RNA–Protein interactions for RNA: ENST00000554894.5

LINC01578-204, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 3 BASIC

Gene LINC01578, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-204ENST00000554894 PAK3O75914 559 aaPredicted RBP40.43■■■■■ 4.06
LINC01578-204ENST00000554894 CABP2Q9NPB3 220 aa40.41■■■■■ 4.06
LINC01578-204ENST00000554894 ACEP12821 1306 aa40.41■■■■■ 4.06
LINC01578-204ENST00000554894 PPIP5K1Q6PFW1 1433 aa40.4■■■■■ 4.06
LINC01578-204ENST00000554894 RALGAPBQ86X10 1494 aa40.39■■■■■ 4.06
LINC01578-204ENST00000554894 NWD2Q9ULI1 1742 aa40.39■■■■■ 4.06
LINC01578-204ENST00000554894 PLEKHG3A1L390 1219 aa40.38■■■■■ 4.05
LINC01578-204ENST00000554894 UNC5CLQ8IV45 518 aa40.34■■■■■ 4.05
LINC01578-204ENST00000554894 PHRF1Q9P1Y6 1649 aaKnown RBP40.34■■■■■ 4.05
LINC01578-204ENST00000554894 EVC2Q86UK5 1308 aa40.32■■■■■ 4.04
LINC01578-204ENST00000554894 CARD11Q9BXL7 1154 aa40.3■■■■■ 4.04
LINC01578-204ENST00000554894 GLI3P10071 1580 aa40.3■■■■■ 4.04
LINC01578-204ENST00000554894 COL14A1Q05707 1796 aaKnown RBP40.29■■■■■ 4.04
LINC01578-204ENST00000554894 NRAPQ86VF7 1730 aa40.28■■■■■ 4.04
LINC01578-204ENST00000554894 GJD4Q96KN9 370 aaPredicted RBP40.28■■■■■ 4.04
LINC01578-204ENST00000554894 FAM83GA6ND36 823 aa40.26■■■■■ 4.04
LINC01578-204ENST00000554894 UPF1Q92900 1129 aaKnown RBP eCLIP40.25■■■■■ 4.032e-7■■■■■ 44.5
LINC01578-204ENST00000554894 NUTM2GQ5VZR2 741 aa40.23■■■■■ 4.03
LINC01578-204ENST00000554894 CABP1Q9NZU7 370 aa40.23■■■■■ 4.03
LINC01578-204ENST00000554894 SBNO2Q9Y2G9 1366 aa40.21■■■■■ 4.03
LINC01578-204ENST00000554894 NRKQ7Z2Y5 1582 aa40.18■■■■■ 4.02
LINC01578-204ENST00000554894 USP6P35125 1406 aa40.18■■■■■ 4.02
LINC01578-204ENST00000554894 VPS72Q15906 364 aa40.17■■■■■ 4.02
LINC01578-204ENST00000554894 AKAP12Q02952 1782 aa40.16■■■■■ 4.02
LINC01578-204ENST00000554894 ABTB2Q8N961 1025 aa40.16■■■■■ 4.02
LINC01578-204ENST00000554894 BTG4Q9NY30 223 aa40.15■■■■■ 4.02
LINC01578-204ENST00000554894 BRD4O60885 1362 aaPredicted RBP40.14■■■■■ 4.02
LINC01578-204ENST00000554894 PRDM11Q9NQV5 511 aa40.14■■■■■ 4.02
LINC01578-204ENST00000554894 PCGF6Q9BYE7 350 aa40.13■■■■■ 4.01
LINC01578-204ENST00000554894 CCDC9Q9Y3X0 531 aaKnown RBP40.13■■■■■ 4.01
LINC01578-204ENST00000554894 ATAD2Q6PL18 1390 aa40.12■■■■■ 4.01
LINC01578-204ENST00000554894 KIAA0232Q92628 1395 aa40.12■■■■■ 4.01
LINC01578-204ENST00000554894 BRWD3Q6RI45 1802 aa40.09■■■■■ 4.01
LINC01578-204ENST00000554894 USP19O94966 1318 aa40.09■■■■■ 4.01
LINC01578-204ENST00000554894 PIK3C2AO00443 1686 aa40.08■■■■■ 4.01
LINC01578-204ENST00000554894 ZC3H6P61129 1189 aaKnown RBP40.07■■■■■ 4.01
LINC01578-204ENST00000554894 SSH2Q76I76 1423 aa40.07■■■■■ 4
LINC01578-204ENST00000554894 CHRNA2Q15822 529 aa40.06■■■■■ 4
LINC01578-204ENST00000554894 NLRP13Q86W25 1043 aa40.04■■■■■ 4
LINC01578-204ENST00000554894 MON2Q7Z3U7 1717 aa40.02■■■■■ 4
LINC01578-204ENST00000554894 CPSF1Q10570 1443 aaKnown RBP40■■■■□ 3.99
LINC01578-204ENST00000554894 CLSPNQ9HAW4 1339 aa39.99■■■■□ 3.99
LINC01578-204ENST00000554894 SEPT12Q8IYM1 358 aa39.99■■■■□ 3.99
LINC01578-204ENST00000554894 SLIT3O75094 1523 aa39.99■■■■□ 3.99
LINC01578-204ENST00000554894 LMO7Q8WWI1 1683 aa39.99■■■■□ 3.99
LINC01578-204ENST00000554894 ZNF692Q9BU19 519 aaPredicted RBP39.98■■■■□ 3.99
LINC01578-204ENST00000554894 CPDO75976 1380 aa39.97■■■■□ 3.99
LINC01578-204ENST00000554894 GCP02774 474 aa39.96■■■■□ 3.99
LINC01578-204ENST00000554894 NLRP6P59044 892 aa39.96■■■■□ 3.99
LINC01578-204ENST00000554894 KTN1Q86UP2 1357 aaKnown RBP39.95■■■■□ 3.99
LINC01578-204ENST00000554894 SPATA31A5Q5VU36 1347 aa39.94■■■■□ 3.98
LINC01578-204ENST00000554894 TTC21BQ7Z4L5 1316 aa39.94■■■■□ 3.98
LINC01578-204ENST00000554894 SPATA31A7Q8IWB4 1347 aa39.94■■■■□ 3.98
LINC01578-204ENST00000554894 ST20-MTHFSA0A0A6YYL1 179 aa39.94■■■■□ 3.98
LINC01578-204ENST00000554894 ONECUT3O60422 494 aaPredicted RBP39.94■■■■□ 3.98
LINC01578-204ENST00000554894 CD163L1Q9NR16 1453 aa39.93■■■■□ 3.98
LINC01578-204ENST00000554894 CAMTA1Q9Y6Y1 1673 aa39.92■■■■□ 3.98
LINC01578-204ENST00000554894 EP400Q96L91 3159 aa39.92■■■■□ 3.98
LINC01578-204ENST00000554894 FAM98CQ17RN3 349 aaKnown RBP39.92■■■■□ 3.98
LINC01578-204ENST00000554894 TESK2Q96S53 571 aa39.92■■■■□ 3.98
LINC01578-204ENST00000554894 STRN4Q9NRL3 753 aa39.92■■■■□ 3.98
LINC01578-204ENST00000554894 A0A0G2JS52 829 aa39.91■■■■□ 3.98
LINC01578-204ENST00000554894 MYT1Q01538 1121 aa39.91■■■■□ 3.98
LINC01578-204ENST00000554894 TTC21AQ8NDW8 1320 aa39.9■■■■□ 3.98
LINC01578-204ENST00000554894 TMC1Q8TDI8 760 aa39.89■■■■□ 3.98
LINC01578-204ENST00000554894 THSD7AQ9UPZ6 1657 aa39.89■■■■□ 3.98
LINC01578-204ENST00000554894 USP47Q96K76 1375 aa39.88■■■■□ 3.97
LINC01578-204ENST00000554894 TIMELESSQ9UNS1 1208 aa39.87■■■■□ 3.97
LINC01578-204ENST00000554894 SPATA31A1Q5TZJ5 1347 aa39.85■■■■□ 3.97
LINC01578-204ENST00000554894 SLC12A5Q9H2X9 1139 aa39.84■■■■□ 3.97
LINC01578-204ENST00000554894 ZBTB7CA1YPR0 619 aa39.83■■■■□ 3.97
LINC01578-204ENST00000554894 PUS7Q96PZ0 661 aaKnown RBP39.83■■■■□ 3.97
LINC01578-204ENST00000554894 KRT27Q7Z3Y8 459 aa39.82■■■■□ 3.97
LINC01578-204ENST00000554894 USP54Q70EL1 1684 aa39.81■■■■□ 3.96
LINC01578-204ENST00000554894 EVA1CP58658 441 aa39.81■■■■□ 3.96
LINC01578-204ENST00000554894 COL5A2P05997 1499 aaPredicted RBP39.81■■■■□ 3.96
LINC01578-204ENST00000554894 HDGFL2Q7Z4V5 671 aaPredicted RBP39.8■■■■□ 3.96
LINC01578-204ENST00000554894 COL18A1P39060 1754 aa39.79■■■■□ 3.96
LINC01578-204ENST00000554894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.79■■■■□ 3.96
LINC01578-204ENST00000554894 A0A1W2PP64 1363 aa39.79■■■■□ 3.96
LINC01578-204ENST00000554894 LARP1Q6PKG0 1096 aaKnown RBP39.77■■■■□ 3.96
LINC01578-204ENST00000554894 CCER1Q8TC90 406 aaPredicted RBP39.77■■■■□ 3.96
LINC01578-204ENST00000554894 NFAT5O94916 1531 aa39.76■■■■□ 3.96
LINC01578-204ENST00000554894 EDC4Q6P2E9 1401 aaKnown RBP39.76■■■■□ 3.96
LINC01578-204ENST00000554894 AATKQ6ZMQ8 1374 aa39.76■■■■□ 3.96
LINC01578-204ENST00000554894 USP35Q9P2H5 1018 aa39.76■■■■□ 3.96
LINC01578-204ENST00000554894 SOX12O15370 315 aa39.75■■■■□ 3.95
LINC01578-204ENST00000554894 SLC24A1O60721 1099 aa39.75■■■■□ 3.95
LINC01578-204ENST00000554894 BLMP54132 1417 aaPredicted RBP39.74■■■■□ 3.95
LINC01578-204ENST00000554894 NINLQ9Y2I6 1382 aa39.74■■■■□ 3.95
LINC01578-204ENST00000554894 CCDC125Q86Z20 511 aa39.74■■■■□ 3.95
LINC01578-204ENST00000554894 KCNH5Q8NCM2 988 aa39.74■■■■□ 3.95
LINC01578-204ENST00000554894 TERF2IPQ9NYB0 399 aa39.74■■■■□ 3.95
LINC01578-204ENST00000554894 ZRANB1Q9UGI0 708 aa39.73■■■■□ 3.95
LINC01578-204ENST00000554894 USP31Q70CQ4 1352 aa39.72■■■■□ 3.95
LINC01578-204ENST00000554894 NME9Q86XW9 330 aa39.71■■■■□ 3.95
LINC01578-204ENST00000554894 RGPD5Q99666 1765 aa39.71■■■■□ 3.95
LINC01578-204ENST00000554894 TMF1P82094 1093 aa39.69■■■■□ 3.94
LINC01578-204ENST00000554894 ARHGEF25Q86VW2 580 aa39.68■■■■□ 3.94
LINC01578-204ENST00000554894 CRB1P82279 1406 aa39.67■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms