RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 GJA5P36382 358 aa7.55□□□□□ -1.2
VTI1B-203ENST00000554636 SPDYE5A6NIY4 337 aa7.54□□□□□ -1.2
VTI1B-203ENST00000554636 GDF9O60383 454 aa7.54□□□□□ -1.2
VTI1B-203ENST00000554636 PTCRAQ6ISU1 281 aaPredicted RBP7.54□□□□□ -1.2
VTI1B-203ENST00000554636 DDRGK1Q96HY6 314 aa7.54□□□□□ -1.2
VTI1B-203ENST00000554636 RSPH6AQ9H0K4 717 aa7.54□□□□□ -1.2
VTI1B-203ENST00000554636 PKD2L1Q9P0L9 805 aa7.54□□□□□ -1.2
VTI1B-203ENST00000554636 PLEKHG3A1L390 1219 aa7.53□□□□□ -1.2
VTI1B-203ENST00000554636 FAM187AA6NFU0 413 aa7.53□□□□□ -1.2
VTI1B-203ENST00000554636 CTHP32929 405 aa7.53□□□□□ -1.2
VTI1B-203ENST00000554636 PTPRNQ16849 979 aa7.53□□□□□ -1.2
VTI1B-203ENST00000554636 TOPBP1Q92547 1522 aa7.52□□□□□ -1.2
VTI1B-203ENST00000554636 PRKCSHP14314 528 aaPredicted RBP7.52□□□□□ -1.21
VTI1B-203ENST00000554636 LINC01559Q495D7 138 aa7.52□□□□□ -1.21
VTI1B-203ENST00000554636 RTL5Q5HYW3 569 aaPredicted RBP7.52□□□□□ -1.21
VTI1B-203ENST00000554636 PRPF38BQ5VTL8 546 aaKnown RBP7.52□□□□□ -1.21
VTI1B-203ENST00000554636 PER1O15534 1290 aaPredicted RBP7.51□□□□□ -1.21
VTI1B-203ENST00000554636 LILRB3O75022 631 aa7.51□□□□□ -1.21
VTI1B-203ENST00000554636 BRPF1P55201 1214 aaPredicted RBP7.51□□□□□ -1.21
VTI1B-203ENST00000554636 SKOR1P84550 965 aa7.51□□□□□ -1.21
VTI1B-203ENST00000554636 PRR20EP86478 221 aa7.51□□□□□ -1.21
VTI1B-203ENST00000554636 PRR20CP86479 221 aa7.51□□□□□ -1.21
VTI1B-203ENST00000554636 PRR20DP86480 221 aa7.51□□□□□ -1.21
VTI1B-203ENST00000554636 PRR20BP86481 221 aa7.51□□□□□ -1.21
VTI1B-203ENST00000554636 PRR20AP86496 221 aa7.51□□□□□ -1.21
VTI1B-203ENST00000554636 PKDCCQ504Y2 493 aa7.51□□□□□ -1.21
VTI1B-203ENST00000554636 PROCA1Q8NCQ7 364 aaPredicted RBP7.51□□□□□ -1.21
VTI1B-203ENST00000554636 IL27Q8NEV9 243 aa7.51□□□□□ -1.21
VTI1B-203ENST00000554636 UNC93B1Q9H1C4 597 aa7.51□□□□□ -1.21
VTI1B-203ENST00000554636 DNMBPQ6XZF7 1577 aa7.5□□□□□ -1.21
VTI1B-203ENST00000554636 LCE2BO14633 110 aa7.5□□□□□ -1.21
VTI1B-203ENST00000554636 CYP4X1Q8N118 509 aa7.5□□□□□ -1.21
VTI1B-203ENST00000554636 MAP10Q9P2G4 905 aa7.5□□□□□ -1.21
VTI1B-203ENST00000554636 IFT140Q96RY7 1462 aa7.49□□□□□ -1.21
VTI1B-203ENST00000554636 TTC24A2A3L6 582 aaPredicted RBP7.49□□□□□ -1.21
VTI1B-203ENST00000554636 KCNH2Q12809 1159 aa7.49□□□□□ -1.21
VTI1B-203ENST00000554636 SKIV2LQ15477 1246 aaKnown RBP7.49□□□□□ -1.21
VTI1B-203ENST00000554636 SH3D19Q5HYK7 790 aa7.49□□□□□ -1.21
VTI1B-203ENST00000554636 FBXO31Q5XUX0 539 aaPredicted RBP7.49□□□□□ -1.21
VTI1B-203ENST00000554636 DESI1Q6ICB0 168 aa7.49□□□□□ -1.21
VTI1B-203ENST00000554636 TRAF7Q6Q0C0 670 aa7.49□□□□□ -1.21
VTI1B-203ENST00000554636 LYPD8Q6UX82 237 aa7.49□□□□□ -1.21
VTI1B-203ENST00000554636 MRGPRX2Q96LB1 330 aa7.49□□□□□ -1.21
VTI1B-203ENST00000554636 EVA1BQ9NVM1 165 aa7.49□□□□□ -1.21
VTI1B-203ENST00000554636 ABCC8Q09428 1581 aa7.49□□□□□ -1.21
VTI1B-203ENST00000554636 WNT7AO00755 349 aa7.48□□□□□ -1.21
VTI1B-203ENST00000554636 RC3H1Q5TC82 1133 aaKnown RBP7.48□□□□□ -1.21
VTI1B-203ENST00000554636 HELBQ8NG08 1087 aaPredicted RBP7.48□□□□□ -1.21
VTI1B-203ENST00000554636 TUSC1Q2TAM9 212 aa7.47□□□□□ -1.21
VTI1B-203ENST00000554636 BAP1Q92560 729 aa7.47□□□□□ -1.21
VTI1B-203ENST00000554636 ZNF608Q9ULD9 1512 aaPredicted RBP7.47□□□□□ -1.21
VTI1B-203ENST00000554636 WNT7BP56706 349 aa7.46□□□□□ -1.22
VTI1B-203ENST00000554636 SH3BP2P78314 561 aa7.46□□□□□ -1.22
VTI1B-203ENST00000554636 EHBP1Q8NDI1 1231 aa7.46□□□□□ -1.22
VTI1B-203ENST00000554636 TOR4AQ9NXH8 423 aa7.46□□□□□ -1.22
VTI1B-203ENST00000554636 TARBP1Q13395 1621 aaKnown RBP7.45□□□□□ -1.22
VTI1B-203ENST00000554636 POLA1P09884 1462 aaPredicted RBP7.45□□□□□ -1.22
VTI1B-203ENST00000554636 SUPT5HO00267 1087 aaKnown RBP7.45□□□□□ -1.22
VTI1B-203ENST00000554636 F12P00748 615 aaPredicted RBP7.45□□□□□ -1.22
VTI1B-203ENST00000554636 EIF4G3O43432 1585 aaKnown RBP7.45□□□□□ -1.22
VTI1B-203ENST00000554636 CUX1P39880 1505 aa7.44□□□□□ -1.22
VTI1B-203ENST00000554636 J3QL48 77 aa7.44□□□□□ -1.22
VTI1B-203ENST00000554636 ST8SIA5O15466 376 aa7.44□□□□□ -1.22
VTI1B-203ENST00000554636 DGAT1O75907 488 aa7.44□□□□□ -1.22
VTI1B-203ENST00000554636 MYT1Q01538 1121 aa7.44□□□□□ -1.22
VTI1B-203ENST00000554636 CTDSPL2Q05D32 466 aa7.44□□□□□ -1.22
VTI1B-203ENST00000554636 ZNF511Q8NB15 262 aa7.44□□□□□ -1.22
VTI1B-203ENST00000554636 SNIP1Q8TAD8 396 aaKnown RBP7.44□□□□□ -1.22
VTI1B-203ENST00000554636 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.44□□□□□ -1.22
VTI1B-203ENST00000554636 AP1G2O75843 785 aa7.43□□□□□ -1.22
VTI1B-203ENST00000554636 ALDH1A1P00352 501 aa7.43□□□□□ -1.22
VTI1B-203ENST00000554636 LRRN4Q8WUT4 740 aa7.43□□□□□ -1.22
VTI1B-203ENST00000554636 PCMTD1Q96MG8 357 aaPredicted RBP7.43□□□□□ -1.22
VTI1B-203ENST00000554636 AGERQ15109 404 aa7.42□□□□□ -1.22
VTI1B-203ENST00000554636 FOXJ1Q92949 421 aa7.42□□□□□ -1.22
VTI1B-203ENST00000554636 TLL2Q9Y6L7 1015 aa7.42□□□□□ -1.22
VTI1B-203ENST00000554636 FGD5Q6ZNL6 1462 aa7.42□□□□□ -1.22
VTI1B-203ENST00000554636 RAD54L2Q9Y4B4 1467 aa7.42□□□□□ -1.22
VTI1B-203ENST00000554636 SMPD1P17405 629 aa7.41□□□□□ -1.22
VTI1B-203ENST00000554636 WDR97A6NE52 1622 aa7.4□□□□□ -1.22
VTI1B-203ENST00000554636 AQRO60306 1485 aaKnown RBP eCLIP7.39□□□□□ -1.23
VTI1B-203ENST00000554636 RFC5P40937 340 aa7.39□□□□□ -1.23
VTI1B-203ENST00000554636 HPS1Q92902 700 aa7.39□□□□□ -1.23
VTI1B-203ENST00000554636 AAASQ9NRG9 546 aa7.39□□□□□ -1.23
VTI1B-203ENST00000554636 SOGA1O94964 1423 aa7.38□□□□□ -1.23
VTI1B-203ENST00000554636 ARID5BQ14865 1188 aa7.38□□□□□ -1.23
VTI1B-203ENST00000554636 NR6A1Q15406 480 aa7.38□□□□□ -1.23
VTI1B-203ENST00000554636 PPP2R2DQ66LE6 453 aa7.38□□□□□ -1.23
VTI1B-203ENST00000554636 WASF2Q9Y6W5 498 aa7.38□□□□□ -1.23
VTI1B-203ENST00000554636 MAGEB6P1A0A0J9YX57 407 aa7.37□□□□□ -1.23
VTI1B-203ENST00000554636 SIAH2O43255 324 aa7.37□□□□□ -1.23
VTI1B-203ENST00000554636 USP17L8P0C7I0 530 aa7.37□□□□□ -1.23
VTI1B-203ENST00000554636 CARD14Q9BXL6 1004 aa7.37□□□□□ -1.23
VTI1B-203ENST00000554636 HMX1Q9NP08 348 aaPredicted RBP7.37□□□□□ -1.23
VTI1B-203ENST00000554636 DACH1Q9UI36 760 aa7.37□□□□□ -1.23
VTI1B-203ENST00000554636 CHD1O14646 1710 aa7.36□□□□□ -1.23
VTI1B-203ENST00000554636 AXIN1O15169 862 aa7.36□□□□□ -1.23
VTI1B-203ENST00000554636 VARSP26640 1264 aaKnown RBP7.36□□□□□ -1.23
VTI1B-203ENST00000554636 C4orf48Q5BLP8 95 aa7.36□□□□□ -1.23
VTI1B-203ENST00000554636 NBPF14Q5TI25 921 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms