RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 HRCP23327 699 aa18.25■□□□□ 0.51
RDH11-207ENST00000554731 PAK3O75914 559 aaPredicted RBP18.24■□□□□ 0.51
RDH11-207ENST00000554731 ALS2Q96Q42 1657 aa18.24■□□□□ 0.51
RDH11-207ENST00000554731 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
RDH11-207ENST00000554731 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
RDH11-207ENST00000554731 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
RDH11-207ENST00000554731 NUDT16Q96DE0 195 aaKnown RBP18.2■□□□□ 0.5
RDH11-207ENST00000554731 PRDM11Q9NQV5 511 aa18.2■□□□□ 0.5
RDH11-207ENST00000554731 BAG6P46379 1132 aa18.19■□□□□ 0.5
RDH11-207ENST00000554731 ATP7BP35670 1465 aa18.19■□□□□ 0.5
RDH11-207ENST00000554731 SPATA31A5Q5VU36 1347 aa18.19■□□□□ 0.5
RDH11-207ENST00000554731 SPATA31A7Q8IWB4 1347 aa18.19■□□□□ 0.5
RDH11-207ENST00000554731 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
RDH11-207ENST00000554731 CDK19Q9BWU1 502 aa18.17■□□□□ 0.5
RDH11-207ENST00000554731 ITSN1Q15811 1721 aa18.16■□□□□ 0.5
RDH11-207ENST00000554731 KIAA0232Q92628 1395 aa18.15■□□□□ 0.5
RDH11-207ENST00000554731 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
RDH11-207ENST00000554731 CHRNA2Q15822 529 aa18.13■□□□□ 0.49
RDH11-207ENST00000554731 CCDC61Q9Y6R9 512 aa18.13■□□□□ 0.49
RDH11-207ENST00000554731 POLR3AO14802 1390 aaPredicted RBP18.13■□□□□ 0.49
RDH11-207ENST00000554731 NBPF8Q3BBV2 869 aa18.12■□□□□ 0.49
RDH11-207ENST00000554731 FAM182BQ5T319 152 aa18.12■□□□□ 0.49
RDH11-207ENST00000554731 NUTM2GQ5VZR2 741 aa18.12■□□□□ 0.49
RDH11-207ENST00000554731 ACEP12821 1306 aa18.12■□□□□ 0.49
RDH11-207ENST00000554731 PLEKHG3A1L390 1219 aa18.11■□□□□ 0.49
RDH11-207ENST00000554731 ZC3H6P61129 1189 aaKnown RBP18.11■□□□□ 0.49
RDH11-207ENST00000554731 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
RDH11-207ENST00000554731 SPATA31A1Q5TZJ5 1347 aa18.11■□□□□ 0.49
RDH11-207ENST00000554731 THSD7AQ9UPZ6 1657 aa18.1■□□□□ 0.49
RDH11-207ENST00000554731 EN1Q05925 392 aaPredicted RBP18.09■□□□□ 0.49
RDH11-207ENST00000554731 NBPF1Q3BBV0 1214 aa18.09■□□□□ 0.49
RDH11-207ENST00000554731 KIAA1210Q9ULL0 1709 aa18.09■□□□□ 0.49
RDH11-207ENST00000554731 PHRF1Q9P1Y6 1649 aaKnown RBP18.09■□□□□ 0.49
RDH11-207ENST00000554731 PSDA5PKW4 1024 aaPredicted RBP18.08■□□□□ 0.48
RDH11-207ENST00000554731 ABTB2Q8N961 1025 aa18.08■□□□□ 0.48
RDH11-207ENST00000554731 RGPD1P0DJD0 1748 aa18.08■□□□□ 0.48
RDH11-207ENST00000554731 TOPAZ1Q8N9V7 1692 aa18.08■□□□□ 0.48
RDH11-207ENST00000554731 EVA1CP58658 441 aa18.07■□□□□ 0.48
RDH11-207ENST00000554731 DISP2A7MBM2 1401 aa18.06■□□□□ 0.48
RDH11-207ENST00000554731 LRP5O75197 1615 aa18.06■□□□□ 0.48
RDH11-207ENST00000554731 SRPK2P78362 688 aaKnown RBP18.06■□□□□ 0.48
RDH11-207ENST00000554731 FAM196AQ6ZSG2 479 aa18.06■□□□□ 0.48
RDH11-207ENST00000554731 USP35Q9P2H5 1018 aa18.06■□□□□ 0.48
RDH11-207ENST00000554731 CENPJQ9HC77 1338 aaPredicted RBP18.05■□□□□ 0.48
RDH11-207ENST00000554731 SSH2Q76I76 1423 aa18.05■□□□□ 0.48
RDH11-207ENST00000554731 USP19O94966 1318 aa18.04■□□□□ 0.48
RDH11-207ENST00000554731 BARGINQ6ZT62 677 aa18.04■□□□□ 0.48
RDH11-207ENST00000554731 NLRP13Q86W25 1043 aa18.04■□□□□ 0.48
RDH11-207ENST00000554731 CPDO75976 1380 aa18.04■□□□□ 0.48
RDH11-207ENST00000554731 TRIM37O94972 964 aa18.03■□□□□ 0.48
RDH11-207ENST00000554731 PPIP5K1Q6PFW1 1433 aa18.03■□□□□ 0.48
RDH11-207ENST00000554731 NRKQ7Z2Y5 1582 aa18.03■□□□□ 0.48
RDH11-207ENST00000554731 PDE3BQ13370 1112 aa18.02■□□□□ 0.48
RDH11-207ENST00000554731 LARP1Q6PKG0 1096 aaKnown RBP18.02■□□□□ 0.48
RDH11-207ENST00000554731 CABP2Q9NPB3 220 aa18.02■□□□□ 0.48
RDH11-207ENST00000554731 GCP02774 474 aa18.01■□□□□ 0.47
RDH11-207ENST00000554731 R3HDM1Q15032 1099 aaKnown RBP18.01■□□□□ 0.47
RDH11-207ENST00000554731 EZH2Q15910 746 aaKnown RBP18.01■□□□□ 0.47
RDH11-207ENST00000554731 TCP11L2Q8N4U5 519 aa18.01■□□□□ 0.47
RDH11-207ENST00000554731 CAMTA1Q9Y6Y1 1673 aa18.01■□□□□ 0.47
RDH11-207ENST00000554731 BRD4O60885 1362 aaPredicted RBP18.01■□□□□ 0.47
RDH11-207ENST00000554731 TNS1Q9HBL0 1735 aaKnown RBP18.01■□□□□ 0.47
RDH11-207ENST00000554731 CAMKK2Q96RR4 588 aa18■□□□□ 0.47
RDH11-207ENST00000554731 APBA3O96018 575 aa17.99■□□□□ 0.47
RDH11-207ENST00000554731 THRAP3Q9Y2W1 955 aaKnown RBP17.98■□□□□ 0.47
RDH11-207ENST00000554731 PARD3Q8TEW0 1356 aa17.98■□□□□ 0.47
RDH11-207ENST00000554731 LMO7Q8WWI1 1683 aa17.98■□□□□ 0.47
RDH11-207ENST00000554731 CABP1Q9NZU7 370 aa17.97■□□□□ 0.47
RDH11-207ENST00000554731 NLRP6P59044 892 aa17.96■□□□□ 0.47
RDH11-207ENST00000554731 L3MBTL2Q969R5 705 aa17.96■□□□□ 0.47
RDH11-207ENST00000554731 USP6P35125 1406 aa17.96■□□□□ 0.47
RDH11-207ENST00000554731 QRICH2Q9H0J4 1663 aa17.96■□□□□ 0.47
RDH11-207ENST00000554731 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
RDH11-207ENST00000554731 ZBTB7CA1YPR0 619 aa17.95■□□□□ 0.46
RDH11-207ENST00000554731 EVC2Q86UK5 1308 aa17.94■□□□□ 0.46
RDH11-207ENST00000554731 CRB1P82279 1406 aa17.93■□□□□ 0.46
RDH11-207ENST00000554731 AATKQ6ZMQ8 1374 aa17.92■□□□□ 0.46
RDH11-207ENST00000554731 C11orf95C9JLR9 678 aaPredicted RBP17.92■□□□□ 0.46
RDH11-207ENST00000554731 SLIT3O75094 1523 aa17.91■□□□□ 0.46
RDH11-207ENST00000554731 NBPF14Q5TI25 921 aa17.9■□□□□ 0.46
RDH11-207ENST00000554731 PARP4Q9UKK3 1724 aaKnown RBP17.89■□□□□ 0.46
RDH11-207ENST00000554731 TOM1L2Q6ZVM7 507 aa17.89■□□□□ 0.45
RDH11-207ENST00000554731 ZNF692Q9BU19 519 aaPredicted RBP17.89■□□□□ 0.45
RDH11-207ENST00000554731 ROCK2O75116 1388 aaKnown RBP17.89■□□□□ 0.45
RDH11-207ENST00000554731 SIN3AQ96ST3 1273 aa17.88■□□□□ 0.45
RDH11-207ENST00000554731 OVOS2A0A0G2JMS6 1433 aa17.88■□□□□ 0.45
RDH11-207ENST00000554731 OVOS2A0A0J9YW53 1432 aa17.88■□□□□ 0.45
RDH11-207ENST00000554731 OVOS2Q6IE36 1432 aa17.88■□□□□ 0.45
RDH11-207ENST00000554731 RREB1Q92766 1687 aa17.87■□□□□ 0.45
RDH11-207ENST00000554731 DDB1Q16531 1140 aa17.87■□□□□ 0.45
RDH11-207ENST00000554731 TTC21BQ7Z4L5 1316 aa17.87■□□□□ 0.45
RDH11-207ENST00000554731 TRPM1Q7Z4N2 1603 aa17.87■□□□□ 0.45
RDH11-207ENST00000554731 PIK3C2AO00443 1686 aa17.87■□□□□ 0.45
RDH11-207ENST00000554731 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
RDH11-207ENST00000554731 KCNH5Q8NCM2 988 aa17.86■□□□□ 0.45
RDH11-207ENST00000554731 CPSF1Q10570 1443 aaKnown RBP17.85■□□□□ 0.45
RDH11-207ENST00000554731 NUP188Q5SRE5 1749 aa17.85■□□□□ 0.45
RDH11-207ENST00000554731 ARHGEF25Q86VW2 580 aa17.85■□□□□ 0.45
RDH11-207ENST00000554731 WDR17Q8IZU2 1322 aa17.85■□□□□ 0.45
RDH11-207ENST00000554731 TTC21AQ8NDW8 1320 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms