RNA–Protein interactions for RNA: ENST00000554548.1

AL139317.1-201, humanhuman

TSL 3 BASIC

Gene AL139317.1, Length 196 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139317.1-201ENST00000554548 KIF7Q2M1P5 1343 aa16.61■□□□□ 0.25
AL139317.1-201ENST00000554548 ARHGEF10O15013 1369 aa16.61■□□□□ 0.25
AL139317.1-201ENST00000554548 CARD11Q9BXL7 1154 aa16.6■□□□□ 0.25
AL139317.1-201ENST00000554548 QRICH2Q9H0J4 1663 aa16.59■□□□□ 0.25
AL139317.1-201ENST00000554548 C11orf95C9JLR9 678 aaPredicted RBP16.59■□□□□ 0.25
AL139317.1-201ENST00000554548 ATP7BP35670 1465 aa16.59■□□□□ 0.25
AL139317.1-201ENST00000554548 ITSN1Q15811 1721 aa16.59■□□□□ 0.25
AL139317.1-201ENST00000554548 RBM6P78332 1123 aaKnown RBP16.58■□□□□ 0.24
AL139317.1-201ENST00000554548 FNBP4Q8N3X1 1017 aaPredicted RBP16.58■□□□□ 0.24
AL139317.1-201ENST00000554548 ACEP12821 1306 aa16.58■□□□□ 0.24
AL139317.1-201ENST00000554548 EVC2Q86UK5 1308 aa16.58■□□□□ 0.24
AL139317.1-201ENST00000554548 PLEKHG3A1L390 1219 aa16.57■□□□□ 0.24
AL139317.1-201ENST00000554548 TRPC5Q9UL62 973 aaPredicted RBP16.57■□□□□ 0.24
AL139317.1-201ENST00000554548 PPIP5K1Q6PFW1 1433 aa16.55■□□□□ 0.24
AL139317.1-201ENST00000554548 NUTM2GQ5VZR2 741 aa16.55■□□□□ 0.24
AL139317.1-201ENST00000554548 CABP1Q9NZU7 370 aa16.55■□□□□ 0.24
AL139317.1-201ENST00000554548 MARF1Q9Y4F3 1742 aaKnown RBP16.55■□□□□ 0.24
AL139317.1-201ENST00000554548 TRPM3Q9HCF6 1732 aaPredicted RBP16.54■□□□□ 0.24
AL139317.1-201ENST00000554548 POLR3AO14802 1390 aaPredicted RBP16.52■□□□□ 0.24
AL139317.1-201ENST00000554548 FAM83GA6ND36 823 aa16.52■□□□□ 0.24
AL139317.1-201ENST00000554548 UNC5CLQ8IV45 518 aa16.52■□□□□ 0.24
AL139317.1-201ENST00000554548 ABTB2Q8N961 1025 aa16.52■□□□□ 0.24
AL139317.1-201ENST00000554548 BCL9LQ86UU0 1499 aa16.52■□□□□ 0.23
AL139317.1-201ENST00000554548 TOPAZ1Q8N9V7 1692 aa16.51■□□□□ 0.23
AL139317.1-201ENST00000554548 CCDC9Q9Y3X0 531 aaKnown RBP16.51■□□□□ 0.23
AL139317.1-201ENST00000554548 ALS2Q96Q42 1657 aa16.5■□□□□ 0.23
AL139317.1-201ENST00000554548 ATRNO75882 1429 aa16.5■□□□□ 0.23
AL139317.1-201ENST00000554548 GJD4Q96KN9 370 aaPredicted RBP16.49■□□□□ 0.23
AL139317.1-201ENST00000554548 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
AL139317.1-201ENST00000554548 ABCA3Q99758 1704 aa16.48■□□□□ 0.23
AL139317.1-201ENST00000554548 RGS12O14924 1447 aa16.47■□□□□ 0.23
AL139317.1-201ENST00000554548 ZC3H6P61129 1189 aaKnown RBP16.47■□□□□ 0.23
AL139317.1-201ENST00000554548 BTG4Q9NY30 223 aa16.47■□□□□ 0.23
AL139317.1-201ENST00000554548 GTF3C3Q9Y5Q9 886 aa16.47■□□□□ 0.23
AL139317.1-201ENST00000554548 SLIT2O94813 1529 aa16.46■□□□□ 0.23
AL139317.1-201ENST00000554548 ST20-MTHFSA0A0A6YYL1 179 aa16.46■□□□□ 0.23
AL139317.1-201ENST00000554548 TMC1Q8TDI8 760 aa16.46■□□□□ 0.23
AL139317.1-201ENST00000554548 PRDM11Q9NQV5 511 aa16.46■□□□□ 0.23
AL139317.1-201ENST00000554548 NLRP13Q86W25 1043 aa16.45■□□□□ 0.22
AL139317.1-201ENST00000554548 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
AL139317.1-201ENST00000554548 PRKRIP1Q9H875 184 aaPredicted RBP16.45■□□□□ 0.22
AL139317.1-201ENST00000554548 ATAD2Q6PL18 1390 aa16.44■□□□□ 0.22
AL139317.1-201ENST00000554548 NLRP6P59044 892 aa16.44■□□□□ 0.22
AL139317.1-201ENST00000554548 CHRNA2Q15822 529 aa16.44■□□□□ 0.22
AL139317.1-201ENST00000554548 VPS72Q15906 364 aa16.44■□□□□ 0.22
AL139317.1-201ENST00000554548 PLCH1Q4KWH8 1693 aa16.43■□□□□ 0.22
AL139317.1-201ENST00000554548 KIAA0232Q92628 1395 aa16.43■□□□□ 0.22
AL139317.1-201ENST00000554548 ZBTB7CA1YPR0 619 aa16.43■□□□□ 0.22
AL139317.1-201ENST00000554548 UPF1Q92900 1129 aaKnown RBP eCLIP16.43■□□□□ 0.22
AL139317.1-201ENST00000554548 SBNO2Q9Y2G9 1366 aa16.42■□□□□ 0.22
AL139317.1-201ENST00000554548 USP6P35125 1406 aa16.42■□□□□ 0.22
AL139317.1-201ENST00000554548 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.42■□□□□ 0.22
AL139317.1-201ENST00000554548 COL14A1Q05707 1796 aaKnown RBP16.41■□□□□ 0.22
AL139317.1-201ENST00000554548 BRD4O60885 1362 aaPredicted RBP16.41■□□□□ 0.22
AL139317.1-201ENST00000554548 A0A0G2JS52 829 aa16.41■□□□□ 0.22
AL139317.1-201ENST00000554548 EVA1CP58658 441 aa16.41■□□□□ 0.22
AL139317.1-201ENST00000554548 MYT1Q01538 1121 aa16.41■□□□□ 0.22
AL139317.1-201ENST00000554548 NWD2Q9ULI1 1742 aa16.41■□□□□ 0.22
AL139317.1-201ENST00000554548 KTN1Q86UP2 1357 aaKnown RBP16.4■□□□□ 0.22
AL139317.1-201ENST00000554548 GCP02774 474 aa16.4■□□□□ 0.22
AL139317.1-201ENST00000554548 TESK2Q96S53 571 aa16.4■□□□□ 0.22
AL139317.1-201ENST00000554548 STRN4Q9NRL3 753 aa16.4■□□□□ 0.22
AL139317.1-201ENST00000554548 TTC21BQ7Z4L5 1316 aa16.4■□□□□ 0.22
AL139317.1-201ENST00000554548 CRYBG1Q9Y4K1 1723 aa16.39■□□□□ 0.21
AL139317.1-201ENST00000554548 PHRF1Q9P1Y6 1649 aaKnown RBP16.39■□□□□ 0.21
AL139317.1-201ENST00000554548 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
AL139317.1-201ENST00000554548 HDGFL2Q7Z4V5 671 aaPredicted RBP16.39■□□□□ 0.21
AL139317.1-201ENST00000554548 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
AL139317.1-201ENST00000554548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.38■□□□□ 0.21
AL139317.1-201ENST00000554548 SEPT12Q8IYM1 358 aa16.38■□□□□ 0.21
AL139317.1-201ENST00000554548 USP19O94966 1318 aa16.38■□□□□ 0.21
AL139317.1-201ENST00000554548 GLI3P10071 1580 aa16.38■□□□□ 0.21
AL139317.1-201ENST00000554548 SOX12O15370 315 aa16.37■□□□□ 0.21
AL139317.1-201ENST00000554548 FAM98CQ17RN3 349 aaKnown RBP16.37■□□□□ 0.21
AL139317.1-201ENST00000554548 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
AL139317.1-201ENST00000554548 TTC21AQ8NDW8 1320 aa16.36■□□□□ 0.21
AL139317.1-201ENST00000554548 CPSF1Q10570 1443 aaKnown RBP16.36■□□□□ 0.21
AL139317.1-201ENST00000554548 SSH2Q76I76 1423 aa16.36■□□□□ 0.21
AL139317.1-201ENST00000554548 TMF1P82094 1093 aa16.35■□□□□ 0.21
AL139317.1-201ENST00000554548 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
AL139317.1-201ENST00000554548 AKAP12Q02952 1782 aa16.35■□□□□ 0.21
AL139317.1-201ENST00000554548 MYOM1P52179 1685 aa16.34■□□□□ 0.21
AL139317.1-201ENST00000554548 NRAPQ86VF7 1730 aa16.34■□□□□ 0.21
AL139317.1-201ENST00000554548 USP35Q9P2H5 1018 aa16.34■□□□□ 0.21
AL139317.1-201ENST00000554548 SPATA31A5Q5VU36 1347 aa16.34■□□□□ 0.21
AL139317.1-201ENST00000554548 SPATA31A7Q8IWB4 1347 aa16.34■□□□□ 0.21
AL139317.1-201ENST00000554548 ONECUT3O60422 494 aaPredicted RBP16.33■□□□□ 0.2
AL139317.1-201ENST00000554548 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
AL139317.1-201ENST00000554548 CPDO75976 1380 aa16.33■□□□□ 0.2
AL139317.1-201ENST00000554548 NRKQ7Z2Y5 1582 aa16.33■□□□□ 0.2
AL139317.1-201ENST00000554548 PIK3C2AO00443 1686 aa16.33■□□□□ 0.2
AL139317.1-201ENST00000554548 KRT27Q7Z3Y8 459 aa16.32■□□□□ 0.2
AL139317.1-201ENST00000554548 NME9Q86XW9 330 aa16.32■□□□□ 0.2
AL139317.1-201ENST00000554548 KCNH5Q8NCM2 988 aa16.32■□□□□ 0.2
AL139317.1-201ENST00000554548 LARP1Q6PKG0 1096 aaKnown RBP16.31■□□□□ 0.2
AL139317.1-201ENST00000554548 POLR3GLQ9BT43 218 aa16.31■□□□□ 0.2
AL139317.1-201ENST00000554548 SPATA31A1Q5TZJ5 1347 aa16.3■□□□□ 0.2
AL139317.1-201ENST00000554548 CAMTA1Q9Y6Y1 1673 aa16.3■□□□□ 0.2
AL139317.1-201ENST00000554548 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
AL139317.1-201ENST00000554548 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms