RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ARMC2Q8NEN0 867 aa10.45□□□□□ -0.74
SCFD1-211ENST00000554437 ZNF787Q6DD87 383 aa10.44□□□□□ -0.74
SCFD1-211ENST00000554437 C14orf37Q86TY3 774 aa10.44□□□□□ -0.74
SCFD1-211ENST00000554437 GDPD2Q9HCC8 539 aa10.44□□□□□ -0.74
SCFD1-211ENST00000554437 TBC1D2BQ9UPU7 963 aa10.44□□□□□ -0.74
SCFD1-211ENST00000554437 LIAT1Q6ZQX7 453 aa10.43□□□□□ -0.74
SCFD1-211ENST00000554437 FKBPLQ9UIM3 349 aa10.43□□□□□ -0.74
SCFD1-211ENST00000554437 SLC19A1P41440 591 aa10.42□□□□□ -0.74
SCFD1-211ENST00000554437 RPIAP49247 311 aa10.42□□□□□ -0.74
SCFD1-211ENST00000554437 TRIM32Q13049 653 aa10.42□□□□□ -0.74
SCFD1-211ENST00000554437 BAP1Q92560 729 aa10.42□□□□□ -0.74
SCFD1-211ENST00000554437 ZNF775Q96BV0 537 aaPredicted RBP10.42□□□□□ -0.74
SCFD1-211ENST00000554437 POM121Q96HA1 1249 aa10.42□□□□□ -0.74
SCFD1-211ENST00000554437 COG6Q9Y2V7 657 aa10.42□□□□□ -0.74
SCFD1-211ENST00000554437 CD2BP2O95400 341 aaKnown RBP10.41□□□□□ -0.74
SCFD1-211ENST00000554437 ABL2P42684 1182 aa10.41□□□□□ -0.74
SCFD1-211ENST00000554437 LINC01559Q495D7 138 aa10.41□□□□□ -0.74
SCFD1-211ENST00000554437 NBPF14Q5TI25 921 aa10.41□□□□□ -0.74
SCFD1-211ENST00000554437 EMID1Q96A84 441 aaPredicted RBP10.41□□□□□ -0.74
SCFD1-211ENST00000554437 CLUAP1Q96AJ1 413 aa10.41□□□□□ -0.74
SCFD1-211ENST00000554437 NRG2O14511 850 aaPredicted RBP10.4□□□□□ -0.74
SCFD1-211ENST00000554437 PRKD2Q9BZL6 878 aa10.4□□□□□ -0.74
SCFD1-211ENST00000554437 ERICH6Q7L0X2 663 aa10.39□□□□□ -0.75
SCFD1-211ENST00000554437 ZC3H4Q9UPT8 1303 aaKnown RBP10.38□□□□□ -0.75
SCFD1-211ENST00000554437 GPKOWQ92917 476 aaPredicted RBP eCLIP10.38□□□□□ -0.75
SCFD1-211ENST00000554437 ZNF511Q8NB15 262 aa10.37□□□□□ -0.75
SCFD1-211ENST00000554437 SH3BP2P78314 561 aa10.36□□□□□ -0.75
SCFD1-211ENST00000554437 AGERQ15109 404 aa10.36□□□□□ -0.75
SCFD1-211ENST00000554437 SPRYD7Q5W111 196 aa10.36□□□□□ -0.75
SCFD1-211ENST00000554437 PDXDC2PQ6P474 469 aa10.36□□□□□ -0.75
SCFD1-211ENST00000554437 ZMYND15Q9H091 742 aa10.36□□□□□ -0.75
SCFD1-211ENST00000554437 V9GY48 417 aaPredicted RBP10.36□□□□□ -0.75
SCFD1-211ENST00000554437 GPR37L1O60883 481 aa10.35□□□□□ -0.75
SCFD1-211ENST00000554437 WNT7BP56706 349 aa10.35□□□□□ -0.75
SCFD1-211ENST00000554437 WWC1Q8IX03 1113 aa10.35□□□□□ -0.75
SCFD1-211ENST00000554437 TIMELESSQ9UNS1 1208 aa10.35□□□□□ -0.75
SCFD1-211ENST00000554437 A6NJR5 290 aa10.34□□□□□ -0.75
SCFD1-211ENST00000554437 PTK2Q05397 1052 aa10.34□□□□□ -0.75
SCFD1-211ENST00000554437 IRF5Q13568 498 aa10.34□□□□□ -0.75
SCFD1-211ENST00000554437 BPHLQ86WA6 291 aaPredicted RBP10.34□□□□□ -0.75
SCFD1-211ENST00000554437 FOXJ1Q92949 421 aa10.34□□□□□ -0.75
SCFD1-211ENST00000554437 SKOR1P84550 965 aa10.33□□□□□ -0.76
SCFD1-211ENST00000554437 ZNF697Q5TEC3 545 aa10.33□□□□□ -0.76
SCFD1-211ENST00000554437 ZNF598Q86UK7 904 aaKnown RBP10.33□□□□□ -0.76
SCFD1-211ENST00000554437 PROSER2Q86WR7 435 aaPredicted RBP10.33□□□□□ -0.76
SCFD1-211ENST00000554437 ARHGAP9Q9BRR9 750 aa10.33□□□□□ -0.76
SCFD1-211ENST00000554437 MAGEB6P1A0A0J9YX57 407 aa10.32□□□□□ -0.76
SCFD1-211ENST00000554437 ZBBXA8MT70 800 aa10.32□□□□□ -0.76
SCFD1-211ENST00000554437 SH3BP5LQ7L8J4 393 aa10.32□□□□□ -0.76
SCFD1-211ENST00000554437 CARD14Q9BXL6 1004 aa10.32□□□□□ -0.76
SCFD1-211ENST00000554437 GPSM3Q9Y4H4 160 aa10.32□□□□□ -0.76
SCFD1-211ENST00000554437 FBXO45P0C2W1 286 aa10.31□□□□□ -0.76
SCFD1-211ENST00000554437 RC3H1Q5TC82 1133 aaKnown RBP10.31□□□□□ -0.76
SCFD1-211ENST00000554437 NR1H3Q13133 447 aa10.3□□□□□ -0.76
SCFD1-211ENST00000554437 WASHC4Q2M389 1173 aa10.3□□□□□ -0.76
SCFD1-211ENST00000554437 SH3RF1Q7Z6J0 888 aa10.3□□□□□ -0.76
SCFD1-211ENST00000554437 ZBTB33Q86T24 672 aa10.3□□□□□ -0.76
SCFD1-211ENST00000554437 EHBP1Q8NDI1 1231 aa10.3□□□□□ -0.76
SCFD1-211ENST00000554437 VAC14Q08AM6 782 aa10.29□□□□□ -0.76
SCFD1-211ENST00000554437 ZNF330Q9Y3S2 320 aaPredicted RBP10.29□□□□□ -0.76
SCFD1-211ENST00000554437 VARSP26640 1264 aaKnown RBP10.28□□□□□ -0.76
SCFD1-211ENST00000554437 FOXC1Q12948 553 aa10.28□□□□□ -0.76
SCFD1-211ENST00000554437 C4orf48Q5BLP8 95 aa10.28□□□□□ -0.76
SCFD1-211ENST00000554437 FNBP4Q8N3X1 1017 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-211ENST00000554437 ADAM32Q8TC27 787 aa10.28□□□□□ -0.76
SCFD1-211ENST00000554437 OCSTAMPQ9BR26 566 aa10.28□□□□□ -0.76
SCFD1-211ENST00000554437 WNT7AO00755 349 aa10.27□□□□□ -0.77
SCFD1-211ENST00000554437 TRAK2O60296 914 aa10.26□□□□□ -0.77
SCFD1-211ENST00000554437 ERFEQ4G0M1 354 aa10.25□□□□□ -0.77
SCFD1-211ENST00000554437 FAM174AQ8TBP5 190 aa10.25□□□□□ -0.77
SCFD1-211ENST00000554437 MRGPRX2Q96LB1 330 aa10.25□□□□□ -0.77
SCFD1-211ENST00000554437 EIF4G2P78344 907 aaKnown RBP eCLIP10.24□□□□□ -0.77
SCFD1-211ENST00000554437 PKD2L1Q9P0L9 805 aa10.24□□□□□ -0.77
SCFD1-211ENST00000554437 PDZRN3Q9UPQ7 1066 aa10.24□□□□□ -0.77
SCFD1-211ENST00000554437 PCDHB9Q9Y5E1 797 aa10.24□□□□□ -0.77
SCFD1-211ENST00000554437 DZIP3Q86Y13 1208 aaKnown RBP10.23□□□□□ -0.77
SCFD1-211ENST00000554437 C1QTNF2Q9BXJ5 285 aa10.23□□□□□ -0.77
SCFD1-211ENST00000554437 POM121CA8CG34 1229 aa10.22□□□□□ -0.77
SCFD1-211ENST00000554437 TNFRSF10AO00220 468 aa10.22□□□□□ -0.77
SCFD1-211ENST00000554437 SLC10A4Q96EP9 437 aa10.22□□□□□ -0.77
SCFD1-211ENST00000554437 SIAH2O43255 324 aa10.21□□□□□ -0.77
SCFD1-211ENST00000554437 GDF9O60383 454 aa10.21□□□□□ -0.77
SCFD1-211ENST00000554437 ARID5BQ14865 1188 aa10.21□□□□□ -0.77
SCFD1-211ENST00000554437 ZNF777Q9ULD5 760 aaPredicted RBP10.21□□□□□ -0.77
SCFD1-211ENST00000554437 SEMA3FQ13275 785 aa10.2□□□□□ -0.78
SCFD1-211ENST00000554437 TRMT44Q8IYL2 757 aaKnown RBP10.2□□□□□ -0.78
SCFD1-211ENST00000554437 ZNF592Q92610 1267 aa10.2□□□□□ -0.78
SCFD1-211ENST00000554437 SOX11P35716 441 aa10.19□□□□□ -0.78
SCFD1-211ENST00000554437 MCCD1P59942 119 aaPredicted RBP10.19□□□□□ -0.78
SCFD1-211ENST00000554437 TLL2Q9Y6L7 1015 aa10.19□□□□□ -0.78
SCFD1-211ENST00000554437 TTC24A2A3L6 582 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-211ENST00000554437 TRIM67Q6ZTA4 783 aa10.18□□□□□ -0.78
SCFD1-211ENST00000554437 VASH1Q7L8A9 365 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-211ENST00000554437 CYP4X1Q8N118 509 aa10.18□□□□□ -0.78
SCFD1-211ENST00000554437 SNIP1Q8TAD8 396 aaKnown RBP10.18□□□□□ -0.78
SCFD1-211ENST00000554437 CDV3Q9UKY7 258 aaKnown RBP10.18□□□□□ -0.78
SCFD1-211ENST00000554437 ALDH1A1P00352 501 aa10.17□□□□□ -0.78
SCFD1-211ENST00000554437 PRR20EP86478 221 aa10.17□□□□□ -0.78
SCFD1-211ENST00000554437 PRR20CP86479 221 aa10.17□□□□□ -0.78
SCFD1-211ENST00000554437 PRR20DP86480 221 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms