RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PRR7Q8TB68 274 aa9.68□□□□□ -0.86
SCFD1-210ENST00000553693 RSPH6AQ9H0K4 717 aa9.68□□□□□ -0.86
SCFD1-210ENST00000553693 ZBTB3Q9H5J0 574 aa9.68□□□□□ -0.86
SCFD1-210ENST00000553693 TRIM32Q13049 653 aa9.67□□□□□ -0.86
SCFD1-210ENST00000553693 DESI1Q6ICB0 168 aa9.67□□□□□ -0.86
SCFD1-210ENST00000553693 NUDT12Q9BQG2 462 aa9.67□□□□□ -0.86
SCFD1-210ENST00000553693 KCNMA1Q12791 1236 aa9.66□□□□□ -0.86
SCFD1-210ENST00000553693 PTPRNQ16849 979 aa9.66□□□□□ -0.86
SCFD1-210ENST00000553693 KDM4CQ9H3R0 1056 aa9.66□□□□□ -0.86
SCFD1-210ENST00000553693 CCNYL3P0C7X3 344 aa9.65□□□□□ -0.86
SCFD1-210ENST00000553693 TUSC1Q2TAM9 212 aa9.65□□□□□ -0.86
SCFD1-210ENST00000553693 DDRGK1Q96HY6 314 aa9.65□□□□□ -0.86
SCFD1-210ENST00000553693 GPBP1L1Q9HC44 474 aaPredicted RBP9.64□□□□□ -0.87
SCFD1-210ENST00000553693 PCDHB15Q9Y5E8 787 aa9.64□□□□□ -0.87
SCFD1-210ENST00000553693 HRCP23327 699 aa9.63□□□□□ -0.87
SCFD1-210ENST00000553693 CLK2P49760 499 aaKnown RBP9.63□□□□□ -0.87
SCFD1-210ENST00000553693 CSPP1Q1MSJ5 1256 aa9.63□□□□□ -0.87
SCFD1-210ENST00000553693 LIMD1Q9UGP4 676 aa9.63□□□□□ -0.87
SCFD1-210ENST00000553693 WNT7BP56706 349 aa9.62□□□□□ -0.87
SCFD1-210ENST00000553693 TRIM46Q7Z4K8 759 aa9.62□□□□□ -0.87
SCFD1-210ENST00000553693 NUTM2BA6NNL0 878 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-210ENST00000553693 NUTM2EB1AL46 878 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-210ENST00000553693 NUTM2DQ5VT03 806 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-210ENST00000553693 NUTM2AQ8IVF1 878 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-210ENST00000553693 CABLES1Q8TDN4 633 aa9.6□□□□□ -0.87
SCFD1-210ENST00000553693 CFAP99D6REC4 459 aa9.59□□□□□ -0.87
SCFD1-210ENST00000553693 BMP1P13497 986 aa9.59□□□□□ -0.87
SCFD1-210ENST00000553693 LILRB3O75022 631 aa9.58□□□□□ -0.88
SCFD1-210ENST00000553693 QPCTQ16769 361 aa9.58□□□□□ -0.88
SCFD1-210ENST00000553693 SH3D19Q5HYK7 790 aa9.58□□□□□ -0.88
SCFD1-210ENST00000553693 LYPD8Q6UX82 237 aa9.58□□□□□ -0.88
SCFD1-210ENST00000553693 FAM117AQ9C073 453 aa9.58□□□□□ -0.88
SCFD1-210ENST00000553693 EVA1BQ9NVM1 165 aa9.58□□□□□ -0.88
SCFD1-210ENST00000553693 KCNH2Q12809 1159 aa9.57□□□□□ -0.88
SCFD1-210ENST00000553693 HELBQ8NG08 1087 aaPredicted RBP9.57□□□□□ -0.88
SCFD1-210ENST00000553693 POLR3EQ9NVU0 708 aa9.57□□□□□ -0.88
SCFD1-210ENST00000553693 SKIV2LQ15477 1246 aaKnown RBP9.56□□□□□ -0.88
SCFD1-210ENST00000553693 PTCRAQ6ISU1 281 aaPredicted RBP9.56□□□□□ -0.88
SCFD1-210ENST00000553693 TSC1Q92574 1164 aa9.56□□□□□ -0.88
SCFD1-210ENST00000553693 UNC93B1Q9H1C4 597 aa9.56□□□□□ -0.88
SCFD1-210ENST00000553693 NEUROD2Q15784 382 aa9.55□□□□□ -0.88
SCFD1-210ENST00000553693 TPRNQ4KMQ1 711 aa9.55□□□□□ -0.88
SCFD1-210ENST00000553693 PLEKHG3A1L390 1219 aa9.54□□□□□ -0.88
SCFD1-210ENST00000553693 CTHP32929 405 aa9.54□□□□□ -0.88
SCFD1-210ENST00000553693 SKOR1P84550 965 aa9.54□□□□□ -0.88
SCFD1-210ENST00000553693 RC3H1Q5TC82 1133 aaKnown RBP9.54□□□□□ -0.88
SCFD1-210ENST00000553693 ATP1B4Q9UN42 357 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-210ENST00000553693 VSIG8P0DPA2 414 aa9.52□□□□□ -0.89
SCFD1-210ENST00000553693 TMEM151AQ8N4L1 468 aa9.52□□□□□ -0.89
SCFD1-210ENST00000553693 F12P00748 615 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-210ENST00000553693 RTL5Q5HYW3 569 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-210ENST00000553693 EHBP1Q8NDI1 1231 aa9.51□□□□□ -0.89
SCFD1-210ENST00000553693 GDF11O95390 407 aa9.5□□□□□ -0.89
SCFD1-210ENST00000553693 ALDH1A1P00352 501 aa9.5□□□□□ -0.89
SCFD1-210ENST00000553693 SH3BP2P78314 561 aa9.5□□□□□ -0.89
SCFD1-210ENST00000553693 RASSF7Q02833 373 aa9.5□□□□□ -0.89
SCFD1-210ENST00000553693 LINC01559Q495D7 138 aa9.5□□□□□ -0.89
SCFD1-210ENST00000553693 ZNF511Q8NB15 262 aa9.5□□□□□ -0.89
SCFD1-210ENST00000553693 MAP10Q9P2G4 905 aa9.5□□□□□ -0.89
SCFD1-210ENST00000553693 CAPN5O15484 640 aaPredicted RBP9.49□□□□□ -0.89
SCFD1-210ENST00000553693 PER1O15534 1290 aaPredicted RBP9.49□□□□□ -0.89
SCFD1-210ENST00000553693 BAP1Q92560 729 aa9.49□□□□□ -0.89
SCFD1-210ENST00000553693 XP32Q5T750 250 aa9.48□□□□□ -0.89
SCFD1-210ENST00000553693 ARMC2Q8NEN0 867 aa9.48□□□□□ -0.89
SCFD1-210ENST00000553693 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.48□□□□□ -0.89
SCFD1-210ENST00000553693 GOPCQ9HD26 462 aa9.48□□□□□ -0.89
SCFD1-210ENST00000553693 BRPF1P55201 1214 aaPredicted RBP9.47□□□□□ -0.89
SCFD1-210ENST00000553693 PPP2R2DQ66LE6 453 aa9.47□□□□□ -0.89
SCFD1-210ENST00000553693 ZFP42Q96MM3 310 aa9.47□□□□□ -0.89
SCFD1-210ENST00000553693 SIAH2O43255 324 aa9.46□□□□□ -0.9
SCFD1-210ENST00000553693 VARSP26640 1264 aaKnown RBP9.46□□□□□ -0.9
SCFD1-210ENST00000553693 PROCA1Q8NCQ7 364 aaPredicted RBP9.46□□□□□ -0.9
SCFD1-210ENST00000553693 NBPF14Q5TI25 921 aa9.45□□□□□ -0.9
SCFD1-210ENST00000553693 PCMTD1Q96MG8 357 aaPredicted RBP9.45□□□□□ -0.9
SCFD1-210ENST00000553693 CTDSPL2Q05D32 466 aa9.42□□□□□ -0.9
SCFD1-210ENST00000553693 IL27Q8NEV9 243 aa9.42□□□□□ -0.9
SCFD1-210ENST00000553693 FAM174AQ8TBP5 190 aa9.42□□□□□ -0.9
SCFD1-210ENST00000553693 KRTAP4-8Q9BYQ9 185 aa9.42□□□□□ -0.9
SCFD1-210ENST00000553693 WASF2Q9Y6W5 498 aa9.42□□□□□ -0.9
SCFD1-210ENST00000553693 AP1G2O75843 785 aa9.41□□□□□ -0.9
SCFD1-210ENST00000553693 AGERQ15109 404 aa9.41□□□□□ -0.9
SCFD1-210ENST00000553693 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
SCFD1-210ENST00000553693 GPKOWQ92917 476 aaPredicted RBP eCLIP9.41□□□□□ -0.9
SCFD1-210ENST00000553693 MPNDQ8N594 471 aa9.4□□□□□ -0.9
SCFD1-210ENST00000553693 SOBPA7XYQ1 873 aa9.39□□□□□ -0.91
SCFD1-210ENST00000553693 FOXJ1Q92949 421 aa9.39□□□□□ -0.91
SCFD1-210ENST00000553693 TLL2Q9Y6L7 1015 aa9.39□□□□□ -0.91
SCFD1-210ENST00000553693 RFC5P40937 340 aa9.38□□□□□ -0.91
SCFD1-210ENST00000553693 FBXO31Q5XUX0 539 aaPredicted RBP9.38□□□□□ -0.91
SCFD1-210ENST00000553693 PNMA1Q8ND90 353 aa9.38□□□□□ -0.91
SCFD1-210ENST00000553693 LRRN4Q8WUT4 740 aa9.38□□□□□ -0.91
SCFD1-210ENST00000553693 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
SCFD1-210ENST00000553693 USP17L8P0C7I0 530 aa9.37□□□□□ -0.91
SCFD1-210ENST00000553693 ADAMTS8Q9UP79 889 aa9.37□□□□□ -0.91
SCFD1-210ENST00000553693 FKBPLQ9UIM3 349 aa9.36□□□□□ -0.91
SCFD1-210ENST00000553693 ADH1CP00326 375 aa9.35□□□□□ -0.91
SCFD1-210ENST00000553693 TMEM259Q4ZIN3 620 aa9.35□□□□□ -0.91
SCFD1-210ENST00000553693 GPAT2Q6NUI2 795 aa9.35□□□□□ -0.91
SCFD1-210ENST00000553693 SH3BP5LQ7L8J4 393 aa9.35□□□□□ -0.91
SCFD1-210ENST00000553693 C1QTNF2Q9BXJ5 285 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms