RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 SMARCA2P51531 1590 aa4.89□□□□□ -1.63
LRFN5-204ENST00000554171 A6NJR5 290 aa4.89□□□□□ -1.63
LRFN5-204ENST00000554171 CAPN15O75808 1086 aa4.89□□□□□ -1.63
LRFN5-204ENST00000554171 HDGFL1Q5TGJ6 251 aa4.89□□□□□ -1.63
LRFN5-204ENST00000554171 NFATC2IPQ8NCF5 419 aa4.89□□□□□ -1.63
LRFN5-204ENST00000554171 SPRYD3Q8NCJ5 442 aa4.89□□□□□ -1.63
LRFN5-204ENST00000554171 NBPF3Q9H094 633 aa4.89□□□□□ -1.63
LRFN5-204ENST00000554171 ZBED9Q6R2W3 1325 aa4.89□□□□□ -1.63
LRFN5-204ENST00000554171 DNAJC21Q5F1R6 531 aaKnown RBP4.89□□□□□ -1.63
LRFN5-204ENST00000554171 ENOX1Q8TC92 643 aaKnown RBP4.89□□□□□ -1.63
LRFN5-204ENST00000554171 GIMAP1Q8WWP7 306 aa4.89□□□□□ -1.63
LRFN5-204ENST00000554171 ZNF512BQ96KM6 892 aaPredicted RBP4.89□□□□□ -1.63
LRFN5-204ENST00000554171 CCDC85AQ96PX6 553 aaPredicted RBP4.89□□□□□ -1.63
LRFN5-204ENST00000554171 CTAGE5O15320 804 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 CALRP27797 417 aaKnown RBP4.88□□□□□ -1.63
LRFN5-204ENST00000554171 PEX19P40855 299 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 TBC1D10BQ4KMP7 808 aaPredicted RBP4.88□□□□□ -1.63
LRFN5-204ENST00000554171 AMOTL1Q8IY63 956 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 MAP7D2Q96T17 732 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 PUF60Q9UHX1 559 aaKnown RBP4.88□□□□□ -1.63
LRFN5-204ENST00000554171 NACADO15069 1562 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 ANKRD18BA2A2Z9 1011 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 DCAF8L1A6NGE4 600 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 SMAPO00193 183 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 PPP1R12AO14974 1030 aaPredicted RBP4.88□□□□□ -1.63
LRFN5-204ENST00000554171 PROM2Q8N271 834 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 SLC24A3Q9HC58 644 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 FOXD4L1Q9NU39 408 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.88□□□□□ -1.63
LRFN5-204ENST00000554171 ABCF2Q9UG63 623 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 PAXBP1Q9Y5B6 917 aa4.88□□□□□ -1.63
LRFN5-204ENST00000554171 NAT2P11245 290 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 LMOD2Q6P5Q4 547 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 AEBP1Q8IUX7 1158 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 FAN1Q9Y2M0 1017 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 COPB2P35606 906 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 CCDC181Q5TID7 509 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 LARP1BQ659C4 914 aaKnown RBP4.87□□□□□ -1.63
LRFN5-204ENST00000554171 ESPNB1AK53 854 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 TCF3P15923 654 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 LMOD3Q0VAK6 560 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 NEUROD2Q15784 382 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 TBC1D25Q3MII6 688 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 RC3H1Q5TC82 1133 aaKnown RBP4.87□□□□□ -1.63
LRFN5-204ENST00000554171 KRT77Q7Z794 578 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 GINM1Q9NU53 330 aa4.87□□□□□ -1.63
LRFN5-204ENST00000554171 FGAP02671 866 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 SF3A1Q15459 793 aaKnown RBP4.86□□□□□ -1.63
LRFN5-204ENST00000554171 ELOA2Q8IYF1 753 aaPredicted RBP4.86□□□□□ -1.63
LRFN5-204ENST00000554171 MORC4Q8TE76 937 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 FRS2Q8WU20 508 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 KANK1Q14678 1352 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 KIF1CO43896 1103 aaKnown RBP4.86□□□□□ -1.63
LRFN5-204ENST00000554171 KIF4AO95239 1232 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 CTAG1AP78358 180 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 NEK9Q8TD19 979 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 EPAS1Q99814 870 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 DUSP9Q99956 384 aaKnown RBP4.86□□□□□ -1.63
LRFN5-204ENST00000554171 ANAPC4Q9UJX5 808 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 ATF5Q9Y2D1 282 aaPredicted RBP4.86□□□□□ -1.63
LRFN5-204ENST00000554171 FRMD4BQ9Y2L6 1034 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 GORABQ5T7V8 394 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 MTHFD1LQ6UB35 978 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 RSPH1Q8WYR4 309 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 TBC1D2BQ9UPU7 963 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 PEX14O75381 377 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 MAGEA8P43361 318 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 CCDC15Q0P6D6 951 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 RPAINQ86UA6 219 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 TTC30BQ8N4P2 665 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 CCDC102AQ96A19 550 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 LZTS2Q9BRK4 669 aa4.86□□□□□ -1.63
LRFN5-204ENST00000554171 LRRC10BA6NIK2 292 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 EGFLAMQ63HQ2 1017 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 SCYL1Q96KG9 808 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 INO80BQ9C086 356 aaPredicted RBP4.85□□□□□ -1.63
LRFN5-204ENST00000554171 ATG3Q9NT62 314 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 ZBTB12Q9Y330 459 aaPredicted RBP4.85□□□□□ -1.63
LRFN5-204ENST00000554171 ZRANB2O95218 330 aaKnown RBP eCLIP4.85□□□□□ -1.63
LRFN5-204ENST00000554171 VDRP11473 427 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 BTF3P20290 206 aaKnown RBP4.85□□□□□ -1.63
LRFN5-204ENST00000554171 DUSP27Q5VZP5 1158 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 STAG2Q8N3U4 1231 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 C22orf23Q9BZE7 217 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 SMC4Q9NTJ3 1288 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 FLT3P36888 993 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 TTC30AQ86WT1 665 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 RPUSD2Q8IZ73 545 aaKnown RBP4.85□□□□□ -1.63
LRFN5-204ENST00000554171 TNPO1Q92973 898 aaKnown RBP4.85□□□□□ -1.63
LRFN5-204ENST00000554171 TRPV5Q9NQA5 729 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 SBNO2Q9Y2G9 1366 aa4.85□□□□□ -1.63
LRFN5-204ENST00000554171 KIF3CO14782 793 aa4.84□□□□□ -1.63
LRFN5-204ENST00000554171 ICE2Q659A1 982 aa4.84□□□□□ -1.63
LRFN5-204ENST00000554171 CHMP7Q8WUX9 453 aaPredicted RBP4.84□□□□□ -1.63
LRFN5-204ENST00000554171 TSPYL2Q9H2G4 693 aaPredicted RBP4.84□□□□□ -1.63
LRFN5-204ENST00000554171 COMMD10Q9Y6G5 202 aa4.84□□□□□ -1.63
LRFN5-204ENST00000554171 ZMYND10O75800 440 aa4.84□□□□□ -1.63
LRFN5-204ENST00000554171 VIL1P09327 827 aaKnown RBP4.84□□□□□ -1.63
LRFN5-204ENST00000554171 MYCBPQ99417 103 aaPredicted RBP4.84□□□□□ -1.63
LRFN5-204ENST00000554171 TPX2Q9ULW0 747 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms