RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 GGCXP38435 758 aa9.98□□□□□ -0.81
CHD8-207ENST00000554384 SPSB2Q99619 263 aa9.98□□□□□ -0.81
CHD8-207ENST00000554384 PDZRN3Q9UPQ7 1066 aa9.98□□□□□ -0.81
CHD8-207ENST00000554384 DESI1Q6ICB0 168 aa9.97□□□□□ -0.81
CHD8-207ENST00000554384 JUNDP17535 347 aa9.96□□□□□ -0.82
CHD8-207ENST00000554384 ARXQ96QS3 562 aa9.96□□□□□ -0.82
CHD8-207ENST00000554384 PRM3Q9NNZ6 103 aa9.96□□□□□ -0.82
CHD8-207ENST00000554384 MAP10Q9P2G4 905 aa9.96□□□□□ -0.82
CHD8-207ENST00000554384 VAC14Q08AM6 782 aa9.95□□□□□ -0.82
CHD8-207ENST00000554384 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
CHD8-207ENST00000554384 PPEF1O14829 653 aaPredicted RBP9.94□□□□□ -0.82
CHD8-207ENST00000554384 ADAMTS19Q8TE59 1207 aa9.93□□□□□ -0.82
CHD8-207ENST00000554384 F12P00748 615 aaPredicted RBP9.92□□□□□ -0.82
CHD8-207ENST00000554384 SLC19A1P41440 591 aa9.92□□□□□ -0.82
CHD8-207ENST00000554384 DXOO77932 396 aaKnown RBP9.91□□□□□ -0.82
CHD8-207ENST00000554384 S1PR4O95977 384 aa9.91□□□□□ -0.82
CHD8-207ENST00000554384 CTHP32929 405 aa9.91□□□□□ -0.82
CHD8-207ENST00000554384 MSS51Q4VC12 460 aa9.91□□□□□ -0.82
CHD8-207ENST00000554384 PTPRNQ16849 979 aa9.9□□□□□ -0.82
CHD8-207ENST00000554384 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
CHD8-207ENST00000554384 HOMEZQ8IX15 550 aa9.9□□□□□ -0.82
CHD8-207ENST00000554384 GLMNQ92990 594 aa9.9□□□□□ -0.82
CHD8-207ENST00000554384 ADH1BP00325 375 aa9.89□□□□□ -0.83
CHD8-207ENST00000554384 MMP16P51512 607 aa9.89□□□□□ -0.83
CHD8-207ENST00000554384 HDGFL1Q5TGJ6 251 aa9.89□□□□□ -0.83
CHD8-207ENST00000554384 LIAT1Q6ZQX7 453 aa9.89□□□□□ -0.83
CHD8-207ENST00000554384 CALR3Q96L12 384 aaKnown RBP9.89□□□□□ -0.83
CHD8-207ENST00000554384 NUDT12Q9BQG2 462 aa9.89□□□□□ -0.83
CHD8-207ENST00000554384 SPRYD7Q5W111 196 aa9.88□□□□□ -0.83
CHD8-207ENST00000554384 PTCRAQ6ISU1 281 aaPredicted RBP9.88□□□□□ -0.83
CHD8-207ENST00000554384 ANKLE1Q8NAG6 615 aa9.88□□□□□ -0.83
CHD8-207ENST00000554384 CCNYL3P0C7X3 344 aa9.87□□□□□ -0.83
CHD8-207ENST00000554384 CCDC24Q8N4L8 307 aa9.87□□□□□ -0.83
CHD8-207ENST00000554384 CCDC97Q96F63 343 aaPredicted RBP9.87□□□□□ -0.83
CHD8-207ENST00000554384 EVA1BQ9NVM1 165 aa9.87□□□□□ -0.83
CHD8-207ENST00000554384 ZNF787Q6DD87 383 aa9.86□□□□□ -0.83
CHD8-207ENST00000554384 FKBPLQ9UIM3 349 aa9.86□□□□□ -0.83
CHD8-207ENST00000554384 FBXO45P0C2W1 286 aa9.85□□□□□ -0.83
CHD8-207ENST00000554384 KCNH2Q12809 1159 aa9.85□□□□□ -0.83
CHD8-207ENST00000554384 WASHC4Q2M389 1173 aa9.85□□□□□ -0.83
CHD8-207ENST00000554384 PLA2G2CQ5R387 149 aa9.85□□□□□ -0.83
CHD8-207ENST00000554384 ZNF598Q86UK7 904 aaKnown RBP9.85□□□□□ -0.83
CHD8-207ENST00000554384 SLC6A16Q9GZN6 736 aa9.85□□□□□ -0.83
CHD8-207ENST00000554384 SERPINA10Q9UK55 444 aa9.85□□□□□ -0.83
CHD8-207ENST00000554384 ALG2Q9H553 416 aa9.83□□□□□ -0.84
CHD8-207ENST00000554384 PRR20EP86478 221 aa9.81□□□□□ -0.84
CHD8-207ENST00000554384 PRR20CP86479 221 aa9.81□□□□□ -0.84
CHD8-207ENST00000554384 PRR20DP86480 221 aa9.81□□□□□ -0.84
CHD8-207ENST00000554384 PRR20BP86481 221 aa9.81□□□□□ -0.84
CHD8-207ENST00000554384 PRR20AP86496 221 aa9.81□□□□□ -0.84
CHD8-207ENST00000554384 ZNF697Q5TEC3 545 aa9.81□□□□□ -0.84
CHD8-207ENST00000554384 OCSTAMPQ9BR26 566 aa9.81□□□□□ -0.84
CHD8-207ENST00000554384 GDF9O60383 454 aa9.8□□□□□ -0.84
CHD8-207ENST00000554384 MYT1Q01538 1121 aa9.8□□□□□ -0.84
CHD8-207ENST00000554384 NR1H3Q13133 447 aa9.8□□□□□ -0.84
CHD8-207ENST00000554384 UNC93B1Q9H1C4 597 aa9.8□□□□□ -0.84
CHD8-207ENST00000554384 ZBBXA8MT70 800 aa9.79□□□□□ -0.84
CHD8-207ENST00000554384 TNFRSF10AO00220 468 aa9.79□□□□□ -0.84
CHD8-207ENST00000554384 FCF1Q9Y324 198 aaKnown RBP9.79□□□□□ -0.84
CHD8-207ENST00000554384 RFX1P22670 979 aa9.78□□□□□ -0.84
CHD8-207ENST00000554384 PKDCCQ504Y2 493 aa9.78□□□□□ -0.84
CHD8-207ENST00000554384 PNMA1Q8ND90 353 aa9.78□□□□□ -0.84
CHD8-207ENST00000554384 ZNF775Q96BV0 537 aaPredicted RBP9.78□□□□□ -0.84
CHD8-207ENST00000554384 SEMA3FQ13275 785 aa9.77□□□□□ -0.85
CHD8-207ENST00000554384 LINC01559Q495D7 138 aa9.77□□□□□ -0.85
CHD8-207ENST00000554384 UCN2Q96RP3 112 aa9.77□□□□□ -0.85
CHD8-207ENST00000554384 POTECB2RU33 542 aa9.76□□□□□ -0.85
CHD8-207ENST00000554384 DGAT1O75907 488 aa9.76□□□□□ -0.85
CHD8-207ENST00000554384 BAP1Q92560 729 aa9.76□□□□□ -0.85
CHD8-207ENST00000554384 PIK3CDO00329 1044 aa9.75□□□□□ -0.85
CHD8-207ENST00000554384 CFAP70Q5T0N1 1121 aa9.75□□□□□ -0.85
CHD8-207ENST00000554384 TFIP11Q9UBB9 837 aaKnown RBP9.75□□□□□ -0.85
CHD8-207ENST00000554384 EIF4G2P78344 907 aaKnown RBP eCLIP9.74□□□□□ -0.85
CHD8-207ENST00000554384 PDXDC2PQ6P474 469 aa9.74□□□□□ -0.85
CHD8-207ENST00000554384 TBC1D9Q6ZT07 1266 aa9.74□□□□□ -0.85
CHD8-207ENST00000554384 FOXJ1Q92949 421 aa9.74□□□□□ -0.85
CHD8-207ENST00000554384 PPP1R12CQ9BZL4 782 aa9.74□□□□□ -0.85
CHD8-207ENST00000554384 ZC3H4Q9UPT8 1303 aaKnown RBP9.74□□□□□ -0.85
CHD8-207ENST00000554384 PALM3A6NDB9 673 aaPredicted RBP9.73□□□□□ -0.85
CHD8-207ENST00000554384 FAM187AA6NFU0 413 aa9.73□□□□□ -0.85
CHD8-207ENST00000554384 PTK2Q05397 1052 aa9.73□□□□□ -0.85
CHD8-207ENST00000554384 ARMC2Q8NEN0 867 aa9.73□□□□□ -0.85
CHD8-207ENST00000554384 PKD2L1Q9P0L9 805 aa9.73□□□□□ -0.85
CHD8-207ENST00000554384 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.72□□□□□ -0.85
CHD8-207ENST00000554384 CDCA8Q53HL2 280 aa9.72□□□□□ -0.85
CHD8-207ENST00000554384 ADAM32Q8TC27 787 aa9.72□□□□□ -0.85
CHD8-207ENST00000554384 ARHGAP9Q9BRR9 750 aa9.72□□□□□ -0.85
CHD8-207ENST00000554384 CARD14Q9BXL6 1004 aa9.72□□□□□ -0.85
CHD8-207ENST00000554384 PCDHB9Q9Y5E1 797 aa9.72□□□□□ -0.85
CHD8-207ENST00000554384 LMOD1P29536 600 aaPredicted RBP9.71□□□□□ -0.86
CHD8-207ENST00000554384 SOX11P35716 441 aa9.71□□□□□ -0.86
CHD8-207ENST00000554384 FOXC1Q12948 553 aa9.71□□□□□ -0.86
CHD8-207ENST00000554384 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.86
CHD8-207ENST00000554384 NBPF14Q5TI25 921 aa9.71□□□□□ -0.86
CHD8-207ENST00000554384 SH3BP5LQ7L8J4 393 aa9.71□□□□□ -0.86
CHD8-207ENST00000554384 MAGEB6P1A0A0J9YX57 407 aa9.7□□□□□ -0.86
CHD8-207ENST00000554384 ST8SIA5O15466 376 aa9.69□□□□□ -0.86
CHD8-207ENST00000554384 FAM174AQ8TBP5 190 aa9.69□□□□□ -0.86
CHD8-207ENST00000554384 GPKOWQ92917 476 aaPredicted RBP eCLIP9.69□□□□□ -0.86
CHD8-207ENST00000554384 GPSM3Q9Y4H4 160 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms