RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 LIAT1Q6ZQX7 453 aa8.58□□□□□ -1.04
ATXN3-228ENST00000554592 USB1Q9BQ65 265 aaKnown RBP8.58□□□□□ -1.04
ATXN3-228ENST00000554592 GJA5P36382 358 aa8.57□□□□□ -1.04
ATXN3-228ENST00000554592 GPBP1L1Q9HC44 474 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-228ENST00000554592 KIAA0586Q9BVV6 1533 aa8.57□□□□□ -1.04
ATXN3-228ENST00000554592 TTBK1Q5TCY1 1321 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-228ENST00000554592 RSBN1LQ6PCB5 846 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-228ENST00000554592 Q6ZNB5 142 aa8.56□□□□□ -1.04
ATXN3-228ENST00000554592 IGF1RP08069 1367 aa8.56□□□□□ -1.04
ATXN3-228ENST00000554592 TOP2BQ02880 1626 aa8.55□□□□□ -1.04
ATXN3-228ENST00000554592 SPTLC1O15269 473 aa8.55□□□□□ -1.04
ATXN3-228ENST00000554592 DXOO77932 396 aaKnown RBP8.55□□□□□ -1.04
ATXN3-228ENST00000554592 SLC19A1P41440 591 aa8.55□□□□□ -1.04
ATXN3-228ENST00000554592 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
ATXN3-228ENST00000554592 KDM4CQ9H3R0 1056 aa8.55□□□□□ -1.04
ATXN3-228ENST00000554592 PLB1Q6P1J6 1458 aa8.54□□□□□ -1.04
ATXN3-228ENST00000554592 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
ATXN3-228ENST00000554592 PCDHB15Q9Y5E8 787 aa8.54□□□□□ -1.04
ATXN3-228ENST00000554592 ADCY10Q96PN6 1610 aa8.54□□□□□ -1.04
ATXN3-228ENST00000554592 ADGRL1O94910 1474 aa8.53□□□□□ -1.04
ATXN3-228ENST00000554592 TNIKQ9UKE5 1360 aa8.53□□□□□ -1.04
ATXN3-228ENST00000554592 NEUROD2Q15784 382 aa8.53□□□□□ -1.04
ATXN3-228ENST00000554592 TMEM132AQ24JP5 1023 aa8.53□□□□□ -1.04
ATXN3-228ENST00000554592 MYSM1Q5VVJ2 828 aa8.53□□□□□ -1.04
ATXN3-228ENST00000554592 SPRYD7Q5W111 196 aa8.53□□□□□ -1.04
ATXN3-228ENST00000554592 RETREG3Q86VR2 466 aa8.53□□□□□ -1.04
ATXN3-228ENST00000554592 ASXL2Q76L83 1435 aa8.53□□□□□ -1.04
ATXN3-228ENST00000554592 TRIM67Q6ZTA4 783 aa8.52□□□□□ -1.05
ATXN3-228ENST00000554592 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.05
ATXN3-228ENST00000554592 FBXO41Q8TF61 875 aa8.52□□□□□ -1.05
ATXN3-228ENST00000554592 FAM117AQ9C073 453 aa8.52□□□□□ -1.05
ATXN3-228ENST00000554592 LIMD1Q9UGP4 676 aa8.52□□□□□ -1.05
ATXN3-228ENST00000554592 CARMIL2Q6F5E8 1435 aa8.52□□□□□ -1.05
ATXN3-228ENST00000554592 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
ATXN3-228ENST00000554592 ABCC2Q92887 1545 aa8.51□□□□□ -1.05
ATXN3-228ENST00000554592 JUNDP17535 347 aa8.51□□□□□ -1.05
ATXN3-228ENST00000554592 COL17A1Q9UMD9 1497 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-228ENST00000554592 BIVM-ERCC5R4GMW8 1640 aa8.51□□□□□ -1.05
ATXN3-228ENST00000554592 PLEKHG3A1L390 1219 aa8.5□□□□□ -1.05
ATXN3-228ENST00000554592 C6orf229H3BNL8 230 aa8.5□□□□□ -1.05
ATXN3-228ENST00000554592 RPIAP49247 311 aa8.5□□□□□ -1.05
ATXN3-228ENST00000554592 TUSC1Q2TAM9 212 aa8.5□□□□□ -1.05
ATXN3-228ENST00000554592 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
ATXN3-228ENST00000554592 KIF27Q86VH2 1401 aa8.49□□□□□ -1.05
ATXN3-228ENST00000554592 MTMR2Q13614 643 aa8.49□□□□□ -1.05
ATXN3-228ENST00000554592 CARMIL1Q5VZK9 1371 aa8.48□□□□□ -1.05
ATXN3-228ENST00000554592 GLI2P10070 1586 aa8.48□□□□□ -1.05
ATXN3-228ENST00000554592 UACAQ9BZF9 1416 aa8.48□□□□□ -1.05
ATXN3-228ENST00000554592 HRCP23327 699 aa8.48□□□□□ -1.05
ATXN3-228ENST00000554592 PRPF38BQ5VTL8 546 aaKnown RBP8.48□□□□□ -1.05
ATXN3-228ENST00000554592 PRR7Q8TB68 274 aa8.48□□□□□ -1.05
ATXN3-228ENST00000554592 UHRF1BP1LA0JNW5 1464 aa8.47□□□□□ -1.05
ATXN3-228ENST00000554592 SPDYE5A6NIY4 337 aa8.47□□□□□ -1.05
ATXN3-228ENST00000554592 QPCTQ16769 361 aa8.47□□□□□ -1.05
ATXN3-228ENST00000554592 CABLES1Q8TDN4 633 aa8.47□□□□□ -1.05
ATXN3-228ENST00000554592 TEX14Q8IWB6 1497 aa8.46□□□□□ -1.05
ATXN3-228ENST00000554592 CFAP99D6REC4 459 aa8.46□□□□□ -1.06
ATXN3-228ENST00000554592 GDF9O60383 454 aa8.46□□□□□ -1.06
ATXN3-228ENST00000554592 GFRA3O60609 400 aa8.46□□□□□ -1.06
ATXN3-228ENST00000554592 LILRB3O75022 631 aa8.46□□□□□ -1.06
ATXN3-228ENST00000554592 ZNF697Q5TEC3 545 aa8.46□□□□□ -1.06
ATXN3-228ENST00000554592 DESI1Q6ICB0 168 aa8.46□□□□□ -1.06
ATXN3-228ENST00000554592 TSPOAP1O95153 1857 aa8.46□□□□□ -1.06
ATXN3-228ENST00000554592 EPRSP07814 1512 aaKnown RBP8.45□□□□□ -1.06
ATXN3-228ENST00000554592 HECW2Q9P2P5 1572 aa8.45□□□□□ -1.06
ATXN3-228ENST00000554592 CLK2P49760 499 aaKnown RBP8.45□□□□□ -1.06
ATXN3-228ENST00000554592 LAPTM4AQ15012 233 aa8.45□□□□□ -1.06
ATXN3-228ENST00000554592 FBXO31Q5XUX0 539 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-228ENST00000554592 PTCRAQ6ISU1 281 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-228ENST00000554592 DDRGK1Q96HY6 314 aa8.45□□□□□ -1.06
ATXN3-228ENST00000554592 RSPH6AQ9H0K4 717 aa8.45□□□□□ -1.06
ATXN3-228ENST00000554592 ZBTB3Q9H5J0 574 aa8.45□□□□□ -1.06
ATXN3-228ENST00000554592 PKD2L1Q9P0L9 805 aa8.45□□□□□ -1.06
ATXN3-228ENST00000554592 PRR20EP86478 221 aa8.44□□□□□ -1.06
ATXN3-228ENST00000554592 PRR20CP86479 221 aa8.44□□□□□ -1.06
ATXN3-228ENST00000554592 PRR20DP86480 221 aa8.44□□□□□ -1.06
ATXN3-228ENST00000554592 PRR20BP86481 221 aa8.44□□□□□ -1.06
ATXN3-228ENST00000554592 PRR20AP86496 221 aa8.44□□□□□ -1.06
ATXN3-228ENST00000554592 SH3D19Q5HYK7 790 aa8.44□□□□□ -1.06
ATXN3-228ENST00000554592 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
ATXN3-228ENST00000554592 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
ATXN3-228ENST00000554592 NRG2O14511 850 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-228ENST00000554592 LCE2BO14633 110 aa8.43□□□□□ -1.06
ATXN3-228ENST00000554592 SKIV2LQ15477 1246 aaKnown RBP8.43□□□□□ -1.06
ATXN3-228ENST00000554592 PTPRNQ16849 979 aa8.43□□□□□ -1.06
ATXN3-228ENST00000554592 CSPP1Q1MSJ5 1256 aa8.43□□□□□ -1.06
ATXN3-228ENST00000554592 NUDT12Q9BQG2 462 aa8.43□□□□□ -1.06
ATXN3-228ENST00000554592 PDZRN3Q9UPQ7 1066 aa8.43□□□□□ -1.06
ATXN3-228ENST00000554592 KDM5BQ9UGL1 1544 aa8.43□□□□□ -1.06
ATXN3-228ENST00000554592 CD2BP2O95400 341 aaKnown RBP8.42□□□□□ -1.06
ATXN3-228ENST00000554592 TRIM32Q13049 653 aa8.42□□□□□ -1.06
ATXN3-228ENST00000554592 RTL5Q5HYW3 569 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-228ENST00000554592 CCDC24Q8N4L8 307 aa8.42□□□□□ -1.06
ATXN3-228ENST00000554592 PROCA1Q8NCQ7 364 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-228ENST00000554592 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.42□□□□□ -1.06
ATXN3-228ENST00000554592 EVA1BQ9NVM1 165 aa8.42□□□□□ -1.06
ATXN3-228ENST00000554592 CD109Q6YHK3 1445 aa8.41□□□□□ -1.06
ATXN3-228ENST00000554592 LYPD8Q6UX82 237 aa8.41□□□□□ -1.06
ATXN3-228ENST00000554592 ZBTB24O43167 697 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-228ENST00000554592 CCNYL3P0C7X3 344 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms