RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-215ENST00000554567 FAM98CQ17RN3 349 aaKnown RBP38.82■■■■□ 3.8
KTN1-215ENST00000554567 STAC3Q96MF2 364 aa38.81■■■■□ 3.8
KTN1-215ENST00000554567 ALS2Q96Q42 1657 aa38.79■■■■□ 3.8
KTN1-215ENST00000554567 NRAPQ86VF7 1730 aa38.75■■■■□ 3.79
KTN1-215ENST00000554567 COL14A1Q05707 1796 aaKnown RBP38.73■■■■□ 3.79
KTN1-215ENST00000554567 NUDT16Q96DE0 195 aaKnown RBP38.73■■■■□ 3.79
KTN1-215ENST00000554567 PRDM11Q9NQV5 511 aa38.72■■■■□ 3.79
KTN1-215ENST00000554567 HRCP23327 699 aa38.7■■■■□ 3.79
KTN1-215ENST00000554567 ARHGEF28Q8N1W1 1705 aaKnown RBP38.68■■■■□ 3.78
KTN1-215ENST00000554567 FAM182BQ5T319 152 aa38.67■■■■□ 3.78
KTN1-215ENST00000554567 CDK19Q9BWU1 502 aa38.67■■■■□ 3.78
KTN1-215ENST00000554567 SPATA31A5Q5VU36 1347 aa38.66■■■■□ 3.78
KTN1-215ENST00000554567 SPATA31A7Q8IWB4 1347 aa38.66■■■■□ 3.78
KTN1-215ENST00000554567 BAG6P46379 1132 aa38.66■■■■□ 3.78
KTN1-215ENST00000554567 ATP7BP35670 1465 aa38.65■■■■□ 3.78
KTN1-215ENST00000554567 NUTM2GQ5VZR2 741 aa38.64■■■■□ 3.78
KTN1-215ENST00000554567 CHRNA2Q15822 529 aa38.63■■■■□ 3.77
KTN1-215ENST00000554567 ITSN1Q15811 1721 aa38.62■■■■□ 3.77
KTN1-215ENST00000554567 CRYBG1Q9Y4K1 1723 aa38.62■■■■□ 3.77
KTN1-215ENST00000554567 KIAA0232Q92628 1395 aa38.6■■■■□ 3.77
KTN1-215ENST00000554567 ZC3H6P61129 1189 aaKnown RBP38.59■■■■□ 3.77
KTN1-215ENST00000554567 STRN4Q9NRL3 753 aa38.59■■■■□ 3.77
KTN1-215ENST00000554567 PSDA5PKW4 1024 aaPredicted RBP38.57■■■■□ 3.76
KTN1-215ENST00000554567 ACEP12821 1306 aa38.57■■■■□ 3.76
KTN1-215ENST00000554567 EN1Q05925 392 aaPredicted RBP38.55■■■■□ 3.76
KTN1-215ENST00000554567 NBPF8Q3BBV2 869 aa38.55■■■■□ 3.76
KTN1-215ENST00000554567 CCDC61Q9Y6R9 512 aa38.55■■■■□ 3.76
KTN1-215ENST00000554567 NBPF1Q3BBV0 1214 aa38.52■■■■□ 3.76
KTN1-215ENST00000554567 SPATA31A1Q5TZJ5 1347 aa38.52■■■■□ 3.76
KTN1-215ENST00000554567 POLR3AO14802 1390 aaPredicted RBP38.5■■■■□ 3.75
KTN1-215ENST00000554567 USP35Q9P2H5 1018 aa38.5■■■■□ 3.75
KTN1-215ENST00000554567 EVA1CP58658 441 aa38.49■■■■□ 3.75
KTN1-215ENST00000554567 THSD7AQ9UPZ6 1657 aa38.49■■■■□ 3.75
KTN1-215ENST00000554567 PHRF1Q9P1Y6 1649 aaKnown RBP38.49■■■■□ 3.75
KTN1-215ENST00000554567 ABTB2Q8N961 1025 aa38.48■■■■□ 3.75
KTN1-215ENST00000554567 PLEKHG3A1L390 1219 aa38.47■■■■□ 3.75
KTN1-215ENST00000554567 RGPD1P0DJD0 1748 aa38.46■■■■□ 3.75
KTN1-215ENST00000554567 TOPAZ1Q8N9V7 1692 aa38.44■■■■□ 3.74
KTN1-215ENST00000554567 SRPK2P78362 688 aaKnown RBP38.44■■■■□ 3.74
KTN1-215ENST00000554567 KIAA1210Q9ULL0 1709 aa38.43■■■■□ 3.74
KTN1-215ENST00000554567 TRIM37O94972 964 aa38.41■■■■□ 3.74
KTN1-215ENST00000554567 FAM196AQ6ZSG2 479 aa38.4■■■■□ 3.74
KTN1-215ENST00000554567 EZH2Q15910 746 aaKnown RBP38.39■■■■□ 3.74
KTN1-215ENST00000554567 CABP2Q9NPB3 220 aa38.38■■■■□ 3.73
KTN1-215ENST00000554567 LRP5O75197 1615 aa38.38■■■■□ 3.73
KTN1-215ENST00000554567 CENPJQ9HC77 1338 aaPredicted RBP38.38■■■■□ 3.73
KTN1-215ENST00000554567 R3HDM1Q15032 1099 aaKnown RBP38.37■■■■□ 3.73
KTN1-215ENST00000554567 LARP1Q6PKG0 1096 aaKnown RBP38.37■■■■□ 3.73
KTN1-215ENST00000554567 SSH2Q76I76 1423 aa38.37■■■■□ 3.73
KTN1-215ENST00000554567 PPIP5K1Q6PFW1 1433 aa38.36■■■■□ 3.73
KTN1-215ENST00000554567 PDE3BQ13370 1112 aa38.35■■■■□ 3.73
KTN1-215ENST00000554567 NLRP13Q86W25 1043 aa38.35■■■■□ 3.73
KTN1-215ENST00000554567 TNS1Q9HBL0 1735 aaKnown RBP38.34■■■■□ 3.73
KTN1-215ENST00000554567 CAMTA1Q9Y6Y1 1673 aa38.33■■■■□ 3.73
KTN1-215ENST00000554567 NRKQ7Z2Y5 1582 aa38.33■■■■□ 3.73
KTN1-215ENST00000554567 BARGINQ6ZT62 677 aa38.33■■■■□ 3.73
KTN1-215ENST00000554567 DISP2A7MBM2 1401 aa38.32■■■■□ 3.73
KTN1-215ENST00000554567 APBA3O96018 575 aa38.32■■■■□ 3.72
KTN1-215ENST00000554567 USP19O94966 1318 aa38.32■■■■□ 3.72
KTN1-215ENST00000554567 GCP02774 474 aa38.31■■■■□ 3.72
KTN1-215ENST00000554567 TCP11L2Q8N4U5 519 aa38.3■■■■□ 3.72
KTN1-215ENST00000554567 CPDO75976 1380 aa38.3■■■■□ 3.72
KTN1-215ENST00000554567 ZBTB7CA1YPR0 619 aa38.29■■■■□ 3.72
KTN1-215ENST00000554567 CAMKK2Q96RR4 588 aa38.29■■■■□ 3.72
KTN1-215ENST00000554567 CABP1Q9NZU7 370 aa38.27■■■■□ 3.72
KTN1-215ENST00000554567 LMO7Q8WWI1 1683 aa38.23■■■■□ 3.71
KTN1-215ENST00000554567 NLRP6P59044 892 aa38.23■■■■□ 3.71
KTN1-215ENST00000554567 L3MBTL2Q969R5 705 aa38.22■■■■□ 3.71
KTN1-215ENST00000554567 QRICH2Q9H0J4 1663 aa38.22■■■■□ 3.71
KTN1-215ENST00000554567 THRAP3Q9Y2W1 955 aaKnown RBP38.2■■■■□ 3.71
KTN1-215ENST00000554567 BRD4O60885 1362 aaPredicted RBP38.18■■■■□ 3.7
KTN1-215ENST00000554567 USP6P35125 1406 aa38.17■■■■□ 3.7
KTN1-215ENST00000554567 COL5A2P05997 1499 aaPredicted RBP38.16■■■■□ 3.7
KTN1-215ENST00000554567 PARD3Q8TEW0 1356 aa38.15■■■■□ 3.7
KTN1-215ENST00000554567 SIN3AQ96ST3 1273 aa38.13■■■■□ 3.69
KTN1-215ENST00000554567 EVC2Q86UK5 1308 aa38.12■■■■□ 3.69
KTN1-215ENST00000554567 CRB1P82279 1406 aa38.12■■■■□ 3.69
KTN1-215ENST00000554567 NEUROD1Q13562 356 aa38.09■■■■□ 3.69
KTN1-215ENST00000554567 AATKQ6ZMQ8 1374 aa38.08■■■■□ 3.69
KTN1-215ENST00000554567 NBPF14Q5TI25 921 aa38.08■■■■□ 3.69
KTN1-215ENST00000554567 TOM1L2Q6ZVM7 507 aa38.08■■■■□ 3.69
KTN1-215ENST00000554567 PARP4Q9UKK3 1724 aaKnown RBP38.05■■■■□ 3.68
KTN1-215ENST00000554567 SLIT3O75094 1523 aa38.04■■■■□ 3.68
KTN1-215ENST00000554567 SOX12O15370 315 aa38.03■■■■□ 3.68
KTN1-215ENST00000554567 RREB1Q92766 1687 aa38.03■■■■□ 3.68
KTN1-215ENST00000554567 ROCK2O75116 1388 aaKnown RBP38.03■■■■□ 3.68
KTN1-215ENST00000554567 AXIN2Q9Y2T1 843 aa38.02■■■■□ 3.68
KTN1-215ENST00000554567 TRPM1Q7Z4N2 1603 aa38.01■■■■□ 3.68
KTN1-215ENST00000554567 DDB1Q16531 1140 aa38.01■■■■□ 3.68
KTN1-215ENST00000554567 PIK3C2AO00443 1686 aa38.01■■■■□ 3.67
KTN1-215ENST00000554567 NUP188Q5SRE5 1749 aa38.01■■■■□ 3.67
KTN1-215ENST00000554567 C11orf95C9JLR9 678 aaPredicted RBP38■■■■□ 3.67
KTN1-215ENST00000554567 ZNF692Q9BU19 519 aaPredicted RBP38■■■■□ 3.67
KTN1-215ENST00000554567 TTC21BQ7Z4L5 1316 aa37.99■■■■□ 3.67
KTN1-215ENST00000554567 OVOS2A0A0G2JMS6 1433 aa37.98■■■■□ 3.67
KTN1-215ENST00000554567 OVOS2A0A0J9YW53 1432 aa37.98■■■■□ 3.67
KTN1-215ENST00000554567 OVOS2Q6IE36 1432 aa37.98■■■■□ 3.67
KTN1-215ENST00000554567 WDR17Q8IZU2 1322 aa37.96■■■■□ 3.67
KTN1-215ENST00000554567 COL18A1P39060 1754 aa37.95■■■■□ 3.67
KTN1-215ENST00000554567 CSB-PGBD3P0DP91 1061 aa37.94■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms