RNA–Protein interactions for RNA: ENST00000553658.1

AC087386.1-201, humanhuman

TSL 4 BASIC

Gene AC087386.1, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087386.1-201ENST00000553658 MSH6P52701 1360 aa22.81■■□□□ 1.24
AC087386.1-201ENST00000553658 NME9Q86XW9 330 aa22.81■■□□□ 1.24
AC087386.1-201ENST00000553658 NGDNQ8NEJ9 315 aaKnown RBP22.81■■□□□ 1.24
AC087386.1-201ENST00000553658 PHF8Q9UPP1 1060 aa22.81■■□□□ 1.24
AC087386.1-201ENST00000553658 MARF1Q9Y4F3 1742 aaKnown RBP22.8■■□□□ 1.24
AC087386.1-201ENST00000553658 LTBP4Q8N2S1 1624 aa22.8■■□□□ 1.24
AC087386.1-201ENST00000553658 ZRANB1Q9UGI0 708 aa22.8■■□□□ 1.24
AC087386.1-201ENST00000553658 TTC21BQ7Z4L5 1316 aa22.8■■□□□ 1.24
AC087386.1-201ENST00000553658 TNNT2P45379 298 aaPredicted RBP22.79■■□□□ 1.24
AC087386.1-201ENST00000553658 ESCO1Q5FWF5 840 aa22.79■■□□□ 1.24
AC087386.1-201ENST00000553658 ORAI2Q96SN7 254 aa22.79■■□□□ 1.24
AC087386.1-201ENST00000553658 ATF3P18847 181 aa22.78■■□□□ 1.24
AC087386.1-201ENST00000553658 MAP2P11137 1827 aaKnown RBP22.78■■□□□ 1.24
AC087386.1-201ENST00000553658 TRPM3Q9HCF6 1732 aaPredicted RBP22.77■■□□□ 1.23
AC087386.1-201ENST00000553658 USP54Q70EL1 1684 aa22.76■■□□□ 1.23
AC087386.1-201ENST00000553658 FAM9BQ8IZU0 186 aa22.74■■□□□ 1.23
AC087386.1-201ENST00000553658 SHPRHQ149N8 1683 aa22.74■■□□□ 1.23
AC087386.1-201ENST00000553658 OVOS2A0A0J9YW53 1432 aa22.74■■□□□ 1.23
AC087386.1-201ENST00000553658 OVOS2Q6IE36 1432 aa22.74■■□□□ 1.23
AC087386.1-201ENST00000553658 CADPS2Q86UW7 1296 aa22.73■■□□□ 1.23
AC087386.1-201ENST00000553658 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
AC087386.1-201ENST00000553658 PNISRQ8TF01 805 aaKnown RBP22.72■■□□□ 1.23
AC087386.1-201ENST00000553658 TTC21AQ8NDW8 1320 aa22.71■■□□□ 1.23
AC087386.1-201ENST00000553658 FOXO3O43524 673 aa22.68■■□□□ 1.22
AC087386.1-201ENST00000553658 FBLN1P23142 703 aa22.68■■□□□ 1.22
AC087386.1-201ENST00000553658 XPCQ01831 940 aaPredicted RBP22.68■■□□□ 1.22
AC087386.1-201ENST00000553658 COG3Q96JB2 828 aa22.68■■□□□ 1.22
AC087386.1-201ENST00000553658 MTHFSP49914 203 aa22.67■■□□□ 1.22
AC087386.1-201ENST00000553658 ALS2Q96Q42 1657 aa22.67■■□□□ 1.22
AC087386.1-201ENST00000553658 USP31Q70CQ4 1352 aa22.66■■□□□ 1.22
AC087386.1-201ENST00000553658 COL3A1P02461 1466 aaPredicted RBP22.66■■□□□ 1.22
AC087386.1-201ENST00000553658 SCAF1Q9H7N4 1312 aaKnown RBP22.65■■□□□ 1.22
AC087386.1-201ENST00000553658 PAK3O75914 559 aaPredicted RBP22.65■■□□□ 1.22
AC087386.1-201ENST00000553658 PSME1Q06323 249 aa22.65■■□□□ 1.22
AC087386.1-201ENST00000553658 DDX17Q92841 729 aaKnown RBP22.64■■□□□ 1.21
AC087386.1-201ENST00000553658 PEAK1Q9H792 1746 aa22.64■■□□□ 1.21
AC087386.1-201ENST00000553658 NUTM2GQ5VZR2 741 aa22.63■■□□□ 1.21
AC087386.1-201ENST00000553658 NHSL1Q5SYE7 1610 aa22.62■■□□□ 1.21
AC087386.1-201ENST00000553658 SMG6Q86US8 1419 aaKnown RBP22.62■■□□□ 1.21
AC087386.1-201ENST00000553658 AATKQ6ZMQ8 1374 aa22.62■■□□□ 1.21
AC087386.1-201ENST00000553658 PXDNQ92626 1479 aa22.61■■□□□ 1.21
AC087386.1-201ENST00000553658 BRINP3Q76B58 766 aa22.61■■□□□ 1.21
AC087386.1-201ENST00000553658 KRT28Q7Z3Y7 464 aa22.61■■□□□ 1.21
AC087386.1-201ENST00000553658 SLAIN2Q9P270 581 aa22.6■■□□□ 1.21
AC087386.1-201ENST00000553658 POLKQ9UBT6 870 aa22.6■■□□□ 1.21
AC087386.1-201ENST00000553658 LTN1O94822 1766 aa22.6■■□□□ 1.21
AC087386.1-201ENST00000553658 NLRP6P59044 892 aa22.59■■□□□ 1.21
AC087386.1-201ENST00000553658 ABTB2Q8N961 1025 aa22.59■■□□□ 1.21
AC087386.1-201ENST00000553658 EMILIN1Q9Y6C2 1016 aa22.59■■□□□ 1.21
AC087386.1-201ENST00000553658 CDK12Q9NYV4 1490 aaPredicted RBP22.59■■□□□ 1.21
AC087386.1-201ENST00000553658 HNRNPUQ00839 825 aaKnown RBP eCLIP22.58■■□□□ 1.21
AC087386.1-201ENST00000553658 RRS1Q15050 365 aaKnown RBP22.58■■□□□ 1.21
AC087386.1-201ENST00000553658 BLMP54132 1417 aaPredicted RBP22.57■■□□□ 1.2
AC087386.1-201ENST00000553658 SOX12O15370 315 aa22.57■■□□□ 1.2
AC087386.1-201ENST00000553658 CFAP53Q96M91 514 aa22.57■■□□□ 1.2
AC087386.1-201ENST00000553658 ROBO1Q9Y6N7 1651 aa22.57■■□□□ 1.2
AC087386.1-201ENST00000553658 CRYBG1Q9Y4K1 1723 aa22.57■■□□□ 1.2
AC087386.1-201ENST00000553658 WDR43Q15061 677 aaKnown RBP eCLIP22.56■■□□□ 1.2
AC087386.1-201ENST00000553658 PHRF1Q9P1Y6 1649 aaKnown RBP22.56■■□□□ 1.2
AC087386.1-201ENST00000553658 NFAT5O94916 1531 aa22.56■■□□□ 1.2
AC087386.1-201ENST00000553658 NPHP3Q7Z494 1330 aa22.56■■□□□ 1.2
AC087386.1-201ENST00000553658 SENP3-EIF4A1A0A087X0R7 540 aa22.55■■□□□ 1.2
AC087386.1-201ENST00000553658 ADAMTS8Q9UP79 889 aa22.55■■□□□ 1.2
AC087386.1-201ENST00000553658 SLIT3O75094 1523 aa22.55■■□□□ 1.2
AC087386.1-201ENST00000553658 PNPLA6Q8IY17 1366 aa22.54■■□□□ 1.2
AC087386.1-201ENST00000553658 PPM1GO15355 546 aaPredicted RBP22.54■■□□□ 1.2
AC087386.1-201ENST00000553658 MED1Q15648 1581 aaPredicted RBP22.54■■□□□ 1.2
AC087386.1-201ENST00000553658 SBNO1A3KN83 1393 aa22.53■■□□□ 1.2
AC087386.1-201ENST00000553658 INSRP06213 1382 aa22.52■■□□□ 1.2
AC087386.1-201ENST00000553658 TNS3Q68CZ2 1445 aa22.52■■□□□ 1.2
AC087386.1-201ENST00000553658 LMOD2Q6P5Q4 547 aa22.51■■□□□ 1.19
AC087386.1-201ENST00000553658 MAP3K19Q56UN5 1328 aa22.51■■□□□ 1.19
AC087386.1-201ENST00000553658 PLEKHG5O94827 1062 aa22.5■■□□□ 1.19
AC087386.1-201ENST00000553658 ABCA3Q99758 1704 aa22.49■■□□□ 1.19
AC087386.1-201ENST00000553658 USP19O94966 1318 aa22.49■■□□□ 1.19
AC087386.1-201ENST00000553658 CENPBP07199 599 aaPredicted RBP22.47■■□□□ 1.19
AC087386.1-201ENST00000553658 SOS2Q07890 1332 aaPredicted RBP22.47■■□□□ 1.19
AC087386.1-201ENST00000553658 SPATA31A3Q5VYP0 1347 aa22.47■■□□□ 1.19
AC087386.1-201ENST00000553658 AHDC1Q5TGY3 1603 aaPredicted RBP22.46■■□□□ 1.19
AC087386.1-201ENST00000553658 RGPD1P0DJD0 1748 aa22.46■■□□□ 1.19
AC087386.1-201ENST00000553658 DIAPH1O60610 1272 aaKnown RBP22.46■■□□□ 1.19
AC087386.1-201ENST00000553658 CCDC146Q8IYE0 955 aa22.46■■□□□ 1.19
AC087386.1-201ENST00000553658 RGPD5Q99666 1765 aa22.45■■□□□ 1.18
AC087386.1-201ENST00000553658 U2SURPO15042 1029 aaKnown RBP22.44■■□□□ 1.18
AC087386.1-201ENST00000553658 FLT4P35916 1363 aa22.43■■□□□ 1.18
AC087386.1-201ENST00000553658 ZBED9Q6R2W3 1325 aa22.43■■□□□ 1.18
AC087386.1-201ENST00000553658 U2AF1L5P0DN76 240 aaPredicted RBP22.43■■□□□ 1.18
AC087386.1-201ENST00000553658 U2AF1Q01081 240 aaKnown RBP eCLIP22.43■■□□□ 1.18
AC087386.1-201ENST00000553658 IL13P35225 146 aa22.42■■□□□ 1.18
AC087386.1-201ENST00000553658 HSP90AB2PQ58FF8 381 aa22.42■■□□□ 1.18
AC087386.1-201ENST00000553658 NUDCQ9Y266 331 aa22.42■■□□□ 1.18
AC087386.1-201ENST00000553658 PHLPP1O60346 1717 aa22.42■■□□□ 1.18
AC087386.1-201ENST00000553658 ARHGEF10O15013 1369 aa22.41■■□□□ 1.18
AC087386.1-201ENST00000553658 RGPD2P0DJD1 1756 aa22.41■■□□□ 1.18
AC087386.1-201ENST00000553658 IQSEC2Q5JU85 1478 aa22.41■■□□□ 1.18
AC087386.1-201ENST00000553658 GCP02774 474 aa22.4■■□□□ 1.18
AC087386.1-201ENST00000553658 AMPHP49418 695 aa22.4■■□□□ 1.18
AC087386.1-201ENST00000553658 EIF4A2Q14240 407 aaKnown RBP22.4■■□□□ 1.18
AC087386.1-201ENST00000553658 KCNH5Q8NCM2 988 aa22.4■■□□□ 1.18
AC087386.1-201ENST00000553658 HOXC9P31274 260 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms