RNA–Protein interactions for RNA: ENST00000553735.1

SOCS4-203, Transcript of suppressor of cytokine signaling 4, humanhuman

TSL 5

Gene SOCS4, Length 297 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-203ENST00000553735 UPF1Q92900 1129 aaKnown RBP eCLIP25.47■■□□□ 1.67
SOCS4-203ENST00000553735 PLCH1Q4KWH8 1693 aa25.46■■□□□ 1.67
SOCS4-203ENST00000553735 PAK3O75914 559 aaPredicted RBP25.45■■□□□ 1.66
SOCS4-203ENST00000553735 SRPK2P78362 688 aaKnown RBP25.45■■□□□ 1.66
SOCS4-203ENST00000553735 CABP2Q9NPB3 220 aa25.45■■□□□ 1.66
SOCS4-203ENST00000553735 NWD2Q9ULI1 1742 aa25.45■■□□□ 1.66
SOCS4-203ENST00000553735 GJD4Q96KN9 370 aaPredicted RBP25.44■■□□□ 1.66
SOCS4-203ENST00000553735 PPIP5K1Q6PFW1 1433 aa25.44■■□□□ 1.66
SOCS4-203ENST00000553735 TONSLQ96HA7 1378 aa25.44■■□□□ 1.66
SOCS4-203ENST00000553735 GLI3P10071 1580 aa25.43■■□□□ 1.66
SOCS4-203ENST00000553735 RALGAPBQ86X10 1494 aa25.42■■□□□ 1.66
SOCS4-203ENST00000553735 FAM83GA6ND36 823 aa25.42■■□□□ 1.66
SOCS4-203ENST00000553735 NRAPQ86VF7 1730 aa25.38■■□□□ 1.65
SOCS4-203ENST00000553735 EVC2Q86UK5 1308 aa25.37■■□□□ 1.65
SOCS4-203ENST00000553735 COL14A1Q05707 1796 aaKnown RBP25.37■■□□□ 1.65
SOCS4-203ENST00000553735 VPS72Q15906 364 aa25.37■■□□□ 1.65
SOCS4-203ENST00000553735 PHRF1Q9P1Y6 1649 aaKnown RBP25.37■■□□□ 1.65
SOCS4-203ENST00000553735 CABP1Q9NZU7 370 aa25.35■■□□□ 1.65
SOCS4-203ENST00000553735 ATAD2Q6PL18 1390 aa25.34■■□□□ 1.65
SOCS4-203ENST00000553735 NUTM2GQ5VZR2 741 aa25.34■■□□□ 1.65
SOCS4-203ENST00000553735 CARD11Q9BXL7 1154 aa25.34■■□□□ 1.65
SOCS4-203ENST00000553735 SBNO2Q9Y2G9 1366 aa25.33■■□□□ 1.65
SOCS4-203ENST00000553735 USP6P35125 1406 aa25.32■■□□□ 1.64
SOCS4-203ENST00000553735 BTG4Q9NY30 223 aa25.32■■□□□ 1.64
SOCS4-203ENST00000553735 BRD4O60885 1362 aaPredicted RBP25.31■■□□□ 1.64
SOCS4-203ENST00000553735 KIAA0232Q92628 1395 aa25.31■■□□□ 1.64
SOCS4-203ENST00000553735 USP19O94966 1318 aa25.31■■□□□ 1.64
SOCS4-203ENST00000553735 NRKQ7Z2Y5 1582 aa25.31■■□□□ 1.64
SOCS4-203ENST00000553735 ABTB2Q8N961 1025 aa25.3■■□□□ 1.64
SOCS4-203ENST00000553735 PRDM11Q9NQV5 511 aa25.3■■□□□ 1.64
SOCS4-203ENST00000553735 SSH2Q76I76 1423 aa25.29■■□□□ 1.64
SOCS4-203ENST00000553735 CCDC9Q9Y3X0 531 aaKnown RBP25.28■■□□□ 1.64
SOCS4-203ENST00000553735 ONECUT3O60422 494 aaPredicted RBP25.27■■□□□ 1.64
SOCS4-203ENST00000553735 BRWD3Q6RI45 1802 aa25.26■■□□□ 1.63
SOCS4-203ENST00000553735 EP400Q96L91 3159 aa25.26■■□□□ 1.63
SOCS4-203ENST00000553735 ZC3H6P61129 1189 aaKnown RBP25.25■■□□□ 1.63
SOCS4-203ENST00000553735 CHRNA2Q15822 529 aa25.25■■□□□ 1.63
SOCS4-203ENST00000553735 SEPT12Q8IYM1 358 aa25.25■■□□□ 1.63
SOCS4-203ENST00000553735 AKAP12Q02952 1782 aa25.24■■□□□ 1.63
SOCS4-203ENST00000553735 CPDO75976 1380 aa25.23■■□□□ 1.63
SOCS4-203ENST00000553735 NLRP13Q86W25 1043 aa25.23■■□□□ 1.63
SOCS4-203ENST00000553735 PIK3C2AO00443 1686 aa25.23■■□□□ 1.63
SOCS4-203ENST00000553735 CPSF1Q10570 1443 aaKnown RBP25.22■■□□□ 1.63
SOCS4-203ENST00000553735 SPATA31A5Q5VU36 1347 aa25.22■■□□□ 1.63
SOCS4-203ENST00000553735 SPATA31A7Q8IWB4 1347 aa25.22■■□□□ 1.63
SOCS4-203ENST00000553735 LMO7Q8WWI1 1683 aa25.2■■□□□ 1.63
SOCS4-203ENST00000553735 GCP02774 474 aa25.2■■□□□ 1.62
SOCS4-203ENST00000553735 SLIT3O75094 1523 aa25.2■■□□□ 1.62
SOCS4-203ENST00000553735 FAM98CQ17RN3 349 aaKnown RBP25.19■■□□□ 1.62
SOCS4-203ENST00000553735 ZNF692Q9BU19 519 aaPredicted RBP25.19■■□□□ 1.62
SOCS4-203ENST00000553735 TTC21BQ7Z4L5 1316 aa25.18■■□□□ 1.62
SOCS4-203ENST00000553735 CAMTA1Q9Y6Y1 1673 aa25.18■■□□□ 1.62
SOCS4-203ENST00000553735 NLRP6P59044 892 aa25.18■■□□□ 1.62
SOCS4-203ENST00000553735 CD163L1Q9NR16 1453 aa25.16■■□□□ 1.62
SOCS4-203ENST00000553735 MON2Q7Z3U7 1717 aa25.16■■□□□ 1.62
SOCS4-203ENST00000553735 TESK2Q96S53 571 aa25.16■■□□□ 1.62
SOCS4-203ENST00000553735 THSD7AQ9UPZ6 1657 aa25.16■■□□□ 1.62
SOCS4-203ENST00000553735 SPATA31A1Q5TZJ5 1347 aa25.15■■□□□ 1.62
SOCS4-203ENST00000553735 STRN4Q9NRL3 753 aa25.15■■□□□ 1.62
SOCS4-203ENST00000553735 KTN1Q86UP2 1357 aaKnown RBP25.15■■□□□ 1.62
SOCS4-203ENST00000553735 KRT27Q7Z3Y8 459 aa25.14■■□□□ 1.62
SOCS4-203ENST00000553735 TTC21AQ8NDW8 1320 aa25.13■■□□□ 1.61
SOCS4-203ENST00000553735 CLSPNQ9HAW4 1339 aa25.13■■□□□ 1.61
SOCS4-203ENST00000553735 ST20-MTHFSA0A0A6YYL1 179 aa25.13■■□□□ 1.61
SOCS4-203ENST00000553735 CCDC125Q86Z20 511 aa25.13■■□□□ 1.61
SOCS4-203ENST00000553735 PCGF6Q9BYE7 350 aa25.13■■□□□ 1.61
SOCS4-203ENST00000553735 A0A0G2JS52 829 aa25.12■■□□□ 1.61
SOCS4-203ENST00000553735 MYT1Q01538 1121 aa25.12■■□□□ 1.61
SOCS4-203ENST00000553735 PUS7Q96PZ0 661 aaKnown RBP25.12■■□□□ 1.61
SOCS4-203ENST00000553735 BLMP54132 1417 aaPredicted RBP25.11■■□□□ 1.61
SOCS4-203ENST00000553735 COL5A2P05997 1499 aaPredicted RBP25.1■■□□□ 1.61
SOCS4-203ENST00000553735 SLC12A5Q9H2X9 1139 aa25.1■■□□□ 1.61
SOCS4-203ENST00000553735 AATKQ6ZMQ8 1374 aa25.09■■□□□ 1.61
SOCS4-203ENST00000553735 LARP1Q6PKG0 1096 aaKnown RBP25.09■■□□□ 1.61
SOCS4-203ENST00000553735 EVA1CP58658 441 aa25.08■■□□□ 1.61
SOCS4-203ENST00000553735 TMC1Q8TDI8 760 aa25.08■■□□□ 1.61
SOCS4-203ENST00000553735 TIMELESSQ9UNS1 1208 aa25.08■■□□□ 1.61
SOCS4-203ENST00000553735 COL18A1P39060 1754 aa25.08■■□□□ 1.6
SOCS4-203ENST00000553735 USP47Q96K76 1375 aa25.07■■□□□ 1.6
SOCS4-203ENST00000553735 NFAT5O94916 1531 aa25.07■■□□□ 1.6
SOCS4-203ENST00000553735 USP54Q70EL1 1684 aa25.06■■□□□ 1.6
SOCS4-203ENST00000553735 A0A1W2PP64 1363 aa25.05■■□□□ 1.6
SOCS4-203ENST00000553735 USP31Q70CQ4 1352 aa25.05■■□□□ 1.6
SOCS4-203ENST00000553735 BARGINQ6ZT62 677 aa25.05■■□□□ 1.6
SOCS4-203ENST00000553735 USP35Q9P2H5 1018 aa25.05■■□□□ 1.6
SOCS4-203ENST00000553735 ZBTB7CA1YPR0 619 aa25.04■■□□□ 1.6
SOCS4-203ENST00000553735 HDGFL2Q7Z4V5 671 aaPredicted RBP25.04■■□□□ 1.6
SOCS4-203ENST00000553735 ARHGEF25Q86VW2 580 aa25.04■■□□□ 1.6
SOCS4-203ENST00000553735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.04■■□□□ 1.6
SOCS4-203ENST00000553735 KCNH5Q8NCM2 988 aa25.04■■□□□ 1.6
SOCS4-203ENST00000553735 ZRANB1Q9UGI0 708 aa25.04■■□□□ 1.6
SOCS4-203ENST00000553735 EDC4Q6P2E9 1401 aaKnown RBP25.03■■□□□ 1.6
SOCS4-203ENST00000553735 NINLQ9Y2I6 1382 aa25.03■■□□□ 1.6
SOCS4-203ENST00000553735 NME9Q86XW9 330 aa25.02■■□□□ 1.6
SOCS4-203ENST00000553735 TCP11L2Q8N4U5 519 aa25.02■■□□□ 1.6
SOCS4-203ENST00000553735 TERF2IPQ9NYB0 399 aa25.02■■□□□ 1.6
SOCS4-203ENST00000553735 SLC24A1O60721 1099 aa25.01■■□□□ 1.59
SOCS4-203ENST00000553735 FAM182BQ5T319 152 aa25.01■■□□□ 1.59
SOCS4-203ENST00000553735 AXIN2Q9Y2T1 843 aa25.01■■□□□ 1.59
SOCS4-203ENST00000553735 CRB1P82279 1406 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms