16.92■□□□□ 0.3
PSMC6-207ENST00000554952 SPATA31A5Q5VU36 1347 aa16.92■□□□□ 0.3
PSMC6-207ENST00000554952 SPATA31A7Q8IWB4 1347 aa16.92■□□□□ 0.3
PSMC6-207ENST00000554952 BRWD3Q6RI45 1802 aa16.91■□□□□ 0.3
PSMC6-207ENST00000554952 TOPAZ1Q8N9V7 1692 aa16.91■□□□□ 0.3
PSMC6-207ENST00000554952 QRICH2Q9H0J4 1663 aa16.91■□□□□ 0.3
PSMC6-207ENST00000554952 TRPM1Q7Z4N2 1603 aa16.91■□□□□ 0.3
PSMC6-207ENST00000554952 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
PSMC6-207ENST00000554952 CARD11Q9BXL7 1154 aa16.9■□□□□ 0.3
PSMC6-207ENST00000554952 GCP02774 474 aa16.89■□□□□ 0.29
PSMC6-207ENST00000554952 NLRP6P59044 892 aa16.89■□□□□ 0.29
PSMC6-207ENST00000554952 TONSLQ96HA7 1378 aa16.89■□□□□ 0.29
PSMC6-207ENST00000554952 CRYBG1Q9Y4K1 1723 aa16.88■□□□□ 0.29
PSMC6-207ENST00000554952 USP35Q9P2H5 1018 aa16.88■□□□□ 0.29
PSMC6-207ENST00000554952 ZRANB1Q9UGI0 708 aa16.88■□□□□ 0.29
PSMC6-207ENST00000554952 BLMP54132 1417 aaPredicted RBP16.87■□□□□ 0.29
PSMC6-207ENST00000554952 NRAPQ86VF7 1730 aa16.87■□□□□ 0.29
PSMC6-207ENST00000554952 EP400Q96L91 3159 aa16.87■□□□□ 0.29
PSMC6-207ENST00000554952 ZBTB7CA1YPR0 619 aa16.87■□□□□ 0.29
PSMC6-207ENST00000554952 DEFB132Q7Z7B7 95 aa16.87■□□□□ 0.29
PSMC6-207ENST00000554952 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
PSMC6-207ENST00000554952 USP19O94966 1318 aa16.87■□□□□ 0.29
PSMC6-207ENST00000554952 SPATA31A1Q5TZJ5 1347 aa16.87■□□□□ 0.29
PSMC6-207ENST00000554952 BRD4O60885 1362 aaPredicted RBP16.87■□□□□ 0.29
PSMC6-207ENST00000554952 FAM182BQ5T319 152 aa16.86■□□□□ 0.29
PSMC6-207ENST00000554952 U3KPZ7 1027 aaPredicted RBP16.86■□□□□ 0.29
PSMC6-207ENST00000554952 USP6P35125 1406 aa16.86■□□□□ 0.29
PSMC6-207ENST00000554952 PHRF1Q9P1Y6 1649 aaKnown RBP16.85■□□□□ 0.29
PSMC6-207ENST00000554952 LARP1Q6PKG0 1096 aaKnown RBP16.84■□□□□ 0.29
PSMC6-207ENST00000554952 CPDO75976 1380 aa16.84■□□□□ 0.29
PSMC6-207ENST00000554952 TTC21BQ7Z4L5 1316 aa16.82■□□□□ 0.28
PSMC6-207ENST00000554952 CAMTA1Q9Y6Y1 1673 aa16.81■□□□□ 0.28
PSMC6-207ENST00000554952 SSH2Q76I76 1423 aa16.81■□□□□ 0.28
PSMC6-207ENST00000554952 TCP11L2Q8N4U5 519 aa16.81■□□□□ 0.28
PSMC6-207ENST00000554952 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
PSMC6-207ENST00000554952 SOX12O15370 315 aa16.8■□□□□ 0.28
PSMC6-207ENST00000554952 BARGINQ6ZT62 677 aa16.8■□□□□ 0.28
PSMC6-207ENST00000554952 NRKQ7Z2Y5 1582 aa16.8■□□□□ 0.28
PSMC6-207ENST00000554952 KTN1Q86UP2 1357 aaKnown RBP16.79■□□□□ 0.28
PSMC6-207ENST00000554952 BAG6P46379 1132 aa16.79■□□□□ 0.28
PSMC6-207ENST00000554952 PDE3BQ13370 1112 aa16.79■□□□□ 0.28
PSMC6-207ENST00000554952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
PSMC6-207ENST00000554952 TTC21AQ8NDW8 1320 aa16.77■□□□□ 0.28
PSMC6-207ENST00000554952 FAM196AQ6ZSG2 479 aa16.77■□□□□ 0.28
PSMC6-207ENST00000554952 KCNH5Q8NCM2 988 aa16.77■□□□□ 0.28
PSMC6-207ENST00000554952 SLC12A5Q9H2X9 1139 aa16.77■□□□□ 0.28
PSMC6-207ENST00000554952 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.27
PSMC6-207ENST00000554952 SBNO2Q9Y2G9 1366 aa16.77■□□□□ 0.27
PSMC6-207ENST00000554952 EN1Q05925 392 aaPredicted RBP16.76■□□□□ 0.27
PSMC6-207ENST00000554952 THRAP3Q9Y2W1 955 aaKnown RBP16.76■□□□□ 0.27
PSMC6-207ENST00000554952 CPSF1Q10570 1443 aaKnown RBP16.76■□□□□ 0.27
PSMC6-207ENST00000554952 THSD7AQ9UPZ6 1657 aa16.75■□□□□ 0.27
PSMC6-207ENST00000554952 ST20-MTHFSA0A0A6YYL1 179 aa16.75■□□□□ 0.27
PSMC6-207ENST00000554952 TRIM37O94972 964 aa16.75■□□□□ 0.27
PSMC6-207ENST00000554952 TOM1L2Q6ZVM7 507 aa16.75■□□□□ 0.27
PSMC6-207ENST00000554952 HDGFL2Q7Z4V5 671 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms