RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 PLEKHH1Q9ULM0 1364 aa25.69■■□□□ 1.7
NEK9-204ENST00000554258 NRXN1Q9ULB1 1477 aa25.68■■□□□ 1.7
NEK9-204ENST00000554258 KNDC1Q76NI1 1749 aa25.67■■□□□ 1.7
NEK9-204ENST00000554258 SPATA31A1Q5TZJ5 1347 aa25.65■■□□□ 1.7
NEK9-204ENST00000554258 MYOM1P52179 1685 aa25.64■■□□□ 1.7
NEK9-204ENST00000554258 PDE3BQ13370 1112 aa25.63■■□□□ 1.69
NEK9-204ENST00000554258 ABCC11Q96J66 1382 aa25.63■■□□□ 1.69
NEK9-204ENST00000554258 CASZ1Q86V15 1759 aa25.62■■□□□ 1.69
NEK9-204ENST00000554258 GIGYF1O75420 1035 aaPredicted RBP25.61■■□□□ 1.69
NEK9-204ENST00000554258 PRDM11Q9NQV5 511 aa25.6■■□□□ 1.69
NEK9-204ENST00000554258 TRPM3Q9HCF6 1732 aaPredicted RBP25.6■■□□□ 1.69
NEK9-204ENST00000554258 ALS2Q96Q42 1657 aa25.59■■□□□ 1.69
NEK9-204ENST00000554258 TMEM132EQ6IEE7 984 aa25.57■■□□□ 1.68
NEK9-204ENST00000554258 PMFBP1Q8TBY8 1022 aa25.57■■□□□ 1.68
NEK9-204ENST00000554258 ZBTB7AO95365 584 aa25.56■■□□□ 1.68
NEK9-204ENST00000554258 ITGAEP38570 1179 aa25.56■■□□□ 1.68
NEK9-204ENST00000554258 STRN4Q9NRL3 753 aa25.56■■□□□ 1.68
NEK9-204ENST00000554258 USP35Q9P2H5 1018 aa25.55■■□□□ 1.68
NEK9-204ENST00000554258 ADGRF5Q8IZF2 1346 aa25.55■■□□□ 1.68
NEK9-204ENST00000554258 CRYBG1Q9Y4K1 1723 aa25.54■■□□□ 1.68
NEK9-204ENST00000554258 SYT17Q9BSW7 474 aa25.54■■□□□ 1.68
NEK9-204ENST00000554258 FHDC1Q9C0D6 1143 aaPredicted RBP25.54■■□□□ 1.68
NEK9-204ENST00000554258 RGPD3A6NKT7 1758 aaPredicted RBP25.52■■□□□ 1.68
NEK9-204ENST00000554258 RGPD4Q7Z3J3 1758 aa25.52■■□□□ 1.68
NEK9-204ENST00000554258 PTGER2P43116 358 aa25.52■■□□□ 1.68
NEK9-204ENST00000554258 PDGFDQ9GZP0 370 aaPredicted RBP25.52■■□□□ 1.68
NEK9-204ENST00000554258 ANO8Q9HCE9 1232 aaPredicted RBP25.52■■□□□ 1.68
NEK9-204ENST00000554258 YTHDC2Q9H6S0 1430 aaKnown RBP25.51■■□□□ 1.67
NEK9-204ENST00000554258 GPRASP1Q5JY77 1395 aa25.5■■□□□ 1.67
NEK9-204ENST00000554258 ATF5Q9Y2D1 282 aaPredicted RBP25.5■■□□□ 1.67
NEK9-204ENST00000554258 BARGINQ6ZT62 677 aa25.49■■□□□ 1.67
NEK9-204ENST00000554258 CHRNA2Q15822 529 aa25.48■■□□□ 1.67
NEK9-204ENST00000554258 DLC1Q96QB1 1528 aa25.47■■□□□ 1.67
NEK9-204ENST00000554258 KIAA0232Q92628 1395 aa25.47■■□□□ 1.67
NEK9-204ENST00000554258 ANKARQ7Z5J8 1434 aa25.46■■□□□ 1.67
NEK9-204ENST00000554258 SIRT1Q96EB6 747 aa25.46■■□□□ 1.67
NEK9-204ENST00000554258 GOLGB1Q14789 3259 aaKnown RBP25.44■■□□□ 1.66
NEK9-204ENST00000554258 EVA1CP58658 441 aa25.44■■□□□ 1.66
NEK9-204ENST00000554258 BCL11BQ9C0K0 894 aaPredicted RBP25.44■■□□□ 1.66
NEK9-204ENST00000554258 C11orf95C9JLR9 678 aaPredicted RBP25.43■■□□□ 1.66
NEK9-204ENST00000554258 PLSCR1O15162 318 aa25.43■■□□□ 1.66
NEK9-204ENST00000554258 SAFB2Q14151 953 aaKnown RBP eCLIP25.43■■□□□ 1.66
NEK9-204ENST00000554258 SBF2Q86WG5 1849 aa25.42■■□□□ 1.66
NEK9-204ENST00000554258 ACIN1Q9UKV3 1341 aaKnown RBP25.42■■□□□ 1.66
NEK9-204ENST00000554258 PAK3O75914 559 aaPredicted RBP25.42■■□□□ 1.66
NEK9-204ENST00000554258 SSH2Q76I76 1423 aa25.41■■□□□ 1.66
NEK9-204ENST00000554258 TCP11L2Q8N4U5 519 aa25.41■■□□□ 1.66
NEK9-204ENST00000554258 PHRF1Q9P1Y6 1649 aaKnown RBP25.39■■□□□ 1.66
NEK9-204ENST00000554258 PARP4Q9UKK3 1724 aaKnown RBP25.39■■□□□ 1.65
NEK9-204ENST00000554258 ANKRD30BQ9BXX2 1392 aa25.39■■□□□ 1.65
NEK9-204ENST00000554258 ZC3H6P61129 1189 aaKnown RBP25.38■■□□□ 1.65
NEK9-204ENST00000554258 GPR162Q16538 588 aa25.38■■□□□ 1.65
NEK9-204ENST00000554258 PIK3C2GO75747 1445 aa25.37■■□□□ 1.65
NEK9-204ENST00000554258 RGL3Q3MIN7 710 aa25.37■■□□□ 1.65
NEK9-204ENST00000554258 PRAM1Q96QH2 718 aa25.37■■□□□ 1.65
NEK9-204ENST00000554258 OVOS2A0A0G2JMS6 1433 aa25.37■■□□□ 1.65
NEK9-204ENST00000554258 OVOS2A0A0J9YW53 1432 aa25.37■■□□□ 1.65
NEK9-204ENST00000554258 OVOS2Q6IE36 1432 aa25.37■■□□□ 1.65
NEK9-204ENST00000554258 LARP1Q6PKG0 1096 aaKnown RBP25.36■■□□□ 1.65
NEK9-204ENST00000554258 MTFR1LQ9H019 292 aa25.36■■□□□ 1.65
NEK9-204ENST00000554258 PEAK1Q9H792 1746 aa25.36■■□□□ 1.65
NEK9-204ENST00000554258 STK32BQ9NY57 414 aa25.35■■□□□ 1.65
NEK9-204ENST00000554258 SHANK3Q9BYB0 1731 aa25.34■■□□□ 1.65
NEK9-204ENST00000554258 NGDNQ8NEJ9 315 aaKnown RBP25.33■■□□□ 1.65
NEK9-204ENST00000554258 ARXQ96QS3 562 aa25.33■■□□□ 1.65
NEK9-204ENST00000554258 SGIP1Q9BQI5 828 aa25.32■■□□□ 1.64
NEK9-204ENST00000554258 THRAP3Q9Y2W1 955 aaKnown RBP25.32■■□□□ 1.64
NEK9-204ENST00000554258 PROM2Q8N271 834 aa25.31■■□□□ 1.64
NEK9-204ENST00000554258 POGKQ9P215 609 aa25.31■■□□□ 1.64
NEK9-204ENST00000554258 DHX57Q6P158 1386 aaKnown RBP25.31■■□□□ 1.64
NEK9-204ENST00000554258 MAP3K5Q99683 1374 aa25.31■■□□□ 1.64
NEK9-204ENST00000554258 SLC15A2Q16348 729 aa25.29■■□□□ 1.64
NEK9-204ENST00000554258 EIF3AQ14152 1382 aaKnown RBP25.29■■□□□ 1.64
NEK9-204ENST00000554258 SLC4A1APQ9BWU0 796 aaKnown RBP25.28■■□□□ 1.64
NEK9-204ENST00000554258 PRR36Q9H6K5 1346 aa25.28■■□□□ 1.64
NEK9-204ENST00000554258 PTF1AQ7RTS3 328 aa25.27■■□□□ 1.64
NEK9-204ENST00000554258 SPATA31E1Q6ZUB1 1445 aa25.27■■□□□ 1.64
NEK9-204ENST00000554258 PELP1Q8IZL8 1130 aaKnown RBP25.26■■□□□ 1.63
NEK9-204ENST00000554258 HIRIP3Q9BW71 556 aaPredicted RBP25.26■■□□□ 1.63
NEK9-204ENST00000554258 NUTM2GQ5VZR2 741 aa25.25■■□□□ 1.63
NEK9-204ENST00000554258 C14orf93Q9H972 538 aaKnown RBP25.25■■□□□ 1.63
NEK9-204ENST00000554258 TULP4Q9NRJ4 1543 aa25.25■■□□□ 1.63
NEK9-204ENST00000554258 LMO7Q8WWI1 1683 aa25.24■■□□□ 1.63
NEK9-204ENST00000554258 ATP7BP35670 1465 aa25.24■■□□□ 1.63
NEK9-204ENST00000554258 LRRC37A3O60309 1634 aa25.23■■□□□ 1.63
NEK9-204ENST00000554258 TXNRD1Q16881 649 aa25.23■■□□□ 1.63
NEK9-204ENST00000554258 HSPA6P17066 643 aa25.22■■□□□ 1.63
NEK9-204ENST00000554258 DDB1Q16531 1140 aa25.2■■□□□ 1.62
NEK9-204ENST00000554258 CFAP70Q5T0N1 1121 aa25.2■■□□□ 1.62
NEK9-204ENST00000554258 MINK1Q8N4C8 1332 aaPredicted RBP25.19■■□□□ 1.62
NEK9-204ENST00000554258 KLHL34Q8N239 644 aa25.19■■□□□ 1.62
NEK9-204ENST00000554258 AKAP12Q02952 1782 aa25.18■■□□□ 1.62
NEK9-204ENST00000554258 ITSN1Q15811 1721 aa25.18■■□□□ 1.62
NEK9-204ENST00000554258 CPDO75976 1380 aa25.17■■□□□ 1.62
NEK9-204ENST00000554258 COL5A2P05997 1499 aaPredicted RBP25.16■■□□□ 1.62
NEK9-204ENST00000554258 CRB1P82279 1406 aa25.16■■□□□ 1.62
NEK9-204ENST00000554258 WASLO00401 505 aaPredicted RBP25.14■■□□□ 1.62
NEK9-204ENST00000554258 ATP10DQ9P241 1426 aa25.13■■□□□ 1.61
NEK9-204ENST00000554258 MARCH10Q8NA82 808 aaPredicted RBP25.11■■□□□ 1.61
NEK9-204ENST00000554258 GPBP1L1Q9HC44 474 aaPredicted RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms